Lyun011987.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lamprigera yunnana
Gene Symbol
-
Assembly
GCA_013368075.1
Location
JABVZV010001948.1:1284265-1310765[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 42 0.034 0.48 11.1 2.1 1 23 94 116 94 116 0.99
2 42 0.11 1.6 9.5 2.1 1 23 121 143 121 143 0.98
3 42 2.6 37 5.2 2.4 1 23 148 170 148 170 0.95
4 42 6.5 92 3.9 2.0 1 23 175 197 175 197 0.91
5 42 6.5 92 3.9 2.0 1 23 202 224 202 224 0.91
6 42 2.2 32 5.4 2.1 1 23 229 251 229 251 0.95
7 42 7.6 1.1e+02 3.7 2.4 1 23 256 278 256 278 0.91
8 42 0.017 0.25 12.0 0.7 1 23 283 305 283 305 0.98
9 42 7.6 1.1e+02 3.7 2.4 1 23 310 332 310 332 0.91
10 42 0.029 0.42 11.3 1.8 1 23 337 359 337 359 0.99
11 42 2.2 32 5.4 2.1 1 23 364 386 364 386 0.95
12 42 6.5 92 3.9 2.0 1 23 391 413 391 413 0.91
13 42 0.11 1.6 9.5 2.1 1 23 418 440 418 440 0.98
14 42 0.034 0.48 11.1 2.1 1 23 445 467 445 467 0.99
15 42 0.017 0.24 12.0 0.6 1 23 472 494 472 494 0.98
16 42 0.017 0.25 12.0 0.7 1 23 499 521 499 521 0.98
17 42 0.11 1.6 9.5 2.1 1 23 526 548 526 548 0.98
18 42 0.11 1.6 9.5 2.1 1 23 553 575 553 575 0.98
19 42 0.095 1.3 9.7 1.8 1 23 580 602 580 602 0.98
20 42 0.029 0.42 11.3 1.8 1 23 607 629 607 629 0.99
21 42 7.6 1.1e+02 3.7 2.4 1 23 634 656 634 656 0.91
22 42 7.6 1.1e+02 3.7 2.4 1 23 661 683 661 683 0.91
23 42 2.6 37 5.2 2.4 1 23 688 710 688 710 0.95
24 42 7.6 1.1e+02 3.7 2.4 1 23 715 737 715 737 0.91
25 42 0.11 1.6 9.5 2.1 1 23 742 764 742 764 0.98
26 42 0.043 0.6 10.8 0.4 1 23 809 831 809 831 0.98
27 42 7.6 1.1e+02 3.7 2.4 1 23 849 871 849 871 0.91
28 42 3.6 51 4.7 2.2 1 23 876 898 876 898 0.95
29 42 0.034 0.48 11.1 2.1 1 23 903 925 903 925 0.99
30 42 0.034 0.48 11.1 2.1 1 23 930 952 930 952 0.99
31 42 0.02 0.29 11.8 1.7 1 23 957 979 957 979 0.98
32 42 0.017 0.25 12.0 0.7 1 23 984 1006 984 1006 0.98
33 42 0.0061 0.086 13.4 1.6 1 23 1011 1033 1011 1033 0.98
34 42 2.8 39 5.1 2.5 1 23 1038 1060 1038 1060 0.95
35 42 0.045 0.63 10.7 0.4 1 23 1065 1087 1065 1087 0.98
36 42 0.00025 0.0035 17.8 0.8 1 23 1092 1114 1092 1114 0.99
37 42 0.0054 0.076 13.6 3.8 1 23 1145 1167 1145 1167 0.98
38 42 0.15 2.1 9.1 1.8 1 23 1172 1194 1172 1194 0.98
39 42 0.026 0.36 11.5 2.9 1 23 1199 1221 1199 1221 0.98
40 42 0.049 0.69 10.6 1.9 1 23 1226 1248 1226 1248 0.98
41 42 4.7 66 4.4 1.3 1 23 1253 1275 1253 1275 0.88
42 42 0.003 0.042 14.4 1.4 1 23 1280 1302 1280 1302 0.99

