Basic Information

Insect: Lamprigera yunnana
Gene Symbol: -
Assembly: GCA_013368075.1
Location: JABVZV010000391.1:876528-884934[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 35 0.44 6.2 7.6 0.1 1 21 65 85 65 86 0.95

2 35 0.36 5 7.9 1.7 1 23 148 170 148 170 0.97

3 35 0.021 0.29 11.8 1.0 1 23 175 197 175 197 0.98

4 35 0.17 2.4 8.9 3.1 1 23 202 224 202 224 0.98

5 35 0.067 0.95 10.2 0.7 1 23 229 251 229 251 0.98

6 35 0.45 6.3 7.6 2.4 1 23 256 278 256 278 0.96

7 35 0.037 0.53 11.0 1.8 1 23 283 305 283 305 0.98

8 35 0.17 2.4 8.9 3.1 1 23 310 332 310 332 0.98

9 35 0.019 0.27 11.9 1.0 1 23 337 359 337 359 0.98

10 35 0.017 0.24 12.1 1.9 1 23 364 386 364 386 0.98

11 35 0.24 3.3 8.4 1.7 1 23 391 413 391 413 0.98

12 35 0.0012 0.017 15.7 2.3 1 23 418 440 418 440 0.98

13 35 0.46 6.5 7.5 1.6 1 23 445 467 445 467 0.98

14 35 0.037 0.53 11.0 1.8 1 23 472 494 472 494 0.98

15 35 0.18 2.5 8.8 0.7 1 23 499 521 499 521 0.98

16 35 0.041 0.59 10.8 3.5 1 23 526 548 526 548 0.98

17 35 0.046 0.65 10.7 0.5 1 23 553 575 553 575 0.98

18 35 0.58 8.3 7.2 4.9 1 23 580 602 580 602 0.98

19 35 0.13 1.8 9.3 2.1 1 23 607 629 607 629 0.98

20 35 0.096 1.4 9.7 1.7 1 23 634 656 634 656 0.98

21 35 0.033 0.46 11.2 0.0 1 21 794 814 794 815 0.95

22 35 0.0021 0.03 14.9 1.4 1 23 903 925 903 925 0.99

23 35 0.081 1.2 9.9 0.8 1 23 930 952 930 952 0.98

24 35 0.12 1.6 9.4 4.4 1 23 957 979 957 979 0.98

25 35 0.14 1.9 9.2 1.6 1 23 984 1006 984 1006 0.98

26 35 0.044 0.62 10.7 0.4 1 23 1038 1060 1038 1060 0.98

27 35 1.5 22 5.9 4.1 1 23 1065 1087 1065 1087 0.97

28 35 0.044 0.62 10.7 0.9 1 23 1092 1114 1092 1114 0.98

29 35 0.34 4.8 8.0 2.9 1 23 1119 1141 1119 1141 0.98

30 35 0.064 0.91 10.2 2.1 1 23 1146 1168 1146 1168 0.98

31 35 0.044 0.62 10.7 3.2 1 23 1173 1195 1173 1195 0.99

32 35 4.8e-05 0.00068 20.1 0.6 1 23 1200 1222 1200 1222 0.99

33 35 0.16 2.3 9.0 1.9 1 23 1227 1249 1227 1249 0.98

34 35 3.7e-05 0.00052 20.4 0.8 1 23 1254 1276 1254 1276 0.99

35 35 0.021 0.29 11.8 1.5 1 23 1281 1303 1281 1303 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	35	0.44	6.2	7.6	0.1	1	21	65	85	65	86	0.95
2	35	0.36	5	7.9	1.7	1	23	148	170	148	170	0.97
3	35	0.021	0.29	11.8	1.0	1	23	175	197	175	197	0.98
4	35	0.17	2.4	8.9	3.1	1	23	202	224	202	224	0.98
5	35	0.067	0.95	10.2	0.7	1	23	229	251	229	251	0.98
6	35	0.45	6.3	7.6	2.4	1	23	256	278	256	278	0.96
7	35	0.037	0.53	11.0	1.8	1	23	283	305	283	305	0.98
8	35	0.17	2.4	8.9	3.1	1	23	310	332	310	332	0.98
9	35	0.019	0.27	11.9	1.0	1	23	337	359	337	359	0.98
10	35	0.017	0.24	12.1	1.9	1	23	364	386	364	386	0.98
11	35	0.24	3.3	8.4	1.7	1	23	391	413	391	413	0.98
12	35	0.0012	0.017	15.7	2.3	1	23	418	440	418	440	0.98
13	35	0.46	6.5	7.5	1.6	1	23	445	467	445	467	0.98
14	35	0.037	0.53	11.0	1.8	1	23	472	494	472	494	0.98
15	35	0.18	2.5	8.8	0.7	1	23	499	521	499	521	0.98
16	35	0.041	0.59	10.8	3.5	1	23	526	548	526	548	0.98
17	35	0.046	0.65	10.7	0.5	1	23	553	575	553	575	0.98
18	35	0.58	8.3	7.2	4.9	1	23	580	602	580	602	0.98
19	35	0.13	1.8	9.3	2.1	1	23	607	629	607	629	0.98
20	35	0.096	1.4	9.7	1.7	1	23	634	656	634	656	0.98
21	35	0.033	0.46	11.2	0.0	1	21	794	814	794	815	0.95
22	35	0.0021	0.03	14.9	1.4	1	23	903	925	903	925	0.99
23	35	0.081	1.2	9.9	0.8	1	23	930	952	930	952	0.98
24	35	0.12	1.6	9.4	4.4	1	23	957	979	957	979	0.98
25	35	0.14	1.9	9.2	1.6	1	23	984	1006	984	1006	0.98
26	35	0.044	0.62	10.7	0.4	1	23	1038	1060	1038	1060	0.98
27	35	1.5	22	5.9	4.1	1	23	1065	1087	1065	1087	0.97
28	35	0.044	0.62	10.7	0.9	1	23	1092	1114	1092	1114	0.98
29	35	0.34	4.8	8.0	2.9	1	23	1119	1141	1119	1141	0.98
30	35	0.064	0.91	10.2	2.1	1	23	1146	1168	1146	1168	0.98
31	35	0.044	0.62	10.7	3.2	1	23	1173	1195	1173	1195	0.99
32	35	4.8e-05	0.00068	20.1	0.6	1	23	1200	1222	1200	1222	0.99
33	35	0.16	2.3	9.0	1.9	1	23	1227	1249	1227	1249	0.98
34	35	3.7e-05	0.00052	20.4	0.8	1	23	1254	1276	1254	1276	0.99
35	35	0.021	0.29	11.8	1.5	1	23	1281	1303	1281	1303	0.99

Sequence Information

Coding Sequence: ATGAACGTAGAATATAACGAACGTCCAATAAAAATGGAAGTAATTCTACATGAAACATATTCATTTTGTGGGAAACATGAAAATTATGGAAATGAGGAATTGAAAACAGAGCCAGTAAACTttgaagaatcttttaaatgggaAGAAAGTAATTTCGAGAAGTACATAAATATACATGTACCAGTAGatcaatatatttgtaatgagtgtaattttaTGACAACAGAGAAAGGTTTTCtaatagaacatttgaaaattaatgaaaatgttcaatatttttgtaaggaatgtgattttaaaaccatGTTGGAGTGTTCGATAAAAGAACATTTGCAGGCTCACAACAGAATGGGTGATAGATATATTACCAAGCAATGTACAATTAAGGTGCCACTAACTCCCCCTTTACCACTACAATTGGAAACTCCGGACATTGCTGAATATATTTGtagtaaatgtgattataaaacacgatGGAAACAGCTTTTACAAACAcatactaaaattcataaagatgatggatataaatgtaaggaatgtgattataaaacacggtGGAAACAGCTCTTAAAAGCACACGCaagaattcatacaggcgatgaatataaatgtaacgaatgtaattataaaacattgcagAAAGCTTGTTTACAAGCACAtactaaaattcatacaggtgaagaatataagtgtaagggatgtgattataaaacaccatggaaacagctTTTAAAAGCACAtactaaaattcatacaggtgatgaatataggtgtaaagagtgtgattataaaacacggtGGAAACAGCTTTtgaaaacacataataaaattcatacaggtgatgaatataagtgtaaggaatgtgattataaaacacggtggaaacagagtttaaaccaacatgtaaaaattcacactggtgacgaatataaatgtaacgaatgtaattataaaacattgcaaAAAGCTTGTTTACAAGCTCATACTAAAATTCATAGAGGTGAtcaatataagtgcaaagaatgtgattataaaacatcatggaAACAGCTCTTAAAAGCACATgagagaattcatacaggtgatgaatataagtgcaatgagtgtgactataaaacattgCAGAAAGCTTGTTTACAAgcacatattaaaattcatacaggtgatcaatataagtgtacggaatgtaattataaaacaccatggaaacagcttttaaaaacacatactaaaattcatacaggtgatgtatataaatgtaaggagtgtgattataaaacacgatCAAAGCAGAGTTTAAACCAACACgggaaaattcacactggtgatgaatataagtgtaacgaatgtagttataaaacaccgtggaaacagctattaaaaacacatactaaaattcataaaaatgatgaatataagtgtaaggaatgtgattataaaacacggtggaaacagagtttaaaccaacatgtgaaaattcacactggtgacgAATACAAATGTaatcaatgtgattataaaacaccatggaagcagCTCTTAAAAGCACATGAGAGACTTCATagaggtgatgaatataagtgcaatgaatgtgattataaaacattgcagAAATCTTGTTTACAAGCGCAtactaaaattcatacaggtgatcaatataagtgtaaggaatgtgattataaaacaccatggaaacagctCTTAAAAGCACATGAGAgaattcatacgggtgatgaatataagtgcaccaaatgtgattataagactTTGCAGAAAACCTGTTTACAAGCGCAtactaaaattcatacaggtaatcaatataagtgtaaggaatgtgattataaaacaccatggaaacagcttttaaaaaaacatactaagcttcatacaggtgatatatataaatgtaaggaatgtgattatacaaCACAGTGGAAACAGAGTTTAAagcaacatgtgaaaattcatattgatgacgaatataagtgtaatgaatgtgattataaaacactatggAAACAGCTGTTAATAGTAAATGAgcaaattcatacaggtgatgaatataagtacAACGAATATGATTCCGAAACATTGCCGGAAATTAATTTACCAGCACATACTACATACACAGTTGTATCTGCTGCTTGTTCTATCAGTACTATAATTGTTACTCCTACTAAAGAAAGTTACATGATGCAGATGGATTATAATGAATGTTGTCCAATAAAACCGGAAATTTCGTTTTGTGGGAAACACGAAGTTGTAGATTATGAGaatgaagaatttaaaatagaGCCGGTAAACTtcgaagaatcttttaaatgggaAGAAGATAATTTGGAGGAATACATGAATATTCATGCGGTATCAGTAcatcaatatatttgtaatgagtgtaattttaTGACAACAGAGAAAGATTCTCTAATAGCacatttgaatattaatgaaaatattgaatatctttgtaaggaatgtgactttaaaactcTGTTGGAATGTTCGATAAAAGAACATTTGCGGATTCACAACAAAATGGGTGGTAGATATATTACTAAATGTAAAGTTAAGGTACCACTAACTCCCCCTTTACCACTACAATCGGAAACTCCAGAAATTGATGAATATAGTAGTAATAaatgtgtttataaaacacaataCAAACAACTTTTAAGTACACACGAGAAAATTCACTTCGGTGATAAATACAAGTGTACTGAATGCGAGTATAAAACGATGAGAAaagatagtctaaaggaacatgtaaaaattcacactggtggtgaatataaatgtaatgaatgtgattataaaacaccatggaaacagctTTTAAAAGCACATAAGAAAATTCActcgggtgatgaatataagtgtaacgtaTGCAACTATAAAACATTGCATAAGTTTAATTTGAAAGCACAtactaaaattcatacaggtgatgaatataagtgtaatgaatgtgattataaaacaacgtggaaatatcgtctaatgcaacatgtcaaaattcacacgggtgatgaatatacgtgtaaggaatgtgattataaaactcagtgggaacattgtttaaaggtacatgtgaaaattcacactggtgatgaatataaatgtaatgaatgtgattataaaacaccatggaaacagctTCTAAAAGCACATgagagaattcatacaggtaatgaatataagtgtaatgaatgtaactataaaacattgCATGAAGCTTGTTTACAAGCACAtactaaaattcatacaggtgaggaatataagtgtaatgaatgtgattataaaacaccatggaaacagtcTTTAAagcaacatgtgaaaattcacactggtgatgaatataagtgtaaggaatgtgattataaaacacagtggaAACAGACTTTTAaccaacatatgaaaattcacaccggtgacaaatataattgtaaggaatgtgattataaaactagtTGGAAACGCACTTTAAACtatcatatgaaaattcacactggtgacaaatataagtgtaaggaatgtaattataaaacatggCGGAAACAGACTTTAAACtatcatatgaaaattcacactggtgatgaatataagtgtaatgaatgtgattataaaaccgtGACAAGGGGTGCTCTAAaccaacatatgaaaattcacactgattacgaatataagtgtacgcagtgtgattataaaacacgttGGAAACTGACTTTAAAcctacatatgaaaattcacagtggtgatgaatataagtgtagtgaatgtgattataaaacagtgaggagaGGTGATCTAAaccaacatatgaaaattcacactggtgataaatataagtgtaaggaatgtgattacgAAACACGTTGGAAACTGACTTTGAacaaacatatgaaaattcacaatggtgttgaatataagtga
Protein Sequence: MNVEYNERPIKMEVILHETYSFCGKHENYGNEELKTEPVNFEESFKWEESNFEKYINIHVPVDQYICNECNFMTTEKGFLIEHLKINENVQYFCKECDFKTMLECSIKEHLQAHNRMGDRYITKQCTIKVPLTPPLPLQLETPDIAEYICSKCDYKTRWKQLLQTHTKIHKDDGYKCKECDYKTRWKQLLKAHARIHTGDEYKCNECNYKTLQKACLQAHTKIHTGEEYKCKGCDYKTPWKQLLKAHTKIHTGDEYRCKECDYKTRWKQLLKTHNKIHTGDEYKCKECDYKTRWKQSLNQHVKIHTGDEYKCNECNYKTLQKACLQAHTKIHRGDQYKCKECDYKTSWKQLLKAHERIHTGDEYKCNECDYKTLQKACLQAHIKIHTGDQYKCTECNYKTPWKQLLKTHTKIHTGDVYKCKECDYKTRSKQSLNQHGKIHTGDEYKCNECSYKTPWKQLLKTHTKIHKNDEYKCKECDYKTRWKQSLNQHVKIHTGDEYKCNQCDYKTPWKQLLKAHERLHRGDEYKCNECDYKTLQKSCLQAHTKIHTGDQYKCKECDYKTPWKQLLKAHERIHTGDEYKCTKCDYKTLQKTCLQAHTKIHTGNQYKCKECDYKTPWKQLLKKHTKLHTGDIYKCKECDYTTQWKQSLKQHVKIHIDDEYKCNECDYKTLWKQLLIVNEQIHTGDEYKYNEYDSETLPEINLPAHTTYTVVSAACSISTIIVTPTKESYMMQMDYNECCPIKPEISFCGKHEVVDYENEEFKIEPVNFEESFKWEEDNLEEYMNIHAVSVHQYICNECNFMTTEKDSLIAHLNINENIEYLCKECDFKTLLECSIKEHLRIHNKMGGRYITKCKVKVPLTPPLPLQSETPEIDEYSSNKCVYKTQYKQLLSTHEKIHFGDKYKCTECEYKTMRKDSLKEHVKIHTGGEYKCNECDYKTPWKQLLKAHKKIHSGDEYKCNVCNYKTLHKFNLKAHTKIHTGDEYKCNECDYKTTWKYRLMQHVKIHTGDEYTCKECDYKTQWEHCLKVHVKIHTGDEYKCNECDYKTPWKQLLKAHERIHTGNEYKCNECNYKTLHEACLQAHTKIHTGEEYKCNECDYKTPWKQSLKQHVKIHTGDEYKCKECDYKTQWKQTFNQHMKIHTGDKYNCKECDYKTSWKRTLNYHMKIHTGDKYKCKECNYKTWRKQTLNYHMKIHTGDEYKCNECDYKTVTRGALNQHMKIHTDYEYKCTQCDYKTRWKLTLNLHMKIHSGDEYKCSECDYKTVRRGDLNQHMKIHTGDKYKCKECDYETRWKLTLNKHMKIHNGVEYK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -