Basic Information

Insect: Lamprigera yunnana
Gene Symbol: -
Assembly: GCA_013368075.1
Location: JABVZV010001401.1:798837-819653[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 37 0.17 2.4 8.9 0.1 1 21 68 88 68 89 0.95

2 37 0.0003 0.0043 17.5 1.9 1 23 163 185 163 185 0.99

3 37 0.14 1.9 9.2 4.0 1 23 190 212 190 212 0.99

4 37 1.6 23 5.8 1.5 1 23 217 239 217 239 0.94

5 37 0.47 6.7 7.5 0.4 1 23 244 266 244 266 0.96

6 37 0.47 6.7 7.5 0.4 1 23 271 293 271 293 0.96

7 37 0.59 8.3 7.2 3.9 1 23 298 320 298 320 0.98

8 37 0.0075 0.11 13.2 2.1 1 23 325 347 325 347 0.99

9 37 0.87 12 6.7 2.6 1 23 352 374 352 374 0.98

10 37 0.1 1.4 9.6 0.9 1 23 406 428 406 428 0.98

11 37 2.5 36 5.2 0.6 1 23 460 482 460 482 0.96

12 37 0.12 1.7 9.4 0.5 1 23 487 509 487 509 0.98

13 37 0.42 5.9 7.7 4.4 1 23 514 536 514 536 0.97

14 37 0.046 0.65 10.7 1.2 1 23 541 563 541 563 0.98

15 37 5.9 83 4.1 4.7 1 23 568 590 568 590 0.97

16 37 0.13 1.9 9.2 2.9 1 23 595 617 595 617 0.98

17 37 4.8 68 4.3 3.6 1 23 622 644 622 644 0.96

18 37 5.7 81 4.1 0.4 1 23 649 671 649 671 0.87

19 37 0.11 1.5 9.5 0.1 1 21 777 797 777 798 0.95

20 37 0.051 0.73 10.5 2.1 1 23 865 887 865 887 0.99

21 37 4.5 63 4.4 0.4 1 23 892 914 892 914 0.78

22 37 0.0062 0.088 13.4 1.1 1 23 919 941 919 941 0.98

23 37 0.023 0.32 11.7 4.5 1 23 946 968 946 968 0.99

24 37 0.15 2.1 9.1 2.4 1 23 973 995 973 995 0.98

25 37 0.16 2.3 9.0 0.9 1 23 1027 1049 1027 1049 0.98

26 37 1.7 24 5.8 0.8 1 23 1054 1076 1054 1076 0.95

27 37 0.002 0.029 14.9 0.7 1 23 1081 1103 1081 1103 0.98

28 37 0.37 5.2 7.8 4.1 1 23 1108 1130 1108 1130 0.99

29 37 0.15 2.2 9.0 0.8 1 23 1135 1157 1135 1157 0.98

30 37 0.22 3.1 8.5 0.3 1 23 1162 1184 1162 1184 0.97

31 37 0.057 0.81 10.4 3.5 1 23 1189 1211 1189 1211 0.99

32 37 0.028 0.4 11.3 4.1 1 23 1216 1238 1216 1238 0.99

33 37 1.2 17 6.3 4.5 1 23 1243 1265 1243 1265 0.98

34 37 0.013 0.19 12.4 4.1 1 23 1270 1292 1270 1292 0.98

35 37 5.3 74 4.2 6.4 1 23 1297 1319 1297 1319 0.97

36 37 0.11 1.6 9.5 6.8 1 23 1324 1346 1324 1346 0.98

37 37 0.0034 0.048 14.3 1.2 1 23 1351 1373 1351 1373 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	37	0.17	2.4	8.9	0.1	1	21	68	88	68	89	0.95
2	37	0.0003	0.0043	17.5	1.9	1	23	163	185	163	185	0.99
3	37	0.14	1.9	9.2	4.0	1	23	190	212	190	212	0.99
4	37	1.6	23	5.8	1.5	1	23	217	239	217	239	0.94
5	37	0.47	6.7	7.5	0.4	1	23	244	266	244	266	0.96
6	37	0.47	6.7	7.5	0.4	1	23	271	293	271	293	0.96
7	37	0.59	8.3	7.2	3.9	1	23	298	320	298	320	0.98
8	37	0.0075	0.11	13.2	2.1	1	23	325	347	325	347	0.99
9	37	0.87	12	6.7	2.6	1	23	352	374	352	374	0.98
10	37	0.1	1.4	9.6	0.9	1	23	406	428	406	428	0.98
11	37	2.5	36	5.2	0.6	1	23	460	482	460	482	0.96
12	37	0.12	1.7	9.4	0.5	1	23	487	509	487	509	0.98
13	37	0.42	5.9	7.7	4.4	1	23	514	536	514	536	0.97
14	37	0.046	0.65	10.7	1.2	1	23	541	563	541	563	0.98
15	37	5.9	83	4.1	4.7	1	23	568	590	568	590	0.97
16	37	0.13	1.9	9.2	2.9	1	23	595	617	595	617	0.98
17	37	4.8	68	4.3	3.6	1	23	622	644	622	644	0.96
18	37	5.7	81	4.1	0.4	1	23	649	671	649	671	0.87
19	37	0.11	1.5	9.5	0.1	1	21	777	797	777	798	0.95
20	37	0.051	0.73	10.5	2.1	1	23	865	887	865	887	0.99
21	37	4.5	63	4.4	0.4	1	23	892	914	892	914	0.78
22	37	0.0062	0.088	13.4	1.1	1	23	919	941	919	941	0.98
23	37	0.023	0.32	11.7	4.5	1	23	946	968	946	968	0.99
24	37	0.15	2.1	9.1	2.4	1	23	973	995	973	995	0.98
25	37	0.16	2.3	9.0	0.9	1	23	1027	1049	1027	1049	0.98
26	37	1.7	24	5.8	0.8	1	23	1054	1076	1054	1076	0.95
27	37	0.002	0.029	14.9	0.7	1	23	1081	1103	1081	1103	0.98
28	37	0.37	5.2	7.8	4.1	1	23	1108	1130	1108	1130	0.99
29	37	0.15	2.2	9.0	0.8	1	23	1135	1157	1135	1157	0.98
30	37	0.22	3.1	8.5	0.3	1	23	1162	1184	1162	1184	0.97
31	37	0.057	0.81	10.4	3.5	1	23	1189	1211	1189	1211	0.99
32	37	0.028	0.4	11.3	4.1	1	23	1216	1238	1216	1238	0.99
33	37	1.2	17	6.3	4.5	1	23	1243	1265	1243	1265	0.98
34	37	0.013	0.19	12.4	4.1	1	23	1270	1292	1270	1292	0.98
35	37	5.3	74	4.2	6.4	1	23	1297	1319	1297	1319	0.97
36	37	0.11	1.6	9.5	6.8	1	23	1324	1346	1324	1346	0.98
37	37	0.0034	0.048	14.3	1.2	1	23	1351	1373	1351	1373	0.99

Sequence Information

Coding Sequence: ATGGATGTCgattataatgaaagttatccaATAAAAACAGAAGTAATTGTAAAGGAAACATTCTCATTTTGcgaaaaatatgaagATCCTGCGAGTGAAGAGCTGAAAACAGAGGCAGTAGATTtcgaagaatcttttaaatgtaaagaagaatgtaattttggtCAACACATTGATATACGTGACACACTCGTACCTCAATATATTtgcaatgaatgtaattttattacaacagaAAAAGACTCGCTACTAgagcatttgaaaattactaaaaatgttaaatatttttgtaaggaatgtaactttaaCACATGGTTTTCATGTTCAATAAATGAACATTTCAAGATACATAACAAGGTTGATTGTAAACgtaatactaaaaaatgtatttttaagacgcaacaaatattttcctTAGCACCACAGTTGAAAAAGCCTTTAAGAGGGAGACTAAAGAAACATGTGAAAATTTATCCTGgtaaagaatataagtgtaaggaatgtgattataaaacacagcggaaacagaatctaagggcacatgtgaaaattcatagtggtgatgaatataagtgtaaagaatgcaattataaaacgcCATTGGAAACttgtctaaagcaacatgtgaaAACTCATACTggtgaaaaatataagtgtacagaatgtgattatacGACGCATTGGAAACAGGGACTAAgtgaacatgtaaaaattcatactggtgatgaatataagtgtaaggaatgtgattataagacagTTTGGAAACAGGGACTAAgcgaacatgtaaaaattcatactggtgatgaatataagtgtaaggaatgtgattataaaacagtttggaaacaGGGACTAAgcgaacatgtaaaaattcatactggtgatgaatataaatgtaaggaatgcaattataaaacgcCGTGGAAAACTTGTCTAAcgaaacatgtgaaaattcatactggtgaaaaatataagtgtgaggaatgtgattatacaaCGCattggaaacagaatctaaaggcgcatatgaaaattcatactggtgaagaatataagtgtaaagaatgcgattataaaacgcCATGGAGAacttgtctaaaggaacatgtcaaaattcatactagtgaaaaatataagtatgaggaatgtgattataaaacatggtTGAAACAGAATCTAATGGCAcacgtgaaaattcatactggtgaagaatataagtgtaaggaatgtgattataaaacccaGTGGAAACAGGATCTAAAggcacatgtgaaaattcatactggtgatgaatataagtgcaaggaatgcgcttataaaacacagtggaaaagttgtataaaggaacatgtgaaaattcatactggtgaagaatataaatgtatggaatgtgattataaaacacggtGGAAACGGAGTATAATggcacatgtgaaaattcatactggtgatgaatataagtgtgaggaatgtgattataaaacccaGTGGAAACAGGATCTAAAggcacatgtgaaaattcatactggtgatgaatataaatgtaaggaatgtgattataaaacgctgCGGAAAacttgtctaaaggaacatgtgaaaattcatactggtgatgaatataagtgtaaggaatgtgattataaaacgcagtggaaacagaatctaaaggcacatgttaaaattcatactggtgataaatataagtgtaaagaatgcgattataaaacacattggaaagcttgtctaaaggaacatgtgaaaattcatactggtgaaaaatataagtgtaaagaatgtgattataagacgcattggaaacagaatctaaaggcacatgtgaaaattcattctggtgatgagtataagtgtaaagaatgcgattataaaacgcaGTGGAGAacttgtctaaaggaacatgtgaaaattcacactggtgaaaaatataagtgtcaggaatgtgattataaaacatggtggaaacagagtctaatgGCACACGTGAAAATCCATagtggtgaagaatataagtgtagtgAATTAGTTCCAATTACCAGTGTTAGAAGTTCACGGAGTTCAAATGCGATCTTGACTCTAAAGCCACAGAGTACAAGGAACTCTGTGCTTAAGGTTGCcattttagtttatataatggATGTCGATTGTAATGAAACTTATCCACTAAAAACGGAATTGATTGTAAAGGAAACATTCTcgttttgtgaaaaatatgaagATTCTGCGACTGAAGAGGTGAAAACAGAGGCGGTAGATTTCGGAGAATGTGTTGGGCGGCACGTCGATGTATGTGACGTACTCATACCTCAATATATTTGCaacgaatgtaattttattacaactgaGAAAGACTCTTTGATAgagcatttgaaaattactaaaaatgttcaaCATTTTTGTAGGGAATGTAACTTTAACACCTGGTTCTCATGTTCGATAGAGgcacatttcaaaattcataacAGGGTTGGTTGtagatatattaataaaacatgtATCTTTAAGACACCACAGTTAAAAACGCCTTTTAGAGGGcgactaaaggaacatgtgaaaattcatactggtgaagaatataagtgtaaggaatgtgattataaaacacaatggaaacgcagtctaaaggaacatatgaaaattcatactggtgaagaatataagtgtaaggaatgtgattataaaacagtttggaaacaGGGAATAATCgatcatgtaaaaattcatactggtgatgaatataagtgtaaggaatgtgattataaaacaaggtGGAGAAAGAGTCTAAAGGCACATATGataattcatactggtgaagaatataagtgtaaggaatgtgattataaaacacggtGGAAAtcttgtctaaaggaacatatgaaaattcatactggtgaagaatataagtgtaatgaatgtgattataaaacgcagtGGAAACACAGTCTAAAggcacatgtaaaaattcattctggtgaagaacataagtgtaaggaatgtgattataaaacacggtggaaattttgtataaaggaacatatgaaaattcatactggtgaagaatataagtgtagggAATGCAACTATAAAACGCCGTGGAAAAGTTATCTAaatgaacatgtaaaaattcatactggtaaaaaatataagtgtaagcaatgtgattataaaacagtttggaaacgGGGAATGATCaatcatgtaaaaattcatactggtgatgaatatgagtgtaaggaatgtgattataaaacacggtGGAGAGACAGTCTAAAggcacatatgaaaattcatactggtgaagactataagtgtaaggaatgtgattataaaacacggtGGAAATCTTGTataaaggaacatatgaaaattcatactggtgaagaatataagtgtacggAATGCAACTATAAAACGCCATGGAAAAGTTATCTAAATGAACATGGAAAAGTTCATACtggtaaaaaatataagtgtaaggaatgtgattataaaacagtttggaaacgGGGACTAATCGATCATGTAAaagttcatactggtgatgaatataagtgtaaagaatgtgattataaaacacgttGGAGAAACTGTCTAAAcgcacatatgaaaattcatactggtgaagaatatacgtgtaaggaatgtgattataaaacacggtGGAAATCTTGTCTAAAGgagcatatgaaaattcatactggcgaagaatataagtgtaaggaatgcgaCTATAGAACGCCGTGGAAacattgtctaaaggaacatgtaaaaattcatactggtgaaagATATAAGTgtgaggaatgtgattataaaacattgtcgaaacataatctaaagaaacatgtgaaAATgcatagtggtgatgaatataagtgtaacgaatgtgattataaaacactgttaAAACATTGCCTAAagaaacatgtgaaaattcattctggtgaagaatataagtgtaacgaatgtgattataaaacgactGGGAAACATTGTCTAAAGGTACATTTGAAATTTCATGCTggcaataaatataagtgtaatgaatgcaaATATACAACACCATTGAAACAAGctctaaagaaacatgtgaaaattcatactggtgttGAAAATGTGCAAGGAATGAGATTACAAAACATTGTGGAAAGGGAGGTTAAATGA
Protein Sequence: MDVDYNESYPIKTEVIVKETFSFCEKYEDPASEELKTEAVDFEESFKCKEECNFGQHIDIRDTLVPQYICNECNFITTEKDSLLEHLKITKNVKYFCKECNFNTWFSCSINEHFKIHNKVDCKRNTKKCIFKTQQIFSLAPQLKKPLRGRLKKHVKIYPGKEYKCKECDYKTQRKQNLRAHVKIHSGDEYKCKECNYKTPLETCLKQHVKTHTGEKYKCTECDYTTHWKQGLSEHVKIHTGDEYKCKECDYKTVWKQGLSEHVKIHTGDEYKCKECDYKTVWKQGLSEHVKIHTGDEYKCKECNYKTPWKTCLTKHVKIHTGEKYKCEECDYTTHWKQNLKAHMKIHTGEEYKCKECDYKTPWRTCLKEHVKIHTSEKYKYEECDYKTWLKQNLMAHVKIHTGEEYKCKECDYKTQWKQDLKAHVKIHTGDEYKCKECAYKTQWKSCIKEHVKIHTGEEYKCMECDYKTRWKRSIMAHVKIHTGDEYKCEECDYKTQWKQDLKAHVKIHTGDEYKCKECDYKTLRKTCLKEHVKIHTGDEYKCKECDYKTQWKQNLKAHVKIHTGDKYKCKECDYKTHWKACLKEHVKIHTGEKYKCKECDYKTHWKQNLKAHVKIHSGDEYKCKECDYKTQWRTCLKEHVKIHTGEKYKCQECDYKTWWKQSLMAHVKIHSGEEYKCSELVPITSVRSSRSSNAILTLKPQSTRNSVLKVAILVYIMDVDCNETYPLKTELIVKETFSFCEKYEDSATEEVKTEAVDFGECVGRHVDVCDVLIPQYICNECNFITTEKDSLIEHLKITKNVQHFCRECNFNTWFSCSIEAHFKIHNRVGCRYINKTCIFKTPQLKTPFRGRLKEHVKIHTGEEYKCKECDYKTQWKRSLKEHMKIHTGEEYKCKECDYKTVWKQGIIDHVKIHTGDEYKCKECDYKTRWRKSLKAHMIIHTGEEYKCKECDYKTRWKSCLKEHMKIHTGEEYKCNECDYKTQWKHSLKAHVKIHSGEEHKCKECDYKTRWKFCIKEHMKIHTGEEYKCRECNYKTPWKSYLNEHVKIHTGKKYKCKQCDYKTVWKRGMINHVKIHTGDEYECKECDYKTRWRDSLKAHMKIHTGEDYKCKECDYKTRWKSCIKEHMKIHTGEEYKCTECNYKTPWKSYLNEHGKVHTGKKYKCKECDYKTVWKRGLIDHVKVHTGDEYKCKECDYKTRWRNCLNAHMKIHTGEEYTCKECDYKTRWKSCLKEHMKIHTGEEYKCKECDYRTPWKHCLKEHVKIHTGERYKCEECDYKTLSKHNLKKHVKMHSGDEYKCNECDYKTLLKHCLKKHVKIHSGEEYKCNECDYKTTGKHCLKVHLKFHAGNKYKCNECKYTTPLKQALKKHVKIHTGVENVQGMRLQNIVEREVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -