Basic Information

Insect: Lamprigera yunnana
Gene Symbol: RREB1
Assembly: GCA_013368075.1
Location: JABVZV010000702.1:915752-992153[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00045 0.0064 17.0 0.4 1 23 97 119 97 119 0.99

2 15 0.001 0.014 15.9 0.3 1 23 132 154 132 154 0.98

3 15 4e-05 0.00057 20.3 3.4 1 23 160 182 160 182 0.98

4 15 0.15 2.1 9.1 3.3 2 23 292 314 292 314 0.94

5 15 0.11 1.6 9.5 0.8 1 20 362 381 362 383 0.95

6 15 0.36 5.1 7.9 0.1 1 23 507 529 507 529 0.96

7 15 4.1e-05 0.00057 20.3 0.8 1 23 538 560 538 560 0.99

8 15 0.0041 0.059 14.0 3.1 1 23 566 589 566 589 0.97

9 15 0.0015 0.021 15.4 1.4 1 23 993 1016 993 1016 0.96

10 15 0.0055 0.079 13.6 0.4 2 23 1247 1268 1246 1268 0.97

11 15 0.63 8.9 7.1 6.3 1 23 1274 1297 1274 1297 0.97

12 15 0.78 11 6.8 3.6 1 20 1325 1345 1325 1349 0.94

13 15 0.18 2.5 8.8 1.0 1 23 1410 1433 1410 1433 0.94

14 15 0.083 1.2 9.9 0.4 3 23 1481 1501 1479 1501 0.93

15 15 0.037 0.52 11.0 7.8 1 23 1507 1529 1507 1529 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00045	0.0064	17.0	0.4	1	23	97	119	97	119	0.99
2	15	0.001	0.014	15.9	0.3	1	23	132	154	132	154	0.98
3	15	4e-05	0.00057	20.3	3.4	1	23	160	182	160	182	0.98
4	15	0.15	2.1	9.1	3.3	2	23	292	314	292	314	0.94
5	15	0.11	1.6	9.5	0.8	1	20	362	381	362	383	0.95
6	15	0.36	5.1	7.9	0.1	1	23	507	529	507	529	0.96
7	15	4.1e-05	0.00057	20.3	0.8	1	23	538	560	538	560	0.99
8	15	0.0041	0.059	14.0	3.1	1	23	566	589	566	589	0.97
9	15	0.0015	0.021	15.4	1.4	1	23	993	1016	993	1016	0.96
10	15	0.0055	0.079	13.6	0.4	2	23	1247	1268	1246	1268	0.97
11	15	0.63	8.9	7.1	6.3	1	23	1274	1297	1274	1297	0.97
12	15	0.78	11	6.8	3.6	1	20	1325	1345	1325	1349	0.94
13	15	0.18	2.5	8.8	1.0	1	23	1410	1433	1410	1433	0.94
14	15	0.083	1.2	9.9	0.4	3	23	1481	1501	1479	1501	0.93
15	15	0.037	0.52	11.0	7.8	1	23	1507	1529	1507	1529	0.98

