Lyun009383.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lamprigera yunnana
Gene Symbol
-
Assembly
GCA_013368075.1
Location
JABVZV010001723.1:199678-214718[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 0.098 1.4 9.7 0.9 1 23 865 887 865 887 0.98
2 28 0.00015 0.0021 18.5 1.2 1 23 892 914 892 914 0.98
3 28 0.19 2.6 8.8 0.3 1 23 919 941 919 941 0.98
4 28 4.2e-05 0.00059 20.3 1.6 1 23 1027 1049 1027 1049 0.99
5 28 0.29 4.1 8.2 0.6 1 23 1054 1076 1054 1076 0.97
6 28 0.00034 0.0048 17.4 2.3 1 23 1081 1103 1081 1103 0.99
7 28 7 1e+02 3.8 1.4 1 23 1108 1130 1108 1130 0.96
8 28 0.085 1.2 9.9 0.6 1 23 1135 1157 1135 1157 0.98
9 28 5.7e-05 0.00081 19.8 1.5 1 23 1162 1184 1162 1184 0.98
10 28 0.78 11 6.8 0.4 1 23 1189 1211 1189 1211 0.96
11 28 0.0053 0.075 13.6 1.7 1 23 1216 1238 1216 1238 0.97
12 28 3.7 52 4.7 1.6 1 23 1243 1265 1243 1265 0.96
13 28 0.14 2 9.1 0.5 1 23 1270 1292 1270 1292 0.98
14 28 4.2e-05 0.00059 20.3 1.6 1 23 1297 1319 1297 1319 0.99
15 28 0.29 4.1 8.2 0.6 1 23 1324 1346 1324 1346 0.97
16 28 0.00034 0.0048 17.4 2.3 1 23 1351 1373 1351 1373 0.99
17 28 7 1e+02 3.8 1.4 1 23 1378 1400 1378 1400 0.96
18 28 0.085 1.2 9.9 0.6 1 23 1405 1427 1405 1427 0.98
19 28 5.7e-05 0.00081 19.8 1.5 1 23 1432 1454 1432 1454 0.98
20 28 0.78 11 6.8 0.4 1 23 1459 1481 1459 1481 0.96
21 28 0.0053 0.075 13.6 1.7 1 23 1486 1508 1486 1508 0.97
22 28 3.7 52 4.7 1.6 1 23 1513 1535 1513 1535 0.96
23 28 0.14 2 9.1 0.5 1 23 1540 1562 1540 1562 0.98
24 28 0.00016 0.0023 18.4 1.3 1 23 1567 1589 1567 1589 0.98
25 28 0.085 1.2 9.9 0.6 1 23 1594 1616 1594 1616 0.98
26 28 0.00035 0.005 17.3 1.8 1 23 1621 1643 1621 1643 0.99
27 28 0.14 2 9.2 0.8 1 23 1648 1670 1648 1670 0.98
28 28 0.46 6.5 7.5 3.5 1 23 1675 1697 1675 1697 0.98

Sequence Information

Coding Sequence
ATGAGTGTTCACGATGAGATGATGGAcatatttttaaacttgaaCCGTTTTTTTGTGGATGCTCTACGAGAAATTCTAACTGAGAATAAGaatggaATCGAAGCCCTACATTGTGTGATCGAAGATATAGAGACTTTTAAGAAAACTGGAACCTTAATTCCATCTTTTGGGACCATTGCTTCAGAATCCCTACTTCCACCTGGAGAACCAGTGCATAGGAAGAACTCCAAGCGGTTGATTGTTTTGGAGGAAAACAATGAATCAGGTGGTTCATTCAAAGAAAATCTAACTTCAGATTCTAACATAGTGGAAGCAGCAACTTTATCCAAATCACTAGAGCAGCATGGCTctattaataacacaaaacaaGTTAtcattaaaacagaaaaaaaaagtgtattagATATTCACATCAATAATGAATCGAATAATGGTAATGTAAAGATAAAAAGAGAAATGCCTCCACCAGCAAAGCTACCTGCAAGAAATTTTCgtcaaaaaaaagagaaaagcactttaaacattaaaaaagaaaacctagatcaaataaaaaaagcatCGATCATTCGTGATTCAGATGTTCAAATTCATAAGGATGCTTTCCCACTTGTAGTTTTAGATGAGTCTGTTGAAGAACCTCAACCCGCAAGATGTACCCGAGCAAGAACCAAGGCGAGGCAGAAAGAGAAAAACACAGAAACAACAGATAGTGGAAGCCATAGCGAAACTCCAATTAATACAGAAATACAAAGAAGTAATAAAATCGATCATGATAATTTGCAAACTGAAAATGTAATTACTGaagaatttgtaaataaaggtagcattacaaataatatagaGATTTCGAATGacgaacaaaaagaaaaacgatcGAGAAATAACTCATCCACCGAAGATGAGTTGCaatctataaaacaaaaattgagaaaaatgaaaagtaaaaaccaTATTGAAAAAGTATCCCAAGAACTGGAAGAAAACTTTATTAATGCCCCCACCAGAACGCCAATTGTGAAGGAACCTCAAAagcttattaatgacacttTAATACTTAACAAACCAACAATATTAAATAGAACGGTTGTTATAGAAAAGGCAATTCCACAAGATTTAAATAGAATCAATATATTAGAGCAACTAGGCACTTCTAAAAAGAAAGATAACAATAGTATAAGTGACGAAGATGTAGTAGCTGACAGTCCCTCCTTGAAGCCACGAAAggtaaaacaaatgtttagcCCGTATGAAAACAGTCCTGTGAAAAAACGTGTCCAAGCATTTGAAAAATTGGGAGCAGCCGATAATTTTGACGTGTCTTCAAAGACCATTAAACCAAGTAAACCTGTGGAAAAAGGATTAACTAAGAATATAACTTCTTCGGCACAAAAAAGTGGTATACCGAAGATATTCATAACTCCTTTAACAAAAACACGatcaaaacattttcaaaaaacctCTACTCCTCAAATGGAATTTCTAGAAAGGGAATTAAgacgaaaacaaaaagaagcagatgcattacaaaaaaaagaagcaatGATACATGCACAAATGGAAGAAAAACGTAAAAAGAGAGAAGAAAGGGAATTGAAAGTGCAACAAGTCAAAATGACTTTAGAAAGAGATAAGCAAATAAATTTGGAACTTGCAGAGAGAGCCAAgaatgacaaaataaaacaaatgctgGCTGAAAAAGAAGCCAAATTGCTGAAACAGAAGGAAGAACTCAATAAAAAACGTATTGCTGCTGTTAAAAAGGCTCCCGAGGCTAAAcaagaaaggaaaaaagaaatcccTATATATTTAAAACATGAAGCCCCTCTACTTCCTACTGAAGATTGTTATGATTCTGACAACTCTTTTTCTGGACAACAAGTTAAACAAAAGTGGGAAAAAGCGTCAGCCCCCATTCTGAGATGCACGAAATACCTTCTATCccttgaaaagaaatttttcttaactgGACCCAAAAGTCctaatttaatgaatattttccCTGCAATTGAGCCTGCTAAATTGAAAAGAACTTCAAGCGCCATTTGGAATAAAACCGAAATGTCCATTTTAGCGAACTTCACAAACGATGAGGAAGAAGATGAAGACGATGGTGATGAAATAGAtttatcttATACAGTGGATATGGACTCGATAgactttattgaaagttgtgctataaaatcagaagcgattttaacagagacattttgtttttgtgggaAGTACGAAGtGTGTGAGAGTAACCAGGAGCTGAAACTGGAGCCAGTAAATTACGAAGAATCATTTAAacctaaagaagaaaatgatctgGCAGAACCCACAGATATACATGTTGCTCCGACGCAACGAGATTTTTGTagtgattataattttataacaattggaGAAAATTCTCTAATAGATCCTTTGAAAGctaataaaagcattaaaaactCTTGTAAAGATGGTAACTTTACAACTCAGTTCGAATGTTCTATAAAAGAACATACGAGGATTCACAATGATGGATGTAATATtgaagaaagtaattttaagaCACCAGAGATTTTCTCTCTATCACCACAGTTGAAAACTCCAAGAAGTGTGAATGAAtatgtttgtaatgaatgtaattacaccacattgaacaaaaattatctaacaatgcatgtgaagattcatAAAAGTGCTGTATATAGTTGcgagaaatgtgattataaaacagtacggaaaagtaatttaatgcaacatgtcaaaattcattcgcgtaatgaatataagtgtaaagaatgtgctTATAAAACTATATGGAAAAGTGCTCTAAttcgacatgtcaaaattcatacacgtgaagaatataagtgtatagaatgtgattatacAACAGTATGGAAAATTCGTCTACAggaacatcttaaaattcatacaagtgatgaatacaagtgtaaacacggtgattttaaaactgaacagaaaggtaatctaaagcaacatttcaaaattcatactggtgataagtATAAGTGtatggaatgtgattataaaacagtatggaaaaatcgtctaaaggaatatgtcaaaattcattcaggtgatgagtataagtgtaaagaatgtgattataaaacagtacggaaaagtaatttaatgcaacatgtcaaaattcatacaggtgtcgcatataagtgtaaagaatgtgattatacaaCAGTATGGAAAATTCGTCTACAggaacatcttaaaattcatacaggtgatgagtacaagtgtaaagaatgtgattttaaaacagtacagaaaggcaatctaaagcaacatgtcaaaaaacATACTGGTGATAAGTATAAGTgtatagaatgtgattataaaacagcatggaaaaatcatctaaaggaacatgtcaaaattcatacgggtgatgagtataagtgtaaagaatgtgattataaaacagtatggaaaattAGTCTACAGGAACatctaaaaattcatacaggtgatgaatacaggtgtaaagagtgtgattataaaacagtacggaaaagtaatttaatgcaacatgtcaaaatccatacaggtgtcacatataagtgtgaagaatgtgattataaaacagtatggaaaattCGTCTACAggaacatcttaaaattcatacaggtgatgaatacaagtgtaaagaatgtgattttaaaactttacaGAAAGgcaatctaaagcaacatatcaaaattcatagtggtgataagtataagtgtatagaatgtgattataaaacagcatggaaatatcatctaaaggaacatgtcaaaattcataccggtgatgagtataaatgtaaagaatgtgattataaatcagtGTGGAAAATTAGCCTACAggaacatcttaaaattcatacaggtaatgaatacaagtgtaaagaatgtgattataaaacagtacggaaaagtaatttaatgcaacatgtcaaaattcatacaggtgtcgcatataagtgtaaagaatgtgattatacaaCAGTATGGAAAATTCGTCTACAggaacatcttaaaattcatacaggtgatgagtacaagtgtaaagaatgtgattttaaaacagtacagaaaggcaatctaaagcaacatgtcaaaaaacATACTGGTGATAAGTATAAGTgtatagaatgtgattataaaacagcatggaaaaatcatctaaaggaacatgtcaaaattcatacgggtgatgagtataagtgtaaagaatgtgattataaaacagtatggaaaattAGTCTACAGGAACatctaaaaattcatacaggtgatgaatacaggtgtaaagagtgtgattataaaacagtacggaaaagtaatttaatgcaacatgtcaaaatccatacaggtgtcacatataagtgtgaagaatgtgattataaaacagtatggaaaattCGTCTACAggaacatcttaaaattcatacaggtgatgaatacaagtgtaaagaatgtgattttaaaactttacaGAAAGgcaatctaaagcaacatatcaaaattcatagtggtgataagtataagtgtatagaatgtgattataaaacagcatggaaatatcatctaaaggaacatgtcaaaattcataccggtgatgagtataaatgtaaagaatgtgattataaatcagtGTGGAAAATTAGCCTACAggaacatcttaaaattcatacaggtaatgaatacaagtgtaaagaatgtgattttaaaacggtacggaaaagtaatttagtgcaacatgtcaaaattcatacaggtgacacatataagtgtaaagaatgtgattataaaacagtatggaaaattAGTCTACAggaacatcttaaaattcatacaggtgatcaatacaagtgtaaagaatgcaattataaaacggTACGGAAAAGTAGTTTACtccaacatgtcaaaattcatacaggcgatgaatataagtgtaaagaatgtaattataaaacagtatggaaaattAGTCTACAggaacatcttaaaattcatactggtgatgaatacaagtgtacagaatgtgattataaaacagtatggaaaaattgtctaaagaaacatgtaaaaattcatactggcgatgactataaatctaaaaaagtgattttaaaactgtatggaaaagtgatctaa
Protein Sequence
MSVHDEMMDIFLNLNRFFVDALREILTENKNGIEALHCVIEDIETFKKTGTLIPSFGTIASESLLPPGEPVHRKNSKRLIVLEENNESGGSFKENLTSDSNIVEAATLSKSLEQHGSINNTKQVIIKTEKKSVLDIHINNESNNGNVKIKREMPPPAKLPARNFRQKKEKSTLNIKKENLDQIKKASIIRDSDVQIHKDAFPLVVLDESVEEPQPARCTRARTKARQKEKNTETTDSGSHSETPINTEIQRSNKIDHDNLQTENVITEEFVNKGSITNNIEISNDEQKEKRSRNNSSTEDELQSIKQKLRKMKSKNHIEKVSQELEENFINAPTRTPIVKEPQKLINDTLILNKPTILNRTVVIEKAIPQDLNRINILEQLGTSKKKDNNSISDEDVVADSPSLKPRKVKQMFSPYENSPVKKRVQAFEKLGAADNFDVSSKTIKPSKPVEKGLTKNITSSAQKSGIPKIFITPLTKTRSKHFQKTSTPQMEFLERELRRKQKEADALQKKEAMIHAQMEEKRKKREERELKVQQVKMTLERDKQINLELAERAKNDKIKQMLAEKEAKLLKQKEELNKKRIAAVKKAPEAKQERKKEIPIYLKHEAPLLPTEDCYDSDNSFSGQQVKQKWEKASAPILRCTKYLLSLEKKFFLTGPKSPNLMNIFPAIEPAKLKRTSSAIWNKTEMSILANFTNDEEEDEDDGDEIDLSYTVDMDSIDFIESCAIKSEAILTETFCFCGKYEVCESNQELKLEPVNYEESFKPKEENDLAEPTDIHVAPTQRDFCSDYNFITIGENSLIDPLKANKSIKNSCKDGNFTTQFECSIKEHTRIHNDGCNIEESNFKTPEIFSLSPQLKTPRSVNEYVCNECNYTTLNKNYLTMHVKIHKSAVYSCEKCDYKTVRKSNLMQHVKIHSRNEYKCKECAYKTIWKSALIRHVKIHTREEYKCIECDYTTVWKIRLQEHLKIHTSDEYKCKHGDFKTEQKGNLKQHFKIHTGDKYKCMECDYKTVWKNRLKEYVKIHSGDEYKCKECDYKTVRKSNLMQHVKIHTGVAYKCKECDYTTVWKIRLQEHLKIHTGDEYKCKECDFKTVQKGNLKQHVKKHTGDKYKCIECDYKTAWKNHLKEHVKIHTGDEYKCKECDYKTVWKISLQEHLKIHTGDEYRCKECDYKTVRKSNLMQHVKIHTGVTYKCEECDYKTVWKIRLQEHLKIHTGDEYKCKECDFKTLQKGNLKQHIKIHSGDKYKCIECDYKTAWKYHLKEHVKIHTGDEYKCKECDYKSVWKISLQEHLKIHTGNEYKCKECDYKTVRKSNLMQHVKIHTGVAYKCKECDYTTVWKIRLQEHLKIHTGDEYKCKECDFKTVQKGNLKQHVKKHTGDKYKCIECDYKTAWKNHLKEHVKIHTGDEYKCKECDYKTVWKISLQEHLKIHTGDEYRCKECDYKTVRKSNLMQHVKIHTGVTYKCEECDYKTVWKIRLQEHLKIHTGDEYKCKECDFKTLQKGNLKQHIKIHSGDKYKCIECDYKTAWKYHLKEHVKIHTGDEYKCKECDYKSVWKISLQEHLKIHTGNEYKCKECDFKTVRKSNLVQHVKIHTGDTYKCKECDYKTVWKISLQEHLKIHTGDQYKCKECNYKTVRKSSLLQHVKIHTGDEYKCKECNYKTVWKISLQEHLKIHTGDEYKCTECDYKTVWKNCLKKHVKIHTGDDYKSKKVILKLYGKVI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-