Sequence Information

Coding Sequence
ATGCAGACAACATTACGTGTAAATCTTACATTGAAAACTAGAGTATTGGAATTAGTAGGGGATTCGGCTCCATATATGGATGTCATGTTGATGAGCAATTTTGATAATACGGCTTCACTACTAAACTTTCCTTGCAATTTGGTAAGATTAGAtgTAGATGAATTTGCAGTTATTAATAACAAAGAAGCAATGGCAGATGAGGAGCCCATAATACCCGCACTTTTAAAAAGTGCAGAACCTACAGTTTCATTATCTGCagatttttttggtagtgatgaatataagtgtaaagaatgtgattataaaacagtgtggcaacatagtctaaaggaacacatcaaaattcatacaggtgatgaatataagtgtaaagaatgtgattataaaacagtgtggcaacatagtctaaaggaacatgtcaaaattcatacaggtgatgaatataagtgtaaagaatgtgattataaaacactgtggcaacatagtctaaaggaacacatcaaaattcatacaggtgatgaatatcagtgtaaagaatgtgattataaaacactgtggcaacatagtctaaaggaacatgtcaaaattcatacaggtgatgaatatcagtgtaaagaatgtgattataaaacactgtggcaacatagtctaaaggaacatgtcaaaattcatacaggtgatgaatatcagtgtaaagaatgtgattataaaacactgtggcaacatagtctaaaggaacacatcaaaattcatacaggtgatgaatataagtgtaaagaatgtgattataaaacactgtggcaacatagtctaaaggaacatgtcaaaattcatacaggtgatgaatataagtgtaaagaatgtgattataaaacagtgtggcaaagtagtcttaaggaacatgtcaaaattcatacaggtgatgaatataagtgtaaagaatgtgattataaaacactgtggcaacatagtctaaaggaacatgtcaaaattcatacaggtgatgaatatcagtgtaaagaatgtgattataaaacagtgtggcaacatagtctaaaggaacacatcaaaattcatacaggtgatgaatatcagtgtaaagaatgtgattataaaacactgtggcaacatagtctaaaggaacacatcaaaattcatacaggtgatgaatatcagtgtaaagaatgtgattataaaacactgtggcaacatagtctaaaggaacatgtcaaaattcatacaggtgatgaatataagtgtaaagaatgtgattataaaacagtgtggcaacatagtctaaaggaacatgtcaaaattcatacaggtgatgaatataagtgtaaagaatgtgattataaaacagtgtggcaacatagtctaaaggaacacatcaaaattcatacaggtgatgaatatcagtgtaaagaatgtgattataaaacagtgtggcaaagtagtcttaaggaacatgtcaaaattcatacaggtgatgaatataagtgtaaagaatgtgattataaaacagtgtggcaaagtagtcttaaggaacatgtcaaaattcatacaggtgatgaatataagtgtaaagaatgtgattataaaacagtgtggcaacatagtctaaaggaacatgtcaaaattcatacaggtgatgaatataagtgtaaagaatgtgattataaaacagtgtggcaacatagtctaaaggaacatgtcaaaattcatacaggtgatgaatatcagtgtaaagaatgtgattataaaacagtgtggcaacatagtctaaaggaacatgtcaaaattcatacaggtgatgaatatcagtgtaaagaatgtgattataaaacagtgtggcaacatagtctaaaggaacacatcaaaattcatacaggtgatgaatataagtgtaaagaatgtgattataaaacactgtggcaacatagtctaaaggaacatgtcaaaattcatacaggtgatgaatataagtgtaaagaatgtgattataaaacactgtggcaacatagtctaaaggaacatgtcaaaattcatacaggtgatgaatataagtgtaaagaatgtgattataaaacactgtggcaacatagtctaaaggaacacatcaaaattcatacaggtgatgaatataagtgtaaagaatgtgattataaaacactgtggcaacatagtctaaaggaacatgtcaaaattcatacaggtgatgaatataagtgtaaagaatgtgattataaaacagtgtggcaacatagtctaaaggaacatgtcaaaattcatacaggtgatgaatataagtgtaaagaatgtgattataaaaacagtgttAAATAtacatgtaaagaatgtgattataaaacactgtggcaacatagtctaaaggaacatgtcaaaattcatacaggtgttaAATAtacatgtaaagaatgtgattataaaacagtgtggcaagttagtctaaaggaacacatcaaaattcatacaggtgatgaatataagtgtaaagaatgtgattataaaaacagtgatgaatataagtgtaaagaatgtgattataaaacactgtggcaacatagtctaaaggaacatgtcaaaattcatgcaggtgttAAATAtacatgtaaagaatgtgattataaaacactgtggcaacatagtctaaaggatcacataaaaattcatacaggtgatgaatataagtgtaaagaatgtgattataaaacagtgtggcaacaTAGTCtcaaggaacacatcaaaattcatacaggtgatgaatataagtgtaaagaatgtgattataaaacagtgtggcaacatagtctaaaggaacacatcaaaattcatacaggtgatgaatataagtgtaaagaatgtgactataaaacagtgcaaaaacgatatataaaggaacatgtcaaaattcatacaggtgatgaatataagtgtaaagaatgtgattataaaacagtgtggcaaagtagtcttaaggaacatgtcaaaattcatataggtgatgaatatcagtgtaaagaatgtgattataaaacggtgtcgAAAAGAAGGCTAaaggaacacgtcaaaattcatacaggtgatgaatataagtgtaaagaatgtgattataaaacactgtggcaacatagtctaaaggatcacatcaaaattcatacaggtgatgaatataagtgtaatgaatgtgattataaaacagtgtggcaagttagtctaaaggaacatctcaaaattcattcgggtgatgaatataagtgtaaagaatgtgattataaaacagtgcggcaaggtagtttaaaggaacatgtcaaaattcatacaggtgatgaatataagtgtaaagaatgtgattataaaaacagtgatgaatataagtgtaaagaatgtgattataaaaacagtgttaAATAtacatgtaaagaatgtgattataaaacagtgtcgcAATGTAGTCTAAAGcgacatgaaaaaattcatgcTGGTGTTAATTAtacgtgtaaagaatgtgattataaaacagtatggcaacatagtctaaaggaacatgtcaaaattcatgcaggtgatgaatataactgcaaagaatgtgattataaaacagtgtcgcaacgttgtctaaaggaacatgtcaaaattcacacaggtgatgaatataagtgtaaagaatgtgattataaaacagtgtggcaaaataatctaaagaaacattcaaaaattcatacaggagatgaatataagtgtaaagaatgtgattataaaacactgtggcAAAGTAGGCTAAaggaacatttgaaaattcatacaggtgatgaatataagtgcaaagaatgtgattatatgacagtgtggaaaagtagtcttaaaaaacatttaaaaattcatacagtggattccataccaacaagttgtattcaactagcgaaggaacaaattattaagtatagcgattccaaatacaatatcaacgattttaagactgggggttgcgaaacaatgttacttaatcaaagaatttattatttaaataaatctaaaagtaaatggatcagtgtaggattgtacccaccgttcgaattcgcttctgtcgtGAAGATATTCAGGAGGTCTAagaagcaatacgttatatttaaagaagaggagtgggtacaatttcacgaacaacgagaaaatattaataagtattttcagacttgtgatatgatgtggaaaccaaggcaaattggttcaaaaacactaacgtttgagatgatcaaagaaaagaaaattttaaggatTGAAGATGTGTCTGgaaacgaaatttatttaggttgggaatccgTGTCGGAAGTATGGTCATTAAAATCGattctcagttatagattaagttattcttccggtagtaactttaaacatttttatgacgacgtaataagggctgtggcagaaatgtcaggagatgtgaaaataaatatatacaatatcgtcaaccgactctctgaaaaatttgatgatgtgtgttgtacgTTAGAGATcttcctctttatgccggaaaaggcactatttgatgtacaacttgaaaaacgtattcaagaacaagaaatacagtttattaaaaagatgtggatgctgtatgcccaagagcattggactaaagcttttgatttaaaatcggcattagaacgtttatatgaagaactcggtgccatagaatttgatgctgatcatgaagcaatttatgggatggaaagatattacacggtccaacaatgtgcagagcttcgagataaatataagattggaaggaaacgacaTCGGACTACAACACTTTTTAgatacaataacaaatatataaaagactgtagtgattcggatacatcatcataCTCACCCGACGAGAAGGAATGTAAagaagcagtggaacaaaatggtgaagagacgacagaagaagaagaagaatcaagaaaagtgaagatggaagaaatacaaaatctttttcataatttgaaaatagaTGTCGAAATTGTTTCTACGAAGTtcgatagtaaaaaaaatatttcgcaAAGACCATTGTCGGGATTATctgataaatattcaaaaggtataaaaatacTGTCAAGTTATCTTAAGGggcacttttgtttcaaatgtttacaaatacagctgttttctaataatttagaagaatacttgtaa
Protein Sequence
MQTTLRVNLTLKTRVLELVGDSAPYMDVMLMSNFDNTASLLNFPCNLVRLDVDEFAVINNKEAMADEEPIIPALLKSAEPTVSLSADFFGSDEYKCKECDYKTVWQHSLKEHIKIHTGDEYKCKECDYKTVWQHSLKEHVKIHTGDEYKCKECDYKTLWQHSLKEHIKIHTGDEYQCKECDYKTLWQHSLKEHVKIHTGDEYQCKECDYKTLWQHSLKEHVKIHTGDEYQCKECDYKTLWQHSLKEHIKIHTGDEYKCKECDYKTLWQHSLKEHVKIHTGDEYKCKECDYKTVWQSSLKEHVKIHTGDEYKCKECDYKTLWQHSLKEHVKIHTGDEYQCKECDYKTVWQHSLKEHIKIHTGDEYQCKECDYKTLWQHSLKEHIKIHTGDEYQCKECDYKTLWQHSLKEHVKIHTGDEYKCKECDYKTVWQHSLKEHVKIHTGDEYKCKECDYKTVWQHSLKEHIKIHTGDEYQCKECDYKTVWQSSLKEHVKIHTGDEYKCKECDYKTVWQSSLKEHVKIHTGDEYKCKECDYKTVWQHSLKEHVKIHTGDEYKCKECDYKTVWQHSLKEHVKIHTGDEYQCKECDYKTVWQHSLKEHVKIHTGDEYQCKECDYKTVWQHSLKEHIKIHTGDEYKCKECDYKTLWQHSLKEHVKIHTGDEYKCKECDYKTLWQHSLKEHVKIHTGDEYKCKECDYKTLWQHSLKEHIKIHTGDEYKCKECDYKTLWQHSLKEHVKIHTGDEYKCKECDYKTVWQHSLKEHVKIHTGDEYKCKECDYKNSVKYTCKECDYKTLWQHSLKEHVKIHTGVKYTCKECDYKTVWQVSLKEHIKIHTGDEYKCKECDYKNSDEYKCKECDYKTLWQHSLKEHVKIHAGVKYTCKECDYKTLWQHSLKDHIKIHTGDEYKCKECDYKTVWQHSLKEHIKIHTGDEYKCKECDYKTVWQHSLKEHIKIHTGDEYKCKECDYKTVQKRYIKEHVKIHTGDEYKCKECDYKTVWQSSLKEHVKIHIGDEYQCKECDYKTVSKRRLKEHVKIHTGDEYKCKECDYKTLWQHSLKDHIKIHTGDEYKCNECDYKTVWQVSLKEHLKIHSGDEYKCKECDYKTVRQGSLKEHVKIHTGDEYKCKECDYKNSDEYKCKECDYKNSVKYTCKECDYKTVSQCSLKRHEKIHAGVNYTCKECDYKTVWQHSLKEHVKIHAGDEYNCKECDYKTVSQRCLKEHVKIHTGDEYKCKECDYKTVWQNNLKKHSKIHTGDEYKCKECDYKTLWQSRLKEHLKIHTGDEYKCKECDYMTVWKSSLKKHLKIHTVDSIPTSCIQLAKEQIIKYSDSKYNINDFKTGGCETMLLNQRIYYLNKSKSKWISVGLYPPFEFASVVKIFRRSKKQYVIFKEEEWVQFHEQRENINKYFQTCDMMWKPRQIGSKTLTFEMIKEKKILRIEDVSGNEIYLGWESVSEVWSLKSILSYRLSYSSGSNFKHFYDDVIRAVAEMSGDVKINIYNIVNRLSEKFDDVCCTLEIFLFMPEKALFDVQLEKRIQEQEIQFIKKMWMLYAQEHWTKAFDLKSALERLYEELGAIEFDADHEAIYGMERYYTVQQCAELRDKYKIGRKRHRTTTLFRYNNKYIKDCSDSDTSSYSPDEKECKEAVEQNGEETTEEEEESRKVKMEEIQNLFHNLKIDVEIVSTKFDSKKNISQRPLSGLSDKYSKGIKILSSYLKGHFCFKCLQIQLFSNNLEEYL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-