Sequence Information

Coding Sequence: atgttgGAACTTAATTTCGAGATGCAAGGTATTGTTTACTTGCCTGATGGTCATCTTCAAACTGGTTCGTCGCCACCGTACAGGAATATCGttcCTCAAGCGAATATGGACTTATCGTTAGAGCTAGAATCAAAAACCAAAGAATATTTAAGAAACCAAAGTAATCAAAGCGATTCCGGTATATTATCGGGTACCGCCAATTCAACAATTATGGACGTAGATCGATTAAATCGTTCGGAAAACGAAGATACCGATAGCAGAAGTAATAATAGCACACCCGATCGTAAATACGTATGTCCAATTTGCGAAATTATGCTAACGTCTCAACACGAGTTTACTATCCATATCAGATCTCACAATAATGAAACGGAAGTGCAGGAATCAGAAAAAGGCTTCACATGTCGTATTTGTTATAAGGTACTAAGTTCCAGCGCAAGTTTAGATAGACATATGTTAATACACAGCGGAGAGAGACCTTTTACATGCAAATATTGTGGGGATACATTTACGACTAACGGAAATATGCATAGACATATGCGAATTCACACCATCAAATGCGAAAATTATGAATCAGACGAAAGCTCAGACAGCGGTACCAGCAATAAATCGAAAATggaatacaataataataaaattagtacaaAAAATAACGACAATAAAAATTGCGTCGATACCAAAAATGATACGAAACGTAAATGCTCAGATACCGACTACGAAGAACCCTATAAAAAAGCCCGCATTAAACTCGAAGACGCTTTTGGAGAAATCGACAAACGTAGTAGCTTCAGCTGCTCTGTTTGCGAACGCGACGACTTCAACACCATCGAAATGCTACAAATTCATCTAGAAGACAATCATCCCGACTACCCCGCACAATGCGATAAATGCAGCCACACCTTTAAAAACACAAAGCTACTCAACGAGCACAAAACGATAGTGCACGTCAACGAAGACAGATTTCAAAGGAATTCCGTCGTTGGTTTCAAAGATTTAACGTTCGTCGACTTTTCGAGCCAAAAATTTCCTTACATCGCGAAATACGAATGCGAAAAGAATTTGCATAAAGTATCGAGCGGATTGAGATTTCAGTGCGATAAATGTTCGAGGGCTTTTCCTTGCTCCAGCTCTCTTGAGATACACCAATCGGATTGTACCGTCGGTTTAGATCTAACCGTTAAACATTCTATGAATAGGACATCGAACGTAGAAAAGGATCTACGACGAAACGACTTTTTTGCCAAATTAGATTTGCAAAACAAACACGAACATTTACATGTTCCCGATGCATCTCACCACGTCTTGCCTCCCTCAGATGGCAAAGATTTAGCCGACATACAGTCGATAATTTCCATGACAACGAACGGCACcatattacaacaattacatacaAAATCCAATGACTTGCACCCCGCTTTAAGGTCGTATAATGAAATCGAAGATAATCAGAAACAAGAAAACGAAGAAGAATTGCAAGATTTATTTGCGGCCGAATTTAGGAAAATGAAAGTACGCGGGGAATTTCCTTGTCGCCTTTGTACAGCGGTGTTTCCTAATCTACGCGCATTGAAAGGACACAACCGTGCCCATTTAACCGGCAACAGCAACGGAATCTACAGATGCAACATGTGTCCTCATTCTTCTATCGACAAAGCTGCTCTTATAAGGCACATGAGAACTCATAATGGTGATCGTCCATACGAATGTTCACTATGTAACTACGCATTCACGACCAAAGCTAATTGCGAACGACATTTAAGAAATCGTCACGCCAAAAGCACAAGAGAAGAAGTGAAAAAGTCAATTATTTATCATCCATCTGAGGATCCTAGCAACGAAGAAATCACCAAAATTTTAGCGCGAGAAGATAAAGTACCTCTTTTATCAAAAGAAGAAATCGTCAAACCAGATAACTACTTACCAACACCAGATCTTCCTAGTTTGCTACCCGACAAGGTGAAAAATCCAGAAttaggtttattaaatttaaataattcccattttaaatataacaacCTACATAGTATGAACAGAATCGATTTTAAAGATATAGTACGCAAAGACAACGTAACAATCTTAAAAGACGCCCCTGTAAACGATCGCTTACAACCTTCCGTACCTCCATTTAACTTTTCACCCAAAATTGCGAACGTCTCTACACCTCATAAATCGACAAAAATACACGTGAAGAATTTGGAATCGTTGCAGCATTCAGATTACGACAGTTCCAAATCATTCGAACAAGCCGAAGATTCCTTAAACGAGGACGTTAAAGAAGAATCTATGGAAATGGCTTTAGATCTAAGTACAAAAAAGACAAAAGTTATAGTAGAGAAAGACACCCCGGAAATTGAAGAAGTGCCAGAGGACTTATCTAGAAAAGCTGTAGAGCCTCCTCAAAACGTAAGCGACATCTTAGCGAGGCAACTTCTAAAGAACACCCCAAAAATTGATCCCACCAGTTTGTACGCTTCGCAGCTTGCATTTTATCGAAACGGATTTCCCGGCTTACACGGTCTACCGGCTTGGCCCTTCCAGTTGAACCCGCTATTTTTTCAATCTCTCTCTTCGCCGCTACTACAGCAAGATCCTCAAGAAATCAAGGAGCGCTTACAAAGGCTACAATTATGCGGCGGCGGAATGATTATGGATAATTTTACGgagcgttttaaaaattttcagcaACAACCTTTTCCAAATCCAGCTTTGAACGcttacaacaattttaaaataaataattccaaaatggAAGTGAAATCACACGAAGCTAAATTTCAAAGTCCAATTGAAAACGAAGACGTCAAGCCCCTAAGTTTATCTACAGACTCAAACTTACCTGATAACTTAACAAAGATGCAAAGCCCAGTAGCAACATCGAAACAGGAACAAATATCTTCACCGAACTCCGTTAAAATGGTGATCAAGAATGGAGTTTTAATGCCCAAGCAGAAGCAAAGACGTTATCGTACCGAAAGACCATTTTCTTGCGAATACTGCTCTGCGCGATTTACTTTAAGATCGAACATGGAGCGCCATATTAAGCAGCAACATCCACAATACTGGGCTCAACGACAAAGATCAAATATTGGCGGAGGAAATCGAAAATCCAGCGGTTCCAATCatagaaataacttcaacagTGTAAACATTCCGAATTACGACCCTGAAATAAAATCGGAATACGACGATATTAAAGATAATCATATATCGGAGAAGATTAAATATGTGATACTAGCTCAACATCTAAAAGCCAGCCAAAACTACAAATCGGCcaataaacatattaaacataatgaagatgaagaagaccATCCACTAATCATCGACGAAAAAGATGATccaattaaaaacgaaaatttattaattgcgaAAGAAGCAGACCCAGACCATTGCGCGAATAACATTTCGAGGGCCAGTGAGacacaagaaaataaactttCCGAATTGGACTGTAACCAACCGAGTGTTGCAAAAAGTGAAGATGCGCAAGACTTGGTTCCTGTATCTCGCCTGCTCGATAACGCTTCACAGCAACCATTTAAGGAGTACTTTCGGAGAGAAACTGAGAGCCGTGAGGGAGGTATAAGTGAAGAAGACGAAGAGGGATTGGTGGCAAGCAGTAGCACAAGTGATGGGAATAATTCTGGGACGGATGAAAATAAgtctGAATATGAAAACAACAGTACATCTCAAGTTCCTGCCAAGAAAAAGTCAGCTTATTCTTTAGCACCCAATCGTGTGAGCTGCCCATACTGTCAACGTAAATTTCCATGGACTTCGTCATTGCGACGACACGTATTAACTCACACCGGACAAAAACCGTTTAAATGTAGTCATTGTCCGTTACTCTTTACAACGAAATCTAATTGTGATCGTCACTTACTACGAAAGCATGGAAATTCTGCTAGTGCCATAAATAACGAAGCGTCTAATTCGAATGCAAATTATATGATGCGCAACGTACCAGAGCGCCCATACAAATGTGCGAATTGTCCAAGTAGCACATTTTCAACTTACTCAAATCTTAAAAAGCATATCAGTTGTAAACATTCTCACCAAGGGACGCAAAGTGATGATGCTCGTTCCCAAATTTCCACTGGTTACGAGGCTGGTAGCTCCGAAGATGAAAAAATGCCACATCCTGACCAAAAAAAGGAATGGGATAAACTAGTTAATAAACCAGCTGGAGCGGAAGTACAAAATCCTCATATGCAAAATTCTGAACTGCCATTCAAGTGCCATCTATGTGATAATTCGTTTGGAGACAGAAACGAAGCTTTAGATCATATCAAAGACAGGCACTATTCCGAATTTAAGTTGCTATTATCTAAAAATGCTCTCGATACCAATGCAATAACTCCAGATGAGAATCCCAATCATGATGACAATGAAGATAATGAAGTAAGAGGAAAATTTCCTGATTATGCTAATAGAAAGGTTATATGTGCGTTCTGCATGAGACGATTTTGGTCAGCGGAAGATCTCAGACGACACATGCGAACACACACTGGAGAACGTCCGTTTAGTTGTGACATCTGTCATCGCAGGTTTACTTTAAAACATAGTATGTTGCGGCATCGTAAAAAGCACAATGTTACTTTTGATATTGATAATTTAAACAGCGACGAAGATGTTAATAATGTTAATTCGTCTGCAGTGTTTAATCAATTTATTAAAGGTAACAACAACAATTCGGTAAGTAAAATTATAGACAAAACTGATGAATCTGATGGTGCAGAAGGTAGCGATTTGATAAGTAATTTATTAGGTATTAGAGATCGTTCTATTATCGATCAAGTATTAACGTCTTCTGCTGATGACGCTGCTAAATTATTAGGGGTTAAGGGTGGTGATCATGAATAG
Protein Sequence: MLELNFEMQGIVYLPDGHLQTGSSPPYRNIVPQANMDLSLELESKTKEYLRNQSNQSDSGILSGTANSTIMDVDRLNRSENEDTDSRSNNSTPDRKYVCPICEIMLTSQHEFTIHIRSHNNETEVQESEKGFTCRICYKVLSSSASLDRHMLIHSGERPFTCKYCGDTFTTNGNMHRHMRIHTIKCENYESDESSDSGTSNKSKMEYNNNKISTKNNDNKNCVDTKNDTKRKCSDTDYEEPYKKARIKLEDAFGEIDKRSSFSCSVCERDDFNTIEMLQIHLEDNHPDYPAQCDKCSHTFKNTKLLNEHKTIVHVNEDRFQRNSVVGFKDLTFVDFSSQKFPYIAKYECEKNLHKVSSGLRFQCDKCSRAFPCSSSLEIHQSDCTVGLDLTVKHSMNRTSNVEKDLRRNDFFAKLDLQNKHEHLHVPDASHHVLPPSDGKDLADIQSIISMTTNGTILQQLHTKSNDLHPALRSYNEIEDNQKQENEEELQDLFAAEFRKMKVRGEFPCRLCTAVFPNLRALKGHNRAHLTGNSNGIYRCNMCPHSSIDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHAKSTREEVKKSIIYHPSEDPSNEEITKILAREDKVPLLSKEEIVKPDNYLPTPDLPSLLPDKVKNPELGLLNLNNSHFKYNNLHSMNRIDFKDIVRKDNVTILKDAPVNDRLQPSVPPFNFSPKIANVSTPHKSTKIHVKNLESLQHSDYDSSKSFEQAEDSLNEDVKEESMEMALDLSTKKTKVIVEKDTPEIEEVPEDLSRKAVEPPQNVSDILARQLLKNTPKIDPTSLYASQLAFYRNGFPGLHGLPAWPFQLNPLFFQSLSSPLLQQDPQEIKERLQRLQLCGGGMIMDNFTERFKNFQQQPFPNPALNAYNNFKINNSKMEVKSHEAKFQSPIENEDVKPLSLSTDSNLPDNLTKMQSPVATSKQEQISSPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEYCSARFTLRSNMERHIKQQHPQYWAQRQRSNIGGGNRKSSGSNHRNNFNSVNIPNYDPEIKSEYDDIKDNHISEKIKYVILAQHLKASQNYKSANKHIKHNEDEEDHPLIIDEKDDPIKNENLLIAKEADPDHCANNISRASETQENKLSELDCNQPSVAKSEDAQDLVPVSRLLDNASQQPFKEYFRRETESREGGISEEDEEGLVASSSTSDGNNSGTDENKSEYENNSTSQVPAKKKSAYSLAPNRVSCPYCQRKFPWTSSLRRHVLTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNSASAINNEASNSNANYMMRNVPERPYKCANCPSSTFSTYSNLKKHISCKHSHQGTQSDDARSQISTGYEAGSSEDEKMPHPDQKKEWDKLVNKPAGAEVQNPHMQNSELPFKCHLCDNSFGDRNEALDHIKDRHYSEFKLLLSKNALDTNAITPDENPNHDDNEDNEVRGKFPDYANRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICHRRFTLKHSMLRHRKKHNVTFDIDNLNSDEDVNNVNSSAVFNQFIKGNNNNSVSKIIDKTDESDGAEGSDLISNLLGIRDRSIIDQVLTSSADDAAKLLGVKGGDHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -