Basic Information

Insect: Lamprigera yunnana
Gene Symbol: -
Assembly: GCA_013368075.1
Location: JABVZV010000835.1:869689-894348[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 33 0.23 3.2 8.5 0.6 1 21 87 107 87 108 0.95

2 33 0.0098 0.14 12.8 3.5 1 23 182 204 182 204 0.98

3 33 0.12 1.7 9.4 2.5 1 23 209 231 209 231 0.98

4 33 0.026 0.36 11.5 0.5 1 23 236 258 236 258 0.99

5 33 2 28 5.6 0.5 1 23 263 285 263 285 0.90

6 33 4.7 67 4.4 2.1 1 23 290 312 290 312 0.91

7 33 0.0012 0.017 15.7 2.9 1 23 317 339 317 339 0.99

8 33 0.11 1.6 9.5 2.1 1 23 344 366 344 366 0.98

9 33 0.082 1.2 9.9 0.6 1 23 371 393 371 393 0.98

10 33 0.0037 0.052 14.1 1.0 1 23 398 420 398 420 0.98

11 33 0.00031 0.0044 17.5 2.2 1 23 452 474 452 474 0.99

12 33 0.00031 0.0044 17.5 2.2 1 23 506 528 506 528 0.99

13 33 0.00016 0.0023 18.4 1.8 1 23 560 582 560 582 0.99

14 33 0.0031 0.043 14.4 2.2 1 23 587 609 587 609 0.98

15 33 0.00074 0.01 16.3 3.3 1 23 614 636 614 636 0.98

16 33 0.18 2.6 8.8 1.1 1 23 790 812 790 812 0.98

17 33 0.14 1.9 9.2 1.2 1 23 844 866 844 866 0.98

18 33 1.8 25 5.7 2.3 1 23 871 893 871 893 0.98

19 33 0.2 2.8 8.7 0.9 1 23 898 920 898 920 0.97

20 33 5.8e-05 0.00083 19.8 1.1 1 23 925 947 925 947 0.99

21 33 0.46 6.5 7.5 0.9 1 23 952 974 952 974 0.97

22 33 0.063 0.89 10.3 1.0 1 23 979 1001 979 1001 0.98

23 33 2.4 34 5.3 1.1 1 19 1006 1024 1006 1028 0.86

24 33 0.00015 0.0021 18.5 3.8 1 23 1033 1055 1033 1055 0.99

25 33 0.55 7.8 7.3 1.0 1 23 1060 1082 1060 1082 0.97

26 33 0.0011 0.016 15.8 0.9 1 23 1087 1109 1087 1109 0.98

27 33 0.011 0.15 12.7 2.2 1 23 1114 1136 1114 1136 0.98

28 33 7.5e-05 0.0011 19.5 2.6 1 23 1141 1163 1141 1163 0.99

29 33 0.28 4 8.2 0.5 1 23 1168 1190 1168 1190 0.97

30 33 4.6e-05 0.00066 20.1 2.2 1 23 1195 1217 1195 1217 0.99

31 33 9.3e-05 0.0013 19.2 1.3 1 23 1222 1244 1222 1244 0.99

32 33 0.061 0.86 10.3 1.6 1 23 1249 1271 1249 1271 0.98

33 33 0.0088 0.13 12.9 0.5 1 23 1276 1298 1276 1298 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	33	0.23	3.2	8.5	0.6	1	21	87	107	87	108	0.95
2	33	0.0098	0.14	12.8	3.5	1	23	182	204	182	204	0.98
3	33	0.12	1.7	9.4	2.5	1	23	209	231	209	231	0.98
4	33	0.026	0.36	11.5	0.5	1	23	236	258	236	258	0.99
5	33	2	28	5.6	0.5	1	23	263	285	263	285	0.90
6	33	4.7	67	4.4	2.1	1	23	290	312	290	312	0.91
7	33	0.0012	0.017	15.7	2.9	1	23	317	339	317	339	0.99
8	33	0.11	1.6	9.5	2.1	1	23	344	366	344	366	0.98
9	33	0.082	1.2	9.9	0.6	1	23	371	393	371	393	0.98
10	33	0.0037	0.052	14.1	1.0	1	23	398	420	398	420	0.98
11	33	0.00031	0.0044	17.5	2.2	1	23	452	474	452	474	0.99
12	33	0.00031	0.0044	17.5	2.2	1	23	506	528	506	528	0.99
13	33	0.00016	0.0023	18.4	1.8	1	23	560	582	560	582	0.99
14	33	0.0031	0.043	14.4	2.2	1	23	587	609	587	609	0.98
15	33	0.00074	0.01	16.3	3.3	1	23	614	636	614	636	0.98
16	33	0.18	2.6	8.8	1.1	1	23	790	812	790	812	0.98
17	33	0.14	1.9	9.2	1.2	1	23	844	866	844	866	0.98
18	33	1.8	25	5.7	2.3	1	23	871	893	871	893	0.98
19	33	0.2	2.8	8.7	0.9	1	23	898	920	898	920	0.97
20	33	5.8e-05	0.00083	19.8	1.1	1	23	925	947	925	947	0.99
21	33	0.46	6.5	7.5	0.9	1	23	952	974	952	974	0.97
22	33	0.063	0.89	10.3	1.0	1	23	979	1001	979	1001	0.98
23	33	2.4	34	5.3	1.1	1	19	1006	1024	1006	1028	0.86
24	33	0.00015	0.0021	18.5	3.8	1	23	1033	1055	1033	1055	0.99
25	33	0.55	7.8	7.3	1.0	1	23	1060	1082	1060	1082	0.97
26	33	0.0011	0.016	15.8	0.9	1	23	1087	1109	1087	1109	0.98
27	33	0.011	0.15	12.7	2.2	1	23	1114	1136	1114	1136	0.98
28	33	7.5e-05	0.0011	19.5	2.6	1	23	1141	1163	1141	1163	0.99
29	33	0.28	4	8.2	0.5	1	23	1168	1190	1168	1190	0.97
30	33	4.6e-05	0.00066	20.1	2.2	1	23	1195	1217	1195	1217	0.99
31	33	9.3e-05	0.0013	19.2	1.3	1	23	1222	1244	1222	1244	0.99
32	33	0.061	0.86	10.3	1.6	1	23	1249	1271	1249	1271	0.98
33	33	0.0088	0.13	12.9	0.5	1	23	1276	1298	1276	1298	0.98

Sequence Information

Coding Sequence: ATGGATGACGATTATAATGAAAGATATCCAATAAAAACCGAAGtgattgtaaatgaaacattttcattttatggaaaatatgaaggtaaaaaGTATTGGaatattttgatagtattttcatCTAGTTGGTATTACCTTGTAGATTACTGGAGTCAAGAGTTGAAAACAGAGGTGGTTGATTtcgaagaatcttttaaatataaagaacaaTATAATCTTGGACACCTCATCGATATACATGACGTATTCAAACCTCACTATAGTTGCaacgaatgtaattttattacaacagaGAAAGACTGTCTAATAgagcatttgaaaattactaaaaatgttcaatatttttgtaaggattGTAACTTTAACACCCGGTTTTTATGTTCGATTAAAGAACATTTCAGGATACATAACAGGGTTGGTTGTAcacaaattactaaaaaaaatatctttaagaCTCCACAAATTTTCTCCCTAACACCACAGTTGAAAAGACCTTTGAAATTGAGAGTAGAGGAACATGTTAATATttatactggtgatgaatataagtgtaaggaatgtgattataaaacactctCCAAAAAGTATCTAAagcaacatatgaaaattcatactggcgataaatatatgtgtaagaaatgtgattataaaacgccgtggaaacatagtctaaaggaacatataaaaattcatactggtgatgaatacaagtgtaaggaatgtgattataaaactgtgtggaaaatGAGTCTAATGGAACATAtaagaattcatactggtgatgaatacaagtgtaacgaatgtgattataaaacagtttggaaacgGAGACTAATTGAACATGGAAAAATTCATGCTGGggttgaatataagtgtaaagaatgtgattataaaacgcttTGGAAAAAGAGTCTAAAGGAGCAtacaaaaattcatactggtgatgaatataagtgtaaggagtgtaactataaaacagtgaggaaaaatagtctaaaggatcatacaaaaattcataccggtgatgaatataagtgtaaggaatgtgattataaaacactgaaCAAACGAAGTATAAaagatcatatgaaaattcatactggtgaagaatataagtgtaaggaatgtgattataaaacggtgtggaaaaGGAGTTTAATGGAACATATAAgtattcatactggtgatgaatacaagtgtaacgaatgtgattataaaacagttaggAAACGGAGACTAATcgatcatgtcaaaattcatacgggggttcaatataagtgtaaagaatgtgtttATAAGACGCTGTGGAAAAGGAGTCTAAtggaacatataaaaattcatactggtgatgaatataagtgtaaggagtgtaactataaaacagtgaaaaagaataatctaaaggaacatataaaaattcataacggTGAAGAAtgtaaatgtaaggaatgtgattataaaacactgtggaaaaGGAGTTTAAtggaacatataaaaattcatactggtgatgaatataagtgcaaggagtgtaactataaaacagtgaaaaagaataatctaaaggaacatataaaaattcataacggTGAAGAAtgtaaatgtaaggaatgtgattataaaacactgtggaaaaGGAGTTTAAtggaacatataaaaattcatactggtgatgaatataagtgcaaggagtgtgactataaaacagtgaaaaaaaataatctaaaggaacatataaaaattcatataggtgaggattataaatgtaaggaatgtgattataaaacactctcgaaacaaaatctaaaggaacatatgaaaattcataatggtgaaaaatacaagtgtaaggagtgtaactttaaaacagtgcgaaaatataatctaaagcaacatgaaaaaattcatactggtgatgaaaaTAAtTTATCTTATGCAATGGATATTGACACGGTAGACACTATTGAAAGTgatgctataaaatcagaagtgattttaacagagacATTTTCTCTTTGTGTGAAATGCGAAGattGTGAGAGTAAGGAACTGAAACCGGAGCCAGTGGATTATGAAGATTTGCTTAcacttaaagaagaaaatgatctaGTAGAACCCATAGATACACATATACATGCTGTTCCGTTGCAACGGGATTTTTGTAATGActctaattttataacaattggaGAAAATTCTCTAATAGAACTTAAATCTCCTAAAAGCGTTAAATACTTTAATAAGGAATGTATCTTTACAACCCCATTAGAATATTCAATAAACGATCATATGATGAAGTACAATGATAATATcgaagaatataattttaagacGCCACAGTTGGATACTCCAATAAGTAGGAATAAAtatgtttgtaatgaatgtaattacatCACATTGAACAAAAACtttctaaagaaacatgtgaaGATTCACAAAAGAACTGCATATAGTTGcgagaaatgtgattataatacatGGTGGAAAAGTCACTTCACAGCACATACAAAAATCCAttcaggtaatgaatataagtgtaaagagtgcgattataaaacagtatggaaaaattctctaaaggaacatgttaaacTTCATataggtgaagaatataagtgtttaaaatgtgattttaaaactgtatggaaaagtgCTCTATATcaccatgtcaaaattcataacggtgataaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggaacatggtaaaattcatactggcaatgagtataagtgtaaagaatgtgattttaaaactgttcaGAAAGGTAATCTAaatcaacatatcaaaattcatactggtgagaagtataattgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggaacatgtcaaacttcatacaggtgagaagtataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggaacatgtaaaaattcatactggtgagaagtataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggaacatgacaaaattcatactagtgatcagtataagtgtaaagaatgtgattttaaaactgtacagaaaagtcatctaaatcgacatgtcaaaattcatactggtgagaagtataagtgtaaagaatgtgattttaaaacggtatggaaaaattctctaaaggaCCATGGCAAAATTCATACcagtgacaaatataagtgtgaagaatgtgattataatacagtacgaaaaaattctctaaaggaacatgtcaaacttcatacaggtgataaatataagtgtctagaatgtgattttaaaagtGCACATAAAAGTTATCTAAAtctacatgtcaaaattcataccggtgacgaatataagtgcaaagaatgtgattttaaaactgtacacAAAGGTAATCTAAATCAACATATccgaattcatactggtgagaagtataagtgtaaagaatgcgattatgaaacagtatggaaaaattctctaaaggaacacggcaaaattcatactggtgatgaatataagtgtaaagaatgtgatttcaaaactgtacagaaaagttatctaaatcgacatatcaaaattcatacaggtgacgaatataagtgtaaagaatgcgattacAAAACTGTACtgaaaagtaatctaaatcaacatatcaaaattcatactggtgacaaatataagtgtacagaatgtgattataaaacagtatggaaaaattctctcaagaaacatgtcaaacttcatacaggtgataaatataagtgtctagaatgtgattttaaaactatagggaaaagtgatctaaagcaacatgccaaaattcatacaatGTAG
Protein Sequence: MDDDYNERYPIKTEVIVNETFSFYGKYEGKKYWNILIVFSSSWYYLVDYWSQELKTEVVDFEESFKYKEQYNLGHLIDIHDVFKPHYSCNECNFITTEKDCLIEHLKITKNVQYFCKDCNFNTRFLCSIKEHFRIHNRVGCTQITKKNIFKTPQIFSLTPQLKRPLKLRVEEHVNIYTGDEYKCKECDYKTLSKKYLKQHMKIHTGDKYMCKKCDYKTPWKHSLKEHIKIHTGDEYKCKECDYKTVWKMSLMEHIRIHTGDEYKCNECDYKTVWKRRLIEHGKIHAGVEYKCKECDYKTLWKKSLKEHTKIHTGDEYKCKECNYKTVRKNSLKDHTKIHTGDEYKCKECDYKTLNKRSIKDHMKIHTGEEYKCKECDYKTVWKRSLMEHISIHTGDEYKCNECDYKTVRKRRLIDHVKIHTGVQYKCKECVYKTLWKRSLMEHIKIHTGDEYKCKECNYKTVKKNNLKEHIKIHNGEECKCKECDYKTLWKRSLMEHIKIHTGDEYKCKECNYKTVKKNNLKEHIKIHNGEECKCKECDYKTLWKRSLMEHIKIHTGDEYKCKECDYKTVKKNNLKEHIKIHIGEDYKCKECDYKTLSKQNLKEHMKIHNGEKYKCKECNFKTVRKYNLKQHEKIHTGDENNLSYAMDIDTVDTIESDAIKSEVILTETFSLCVKCEDCESKELKPEPVDYEDLLTLKEENDLVEPIDTHIHAVPLQRDFCNDSNFITIGENSLIELKSPKSVKYFNKECIFTTPLEYSINDHMMKYNDNIEEYNFKTPQLDTPISRNKYVCNECNYITLNKNFLKKHVKIHKRTAYSCEKCDYNTWWKSHFTAHTKIHSGNEYKCKECDYKTVWKNSLKEHVKLHIGEEYKCLKCDFKTVWKSALYHHVKIHNGDKYKCKECDYKTVWKNSLKEHGKIHTGNEYKCKECDFKTVQKGNLNQHIKIHTGEKYNCKECDYKTVWKNSLKEHVKLHTGEKYKCKECDYKTVWKNSLKEHVKIHTGEKYKCKECDYKTVWKNSLKEHDKIHTSDQYKCKECDFKTVQKSHLNRHVKIHTGEKYKCKECDFKTVWKNSLKDHGKIHTSDKYKCEECDYNTVRKNSLKEHVKLHTGDKYKCLECDFKSAHKSYLNLHVKIHTGDEYKCKECDFKTVHKGNLNQHIRIHTGEKYKCKECDYETVWKNSLKEHGKIHTGDEYKCKECDFKTVQKSYLNRHIKIHTGDEYKCKECDYKTVLKSNLNQHIKIHTGDKYKCTECDYKTVWKNSLKKHVKLHTGDKYKCLECDFKTIGKSDLKQHAKIHTM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -