Basic Information

Insect: Lamprigera yunnana
Gene Symbol: -
Assembly: GCA_013368075.1
Location: JABVZV010001723.1:268485-278936[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 35 0.0072 0.1 13.2 1.6 1 23 150 172 150 172 0.98

2 35 0.0092 0.13 12.9 1.4 1 23 177 199 177 199 0.98

3 35 0.00059 0.0084 16.6 1.6 1 23 204 226 204 226 0.99

4 35 0.25 3.5 8.4 3.1 1 23 231 253 231 253 0.98

5 35 0.064 0.91 10.2 2.3 1 23 258 280 258 280 0.98

6 35 3.1e-05 0.00044 20.7 1.1 1 23 285 307 285 307 0.99

7 35 0.0004 0.0057 17.2 1.1 1 23 312 334 312 334 0.99

8 35 0.21 2.9 8.6 3.3 1 23 339 361 339 361 0.98

9 35 0.25 3.6 8.3 2.0 1 23 366 388 366 388 0.98

10 35 0.002 0.028 15.0 0.9 1 23 393 415 393 415 0.99

11 35 0.00024 0.0033 17.9 1.0 1 23 420 442 420 442 0.98

12 35 0.063 0.89 10.3 2.7 1 23 447 469 447 469 0.98

13 35 0.26 3.7 8.3 3.0 1 23 474 496 474 496 0.98

14 35 1e-05 0.00014 22.2 1.8 1 23 501 523 501 523 0.98

15 35 0.00054 0.0076 16.8 2.0 1 23 528 550 528 550 0.98

16 35 0.0079 0.11 13.1 0.4 1 23 555 577 555 577 0.99

17 35 2.4e-05 0.00035 21.0 1.7 1 23 582 604 582 604 0.99

18 35 0.19 2.6 8.8 0.3 1 21 609 629 609 630 0.94

19 35 0.044 0.63 10.7 1.0 1 23 636 658 636 658 0.98

20 35 0.17 2.4 8.9 3.3 1 23 663 685 663 685 0.99

21 35 0.044 0.63 10.7 1.0 1 23 690 712 690 712 0.98

22 35 0.0041 0.058 14.0 0.9 1 23 717 739 717 739 0.98

23 35 0.0005 0.007 16.9 1.2 1 23 744 766 744 766 0.99

24 35 2.8 39 5.1 0.4 1 19 771 789 771 792 0.94

25 35 0.038 0.53 11.0 1.7 2 23 820 841 819 841 0.96

26 35 9.6 1.4e+02 3.4 0.1 7 23 846 862 846 862 0.94

27 35 0.0044 0.062 13.9 0.4 1 23 867 889 867 889 0.98

28 35 0.0036 0.05 14.2 0.5 1 23 905 927 905 927 0.98

29 35 0.00055 0.0078 16.7 1.0 1 23 932 954 932 954 0.98

30 35 0.0041 0.058 14.0 0.9 1 23 970 992 970 992 0.98

31 35 0.04 0.57 10.9 1.7 2 23 998 1019 997 1019 0.96

32 35 0.04 0.57 10.9 1.7 2 23 1043 1064 1042 1064 0.96

33 35 0.043 0.61 10.8 1.4 2 23 1088 1109 1087 1109 0.96

34 35 0.0044 0.062 13.9 0.4 1 23 1125 1147 1125 1147 0.98

35 35 0.0033 0.047 14.3 0.5 1 23 1163 1185 1163 1185 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	35	0.0072	0.1	13.2	1.6	1	23	150	172	150	172	0.98
2	35	0.0092	0.13	12.9	1.4	1	23	177	199	177	199	0.98
3	35	0.00059	0.0084	16.6	1.6	1	23	204	226	204	226	0.99
4	35	0.25	3.5	8.4	3.1	1	23	231	253	231	253	0.98
5	35	0.064	0.91	10.2	2.3	1	23	258	280	258	280	0.98
6	35	3.1e-05	0.00044	20.7	1.1	1	23	285	307	285	307	0.99
7	35	0.0004	0.0057	17.2	1.1	1	23	312	334	312	334	0.99
8	35	0.21	2.9	8.6	3.3	1	23	339	361	339	361	0.98
9	35	0.25	3.6	8.3	2.0	1	23	366	388	366	388	0.98
10	35	0.002	0.028	15.0	0.9	1	23	393	415	393	415	0.99
11	35	0.00024	0.0033	17.9	1.0	1	23	420	442	420	442	0.98
12	35	0.063	0.89	10.3	2.7	1	23	447	469	447	469	0.98
13	35	0.26	3.7	8.3	3.0	1	23	474	496	474	496	0.98
14	35	1e-05	0.00014	22.2	1.8	1	23	501	523	501	523	0.98
15	35	0.00054	0.0076	16.8	2.0	1	23	528	550	528	550	0.98
16	35	0.0079	0.11	13.1	0.4	1	23	555	577	555	577	0.99
17	35	2.4e-05	0.00035	21.0	1.7	1	23	582	604	582	604	0.99
18	35	0.19	2.6	8.8	0.3	1	21	609	629	609	630	0.94
19	35	0.044	0.63	10.7	1.0	1	23	636	658	636	658	0.98
20	35	0.17	2.4	8.9	3.3	1	23	663	685	663	685	0.99
21	35	0.044	0.63	10.7	1.0	1	23	690	712	690	712	0.98
22	35	0.0041	0.058	14.0	0.9	1	23	717	739	717	739	0.98
23	35	0.0005	0.007	16.9	1.2	1	23	744	766	744	766	0.99
24	35	2.8	39	5.1	0.4	1	19	771	789	771	792	0.94
25	35	0.038	0.53	11.0	1.7	2	23	820	841	819	841	0.96
26	35	9.6	1.4e+02	3.4	0.1	7	23	846	862	846	862	0.94
27	35	0.0044	0.062	13.9	0.4	1	23	867	889	867	889	0.98
28	35	0.0036	0.05	14.2	0.5	1	23	905	927	905	927	0.98
29	35	0.00055	0.0078	16.7	1.0	1	23	932	954	932	954	0.98
30	35	0.0041	0.058	14.0	0.9	1	23	970	992	970	992	0.98
31	35	0.04	0.57	10.9	1.7	2	23	998	1019	997	1019	0.96
32	35	0.04	0.57	10.9	1.7	2	23	1043	1064	1042	1064	0.96
33	35	0.043	0.61	10.8	1.4	2	23	1088	1109	1087	1109	0.96
34	35	0.0044	0.062	13.9	0.4	1	23	1125	1147	1125	1147	0.98
35	35	0.0033	0.047	14.3	0.5	1	23	1163	1185	1163	1185	0.99

Sequence Information

Coding Sequence: ATGGATATTGACTCGGTAgactttattgaaagttgtgctataaaatcagaagtgcTTTTAACAGAGACATTTTCTATTTGTGAGGAATACGAAGAGAGTGGGAGTAAGGAACTGAAACCAGAGCCACTAGAGTATGAAGAATTGCTTAAacctaaagaagaaaatgatctgGCAGAATCTATACATGCTGCTCCGAAGCAACGAGAATTTTGTAGTGACTCTAATTTTGTAACTATTGGAGAAAATTCTCAAATAGAACATTTGAAAGTTactaaaaacgttaaatacAGTTGTAAGCaatgtaactttacaacccAGTTAAAATGTTCTATAAAAGAGCATACGAGGATTCACAACGATGGATATAATATTGAAGGATGTAATTTCAAGATGCCACATATATTCTCTCTATCCTCACAATTGAAAACTCCAAGAAATGGAAATGAATTTGTTTGtgttgaatgtaattatactacatttaacaaaaattatctaaagaGTCATCTGAAAATTCACAAAAGTGCTGCATATAGTTGcgagaaatgtgattataatacacGGCGGAAAATTTACTTCACAGCACATGCTAAAATTCattctggtaatgaatataagtgtaaaaaatgtaattataaagcaGTGAGAAAAagtgatctaatgcaacatgtcaaaattcatgcgGGTGCCgtatataagtgcaaagaatgtgattttaaaacagtatggagaaatcatctaaagcaacatgtcaaaatccatACAGATGACGCATATATGTGTAAagaatgtcattataaaaccatatggaaaagtaatctaatgcaacatgtcaaaattcatgcaggtgatgtatataagtgtaaagaatgtgattataaaactgtacagaaaagtaatctaatacaacatgtcaaaattcatacaggtaatgaatataagtgtaaagaatgtgagtataaaacTATACGGAAAAGTGATTTACtacaacatgtcaaaattcatacaggtgatggatacaagtgtaaagaatgtgattttaaaacaatatggaaaaatcatctaaagcaacatgttaaaattcatacagatgacaaatataagtgtaacgaatgtgattttaaaacagtatggatAAGacatctaaagcaacatatcaaaattcatacaggtgatgaatataagtgtaaagaatgtgactataaaactgtatggagAAGTAATCTAAaagaacatatcaaaattcatacaggtgatgaatataagtgtaaagaatgcgattttaaaactgtacggaaaagtgatctagtgcaacatgtcaaaattcatacaggtgaaaaatataagtgtaatgaatgtaattttaaaacagtatggaaaagtcatctaaaggaacatgtcaaaattcattcaggtaatgaatataagtgtaaagaatgtgattttaagacagtatggaaaaatcatctaaagcaacatgcCAAAGtgcatacaggtgacgaatataagtgtaaagaatgtgattataaaactgtacagaaaagtaatttaaagcgACATGTCAacattcatactggtgacaagtataagtgtaaagaatgcgattataaaacagtaaggaTGGATAGTTTAAAGCGACATGTCAAAAATCATACGggtgataaatataaatgtaaagaatgtgattatcaaACTGCATGGAAAAGTGATCTGACgctacatatcaaaattcatacaggtgatgaatataagtgtaaagaatgtgattataaaactgtacggaaaagtaatctaaaagaacatgtcaaaattcatacaaatgatgaatataagtgtaaagggTGTGACTATAAAATAGTGAAGATAGATAGTTTTAAACGACATGCCAAAATTTGTACAGGTGAtggatataagtgtaaagaatgtgattataaaacagtatggaaaagtgatctaatgcaacactccaaaattcatacaggtaacgaatataagtgtaaagaatgtgattataaaacagtatggaaaaagtgtctaaaggaacacatcaaaattcatacaggtgatgaatataagtgtaaagaatgtgattataaaactgtatggaaaagtgatctaatgcaacactccaaaattcataccggtaacgaatataagtgtaaagaatgtgattataaaacagtatggaaaagtaatctaaaggagcatgtcaaaattcataatggtgacaaatataagtgtaaagaatgtgattataaaacaacgaGGATAGGTAgtttaaagcaacatgtcaaaattcatacaggggatgaatttaaatgtatggaatgtgactacaaaacaccatggaagcagaATTTAAAGAATCATGCTGCACAGAACAGTTACTTTGAGCAACATGTCAATATTCATataagtaatcttaagcatcatgtcaaaattcatataggtgatgaatgtaagtgtaaagaatgtgattacaaagcAGTTAGGATAGATACTTTAAAGCAACATGTTAaagttcatacaggtgataaaaataaatgcaCTGCACAGAACAGTTACTttgagcaacatgtcaaaattcataatggtgacaaatataagtgtaaagaatgtgattacaaagcAGTTAGGATAGATActttaaagcaacatgtcaatatTCATataagtaatcttaagcatcatgtcaaaattcataatggtgacaaatataagtgtaaagaatgtgattacaaagcAGTTAGGATAGATActttaaagcaacatgtcaaaattcataatggtgacaaatataagtgtaaagaatgtgattataaaacaacgaGGATAGGTAgtttaaagcaacatgtcaatatTCATataagtaatcttaagcatcatgtcaaaattcataatggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaagtaatctaaaggagcatgtcaaaattcatataggtgatgaatgtaagtgtaaagaatgtgattacaaagcAGTTAGGATAGATActttaaagcaacatgtcaaaattcatataggtgatgaatCTGCACAGAACAGTTACTttgagcaacatgtcaaaattcatataggtgatgaatgtaagtgtaaagaatgtgattacaaagcAGTTAGGATAGATActttaaagcaacatgtcaaaattcatataggtgatgaatCTGCACAGAACAGTTACTttgagcaacatgtcaaaattcatataggtgatgaatgtaagtgtaaagaatgtgattacaaagcAGTTAGGATAGATActttaaagcaacatgtcaatatTCATataagtaatcttaagcatcatgtcaaaattcataatggtgacaaatataagtgtaaagaatgtgattacaaagcAGTTAGGATAGATActttaaagcaacatgtcaatatTCATataagtaatcttaagcatcatgtcaaaattcataatggtgacaaatataagtgtaaagaatgtgattacaaagcAGTTAGGATAGATACTTTAAAGCAACATGTTAaagttcatacaggtgataaaaataaataa
Protein Sequence: MDIDSVDFIESCAIKSEVLLTETFSICEEYEESGSKELKPEPLEYEELLKPKEENDLAESIHAAPKQREFCSDSNFVTIGENSQIEHLKVTKNVKYSCKQCNFTTQLKCSIKEHTRIHNDGYNIEGCNFKMPHIFSLSSQLKTPRNGNEFVCVECNYTTFNKNYLKSHLKIHKSAAYSCEKCDYNTRRKIYFTAHAKIHSGNEYKCKKCNYKAVRKSDLMQHVKIHAGAVYKCKECDFKTVWRNHLKQHVKIHTDDAYMCKECHYKTIWKSNLMQHVKIHAGDVYKCKECDYKTVQKSNLIQHVKIHTGNEYKCKECEYKTIRKSDLLQHVKIHTGDGYKCKECDFKTIWKNHLKQHVKIHTDDKYKCNECDFKTVWIRHLKQHIKIHTGDEYKCKECDYKTVWRSNLKEHIKIHTGDEYKCKECDFKTVRKSDLVQHVKIHTGEKYKCNECNFKTVWKSHLKEHVKIHSGNEYKCKECDFKTVWKNHLKQHAKVHTGDEYKCKECDYKTVQKSNLKRHVNIHTGDKYKCKECDYKTVRMDSLKRHVKNHTGDKYKCKECDYQTAWKSDLTLHIKIHTGDEYKCKECDYKTVRKSNLKEHVKIHTNDEYKCKGCDYKIVKIDSFKRHAKICTGDGYKCKECDYKTVWKSDLMQHSKIHTGNEYKCKECDYKTVWKKCLKEHIKIHTGDEYKCKECDYKTVWKSDLMQHSKIHTGNEYKCKECDYKTVWKSNLKEHVKIHNGDKYKCKECDYKTTRIGSLKQHVKIHTGDEFKCMECDYKTPWKQNLKNHAAQNSYFEQHVNIHISNLKHHVKIHIGDECKCKECDYKAVRIDTLKQHVKVHTGDKNKCTAQNSYFEQHVKIHNGDKYKCKECDYKAVRIDTLKQHVNIHISNLKHHVKIHNGDKYKCKECDYKAVRIDTLKQHVKIHNGDKYKCKECDYKTTRIGSLKQHVNIHISNLKHHVKIHNGDKYKCKECDYKTVWKSNLKEHVKIHIGDECKCKECDYKAVRIDTLKQHVKIHIGDESAQNSYFEQHVKIHIGDECKCKECDYKAVRIDTLKQHVKIHIGDESAQNSYFEQHVKIHIGDECKCKECDYKAVRIDTLKQHVNIHISNLKHHVKIHNGDKYKCKECDYKAVRIDTLKQHVNIHISNLKHHVKIHNGDKYKCKECDYKAVRIDTLKQHVKVHTGDKNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -