Basic Information

Insect: Lamprigera yunnana
Gene Symbol: -
Assembly: GCA_013368075.1
Location: JABVZV010000047.1:1814440-1817706[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.0004 0.0056 17.2 1.2 2 23 186 207 185 207 0.97

2 25 0.00012 0.0017 18.8 2.9 2 23 213 234 212 234 0.97

3 25 0.002 0.028 15.0 1.8 2 23 267 288 266 288 0.97

4 25 0.00016 0.0023 18.4 2.0 1 23 293 315 293 315 0.99

5 25 0.0096 0.14 12.8 0.7 2 23 326 347 325 347 0.97

6 25 0.0004 0.0056 17.2 1.2 2 23 353 374 352 374 0.97

7 25 0.00012 0.0017 18.8 2.9 2 23 380 401 379 401 0.97

8 25 0.002 0.028 15.0 1.8 2 23 434 455 433 455 0.97

9 25 3.3e-05 0.00047 20.6 1.2 2 23 461 482 460 482 0.97

10 25 0.00086 0.012 16.1 2.5 1 23 487 509 487 509 0.99

11 25 5.4e-05 0.00076 19.9 0.7 2 23 515 536 514 536 0.97

12 25 0.0051 0.073 13.7 1.5 2 23 542 563 541 563 0.97

13 25 1.1 15 6.4 1.7 2 23 569 590 568 590 0.96

14 25 0.0033 0.046 14.3 4.2 2 23 596 617 595 617 0.97

15 25 0.00032 0.0046 17.5 1.5 2 23 623 644 622 644 0.97

16 25 0.00012 0.0016 18.9 3.3 1 23 649 671 649 671 0.99

17 25 0.0049 0.069 13.7 0.7 2 23 677 698 676 698 0.97

18 25 0.00039 0.0056 17.2 4.5 1 23 703 725 703 725 0.98

19 25 0.011 0.16 12.6 0.8 2 23 731 752 730 752 0.97

20 25 0.0056 0.08 13.6 4.4 1 23 757 779 757 779 0.98

21 25 0.0046 0.066 13.8 1.9 2 23 785 806 784 806 0.97

22 25 0.0062 0.088 13.4 4.0 2 23 812 833 811 833 0.97

23 25 0.049 0.7 10.6 0.7 2 23 839 860 838 860 0.96

24 25 0.00011 0.0016 18.9 0.8 2 23 866 887 865 887 0.97

25 25 0.11 1.5 9.5 3.5 2 23 893 914 892 914 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.0004	0.0056	17.2	1.2	2	23	186	207	185	207	0.97
2	25	0.00012	0.0017	18.8	2.9	2	23	213	234	212	234	0.97
3	25	0.002	0.028	15.0	1.8	2	23	267	288	266	288	0.97
4	25	0.00016	0.0023	18.4	2.0	1	23	293	315	293	315	0.99
5	25	0.0096	0.14	12.8	0.7	2	23	326	347	325	347	0.97
6	25	0.0004	0.0056	17.2	1.2	2	23	353	374	352	374	0.97
7	25	0.00012	0.0017	18.8	2.9	2	23	380	401	379	401	0.97
8	25	0.002	0.028	15.0	1.8	2	23	434	455	433	455	0.97
9	25	3.3e-05	0.00047	20.6	1.2	2	23	461	482	460	482	0.97
10	25	0.00086	0.012	16.1	2.5	1	23	487	509	487	509	0.99
11	25	5.4e-05	0.00076	19.9	0.7	2	23	515	536	514	536	0.97
12	25	0.0051	0.073	13.7	1.5	2	23	542	563	541	563	0.97
13	25	1.1	15	6.4	1.7	2	23	569	590	568	590	0.96
14	25	0.0033	0.046	14.3	4.2	2	23	596	617	595	617	0.97
15	25	0.00032	0.0046	17.5	1.5	2	23	623	644	622	644	0.97
16	25	0.00012	0.0016	18.9	3.3	1	23	649	671	649	671	0.99
17	25	0.0049	0.069	13.7	0.7	2	23	677	698	676	698	0.97
18	25	0.00039	0.0056	17.2	4.5	1	23	703	725	703	725	0.98
19	25	0.011	0.16	12.6	0.8	2	23	731	752	730	752	0.97
20	25	0.0056	0.08	13.6	4.4	1	23	757	779	757	779	0.98
21	25	0.0046	0.066	13.8	1.9	2	23	785	806	784	806	0.97
22	25	0.0062	0.088	13.4	4.0	2	23	812	833	811	833	0.97
23	25	0.049	0.7	10.6	0.7	2	23	839	860	838	860	0.96
24	25	0.00011	0.0016	18.9	0.8	2	23	866	887	865	887	0.97
25	25	0.11	1.5	9.5	3.5	2	23	893	914	892	914	0.97

Sequence Information

Coding Sequence: ATGGATGTTGATTGCAATGAAAGTTGTCTAATAAAATCTGAGGTGACtctaacagaaacattttcttttaatggaGAATTCAGAGattatgAGAATAATGAATTGAAATCAGAGCCAGTAGAAATCGAagactcttttaaatacaaagaaGAAGATAACCTTGCAGAGCATATGAATATAACAACAGAAAAGGGTTGTCTAATAAAACATATGAAAAGTACTAAAAACTTTGAACatttgtgtaaagaatgtaactatCAAACTCTATTGCAATGTTCCATGaatgaacatttaagaattcatCATGGAGTTGATAGTAAATGGAATATTTTGACGCCTCAAAATATCTCAGTAACACGACACTTAAAAACTGCCGAAAGTGATGATTACTATATTTGTAATCAATGTAGTTTTAGAACACAATGGaaacataaactaaaaatacatataaataatcatataaGTGATCAgcataagtgtaaggaatgtgattttaaaacggtTTGGAAATGTAGTCATAacacacatatgaaaattcacacaggtgataaactgaagtgtaaagaatgtgactacgaAACTACTAGGGAATATGATTTTAATACacacatgaaaattcatacaggggatgaattgcagtgtaaagaatgcgactACAAAACACCTAGAAAACATAATCTTAAgttgcatatgaaaattcacacaggtgaaaAATTAGAGTGTAAAGAAGGTGACTATGAAACTGCTAGTAAACAATATCTTATCACACATACGAAAATTCACAATGGTGAtaaattgaagtgtaaagaatgtgactacgaAACTGCTAGGGAACATGATTTTAacacacatatgaaaattcatacaggtgatgaatttaagtgtaaggaatgtgactacgaAACTACTAGGGAATATGATTTTAAtacacatatgaaaattcatacaggtgatgaattacAGTgtgaaaAATtagagtgtaaagaatgtgactatgaAACTGCTAGTAAACAATATCTTTTCACACATACGAAAATTCACAATGgtgaaaaattaaagtgtaaagaatgtgactacgaAACTACTAGGGAATATGATTTTAAtacacatatgaaaattcatacaggtgatgaattacagtgtaaagaatgcgactACAAAACACCTAGAAAACATAATCTTAAgttgcatatgaaaattcacacaggtgaaaAATTAGAGTGTAAAGAAGGTGACTATGAAACTGCTAGTAAACAATATCTTATCACACATACGAAAATTCACAATGGTGAtaaattgaagtgtaaagaatgtgactacgaAACTGCTAGGGAACATGATTTTAacacacatatgaaaattcatacaggtgatgaattacagtgtaaagaatgcgactACAAAACACCtaggaaatatttattaaaacaacatatgagaattcatacaggtgatgaatttaagtgtaaggaatgtgactacaaaacaccgaGGAAACATGATATTAACGTGCACATGAAAATTCACACGGGTGAAaaattgaagtgtaaagaatgtgactacgaAACTGTTCGGAAATTTAATCTTAAtgcacatatgaaaattcacacaggtgatgattTGAAGTGTAAAAAGTGTGACTACACAACTGTGTGGAAATCTAATCTTTacacacatatgaaaattcacacaggtgataaattgaagtgtaaagaatgtaactacGAAACTCCTTGGAAACACTATCTTATCACACATACAAAAATTCACAGAGGTGAAAAATTGAAGTGTCAAGAATGTGAATACAAAACAACTAGGAAACATGATTTTAacacacatatgaaaattcatacaggtgatgaattgaaatgtaaagaTTGCGACTTCAAAACTCCtaggaaatttttattaaaagaacatatgagaattcatacaggtgatgaattcaagtgtacagaatgtgactacaaaacacctaGAAAACATGATCTTAAgttgcatatgaaaattcacacaggtgaaaaattaaagtgtaaagaatgtgactacgaAACTGCTAGTAAACAATATCTTATCACACATACAAAAATTCACAACGGTGataaatttaagtgtaaagaatgtgactacaaaactacTAGGAAACATGATTTTAACGCACActtgaaaattcatacaagtggTGAATtgaagtgtaatgaatgtgactacaaaactcctaagaaatatatattaaaagaacatatgagaattcatacagatgatgaattcaagtgtaaggaatgtgactacaaaacacctaGGAAACATGATTTTAACTTGCATACGAAAATTCACACGGgtgaaaaattaaagtgtaaagaatgtgactataaaactcGTCTGAAATTTAATCTTGAtacacatatgaaaattcacacaggtgataaattgaagtgtaaagaatgtgactacaaaactcataggaaacaaaatctttacttgcatatgaaaattcacacaggtgaaaaattaaattgtaaagaatgtgactataaaactgtgtggaaatCTAGTCTTTacacacatatgaaaattcacacaggtgataaattgaagtgtaatcaatgtgactacaaaactcctaGGAAACAAGATCTTAACatacatatgagaattcatacaggtgatgaattgaaatgtacaaaatgtgacTATAAGACTGTGTGGAAGTGTAATCTTAAtaatcatatgaaaattcatatgatgtaa
Protein Sequence: MDVDCNESCLIKSEVTLTETFSFNGEFRDYENNELKSEPVEIEDSFKYKEEDNLAEHMNITTEKGCLIKHMKSTKNFEHLCKECNYQTLLQCSMNEHLRIHHGVDSKWNILTPQNISVTRHLKTAESDDYYICNQCSFRTQWKHKLKIHINNHISDQHKCKECDFKTVWKCSHNTHMKIHTGDKLKCKECDYETTREYDFNTHMKIHTGDELQCKECDYKTPRKHNLKLHMKIHTGEKLECKEGDYETASKQYLITHTKIHNGDKLKCKECDYETAREHDFNTHMKIHTGDEFKCKECDYETTREYDFNTHMKIHTGDELQCEKLECKECDYETASKQYLFTHTKIHNGEKLKCKECDYETTREYDFNTHMKIHTGDELQCKECDYKTPRKHNLKLHMKIHTGEKLECKEGDYETASKQYLITHTKIHNGDKLKCKECDYETAREHDFNTHMKIHTGDELQCKECDYKTPRKYLLKQHMRIHTGDEFKCKECDYKTPRKHDINVHMKIHTGEKLKCKECDYETVRKFNLNAHMKIHTGDDLKCKKCDYTTVWKSNLYTHMKIHTGDKLKCKECNYETPWKHYLITHTKIHRGEKLKCQECEYKTTRKHDFNTHMKIHTGDELKCKDCDFKTPRKFLLKEHMRIHTGDEFKCTECDYKTPRKHDLKLHMKIHTGEKLKCKECDYETASKQYLITHTKIHNGDKFKCKECDYKTTRKHDFNAHLKIHTSGELKCNECDYKTPKKYILKEHMRIHTDDEFKCKECDYKTPRKHDFNLHTKIHTGEKLKCKECDYKTRLKFNLDTHMKIHTGDKLKCKECDYKTHRKQNLYLHMKIHTGEKLNCKECDYKTVWKSSLYTHMKIHTGDKLKCNQCDYKTPRKQDLNIHMRIHTGDELKCTKCDYKTVWKCNLNNHMKIHMM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -