Basic Information

Insect: Lamprigera yunnana
Gene Symbol: ZNF236
Assembly: GCA_013368075.1
Location: JABVZV010002131.1:3461271-3486317[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.042 0.6 10.8 1.7 1 23 128 150 128 150 0.98

2 23 0.016 0.22 12.2 0.5 1 23 156 178 156 178 0.98

3 23 9e-05 0.0013 19.2 0.1 2 23 184 205 184 205 0.97

4 23 0.078 1.1 10.0 1.1 2 23 248 269 247 269 0.96

5 23 3.5e-05 0.0005 20.5 1.5 1 23 294 316 294 316 0.99

6 23 0.0001 0.0014 19.1 0.6 1 23 322 344 322 344 0.97

7 23 0.00062 0.0088 16.6 2.1 1 23 350 373 350 373 0.97

8 23 0.019 0.27 11.9 2.2 1 23 383 406 383 406 0.96

9 23 6e-06 8.5e-05 22.9 0.6 1 23 485 507 485 507 0.98

10 23 9.1e-05 0.0013 19.2 6.2 1 23 513 535 513 535 0.99

11 23 0.0078 0.11 13.1 0.5 1 23 541 563 541 563 0.97

12 23 0.004 0.056 14.0 1.4 1 23 574 596 574 596 0.98

13 23 3.3e-05 0.00046 20.6 1.4 1 23 644 666 644 666 0.98

14 23 2e-05 0.00028 21.3 2.1 1 23 699 721 699 721 0.98

15 23 0.96 14 6.5 5.4 1 23 727 749 727 749 0.95

16 23 0.041 0.58 10.8 0.7 1 23 1127 1149 1127 1149 0.98

17 23 1.3e-06 1.9e-05 25.0 4.0 2 23 1154 1175 1153 1175 0.97

18 23 2.7e-05 0.00038 20.9 2.3 1 23 1181 1203 1181 1203 0.99

19 23 0.00018 0.0026 18.2 1.8 1 23 1211 1233 1211 1233 0.98

20 23 0.00054 0.0077 16.8 3.2 1 23 1239 1261 1239 1261 0.99

21 23 7.3e-05 0.001 19.5 2.3 1 23 1451 1473 1451 1473 0.98

22 23 0.0029 0.041 14.5 0.7 1 23 1479 1501 1479 1501 0.98

23 23 0.02 0.29 11.8 3.5 1 23 1507 1530 1507 1530 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.042	0.6	10.8	1.7	1	23	128	150	128	150	0.98
2	23	0.016	0.22	12.2	0.5	1	23	156	178	156	178	0.98
3	23	9e-05	0.0013	19.2	0.1	2	23	184	205	184	205	0.97
4	23	0.078	1.1	10.0	1.1	2	23	248	269	247	269	0.96
5	23	3.5e-05	0.0005	20.5	1.5	1	23	294	316	294	316	0.99
6	23	0.0001	0.0014	19.1	0.6	1	23	322	344	322	344	0.97
7	23	0.00062	0.0088	16.6	2.1	1	23	350	373	350	373	0.97
8	23	0.019	0.27	11.9	2.2	1	23	383	406	383	406	0.96
9	23	6e-06	8.5e-05	22.9	0.6	1	23	485	507	485	507	0.98
10	23	9.1e-05	0.0013	19.2	6.2	1	23	513	535	513	535	0.99
11	23	0.0078	0.11	13.1	0.5	1	23	541	563	541	563	0.97
12	23	0.004	0.056	14.0	1.4	1	23	574	596	574	596	0.98
13	23	3.3e-05	0.00046	20.6	1.4	1	23	644	666	644	666	0.98
14	23	2e-05	0.00028	21.3	2.1	1	23	699	721	699	721	0.98
15	23	0.96	14	6.5	5.4	1	23	727	749	727	749	0.95
16	23	0.041	0.58	10.8	0.7	1	23	1127	1149	1127	1149	0.98
17	23	1.3e-06	1.9e-05	25.0	4.0	2	23	1154	1175	1153	1175	0.97
18	23	2.7e-05	0.00038	20.9	2.3	1	23	1181	1203	1181	1203	0.99
19	23	0.00018	0.0026	18.2	1.8	1	23	1211	1233	1211	1233	0.98
20	23	0.00054	0.0077	16.8	3.2	1	23	1239	1261	1239	1261	0.99
21	23	7.3e-05	0.001	19.5	2.3	1	23	1451	1473	1451	1473	0.98
22	23	0.0029	0.041	14.5	0.7	1	23	1479	1501	1479	1501	0.98
23	23	0.02	0.29	11.8	3.5	1	23	1507	1530	1507	1530	0.97

Sequence Information

Coding Sequence: ATGAATGTTGTTGAGGTTTCTAAGAAAGATAGTCCAATCCAAATCTTTACATATATTGGAATTCCCGTTGACTCTTTGCAACAGTGCAACAATGCAACTCTAACGTTATCCGATggacaaagtttatttttgaatgcCACTTCAGATACTCTGCATCACTCACAGAGTAATGatactgtaaaatttgtatCAATTGATAAAAGTCTACAAAATATTAATGATAGGATATGCATAAAAAGACAATCTGTGATAGAAGAAAACCAACCGAAACAATTTAGtagtgatacaacttttttaaaatcagAAGAGAAATTAATGGTGAAGTATTCGACAGCAAACTCTGGTGgatcaaatagttttaataaagaTGAGTGTAGTTTCTTCAAATGCCCACAATGTGACTTGGTTCTTGAAAAATTATGCCTTTATCGAAAGCACATGGAAATGCATAAAAATACCAAGAAATACAAATGTGATCAGTGTTCTAATAGTTACAATGTTGAAGTTAACTTAAAACTTCACATGTCCTTGCATGTGAAGAGTAGACCTACTTGCCCAGTatgtgataaaaaatttcaaagattaGCTAGTTTAAAAGCCCATATAATTGTACACGAAGTGGACGAAACCTTTACTTGCATTCACTGTTTGTCCGAGTTTGATTTGGAGGATGACTATAATAATCACATGGAAAAGCATAATCAAAGAAAAGTTGGTAGTGCAGTTAACAATACCTTATTAGAATGTTCAATTTGTAAACATGTTTTTCAGAATGCAGAACAACGCAAAGAACATATTTCTTCTCATTTGAAAattaaaaaatcaGCGAGTAATGGGAAGCGACAAAAGAGAAAACCAACTGCAAATAAACAACATAAGTATCAGTGTGAGGTATGTGATAAATCTTTTCCGAAGTATTGCCTATTAGAAAGGCATGTGAGAGTACACAGTGGTGAAAAACCTTTTGCCTGTCACTTATGTGAGCGTGCATTTGCCCAAAAGGGAACATTACAAATTCATATTATGCGGCATACTGGTGTACGTCCTTTTCGTTGTACTTTGTGCTCAGCAACATTTTGTCAAAGAGgtaaTCTTAGGGTTCATATAGCAAAAACTCACGTCATTCCAGCTCCAGgagaaaaagtttttaaatgttccaTGTGCACgtgtgtttttaaaaaagtggCTTCGTTAAACGCACATACGTCAAAAGCTCATGCTCGGGAACGACAATGTGATGATGTTTCAGATATAatagtagaattaaaaaaacttgaaaatcaTATGCAGCTGAAAAACTGCAATCAAAAGCAAGCagatttaatacaaaaaaatgtaacaaaagaaACTGATGGAAATTCCGTGAAATATGTGAAATTAGTTGATCACAGTGTTGAGGGTAATTTTCGTCGTTTTTTGGTTAAGAAACGAGGGGCTGGTCAACACCAATGGTATATTTGCTCTTTTTGCTCCAAAGAATTTAAGAAACCTTCAGACTTAATAAGGCATATTAGAGTTCACACAAGAGAGAAGCCGTTTAAAtgTAAACATTGTGATCAAGCGTTTTCATTGAAATCCACTTTGTCCCATCATATGAATACTCATACGGCGAAAAGACACTATCAGTGCATAGTTTGTCTAAAAATGTTCACATCAATTAAAGCTTTAAAGGCTCATCTTAGGAGACATATGCATGGTAAAGCAAAGCAGATAAATTATTACATGTGCCCCAAGTGCAATAAAGTTTATAATTCAGTTACTAAAATGAAACTTCATATAAAATACCATGCTGACAATGAAGAACCAGTAAAAACTCAGCCTATAACTGAAGTTATAATGCAACAACCTATGATGGAAACTGCTAATGGATTATTACCTATCACCCCATCTACATTAAGTAAGACTTTTACCCAAGAAAAACCTAGACCATACAAATGTCAAGTATGTGAAGCATCATTTACTCGCACTGTTCATCTTAGAAGGCATATGGCGATTCACTCTGGAGAACGCAAATTTAATTGCGAGATTTGTAAAAAGTGGTTTTGTCACTCTTACGCAAAggatcatatgaaaattcatattggGGAAAAGACTTTTGAGTGCAAAGATTGTGGAAAAAAGTTTCGAAGTAACACTGTATTGAAACGACACTTAACTTCACATAGTTATGATAGACTCTATGTGTGCCCTTATTGCAGAAAACATTTTAAGACTATTTTAATGTGTCGTAAACACATTAATCTACATAAGGAAGATCTTGAAGTAGAACAATTTAGAGTTAAAGATGGTGAAATCATTGCTAATATACATAAATCGATACCTATAAATGAATCAAATCAAGTGTTTTCCCTTAAATCAAACAAGGCCCTACAAgagtcaaaaatattatttactgaTGTTGAGAAAGGAATCATTATATCAACATCCATTGACACTGGAACAGAGgaTAACAATCTTCTTcaagaaaatattaatcaaacAGAAATGTGTTCagcaataattgaaaaatgcgAAACCTTACCCTTATTAACTGATGACCCAACCCAAAATATTTTGGATCCAGTAGAAGACACACCTGTGCATAGTACCAATATAGATGCCAGTGATAATGGTTTCCCTTCAGTCTATGTAAATTCTGACGATCTGCAAACTCTATCGTCTACAAATGTATACAATGCTTGTTTATCACGATTAAAAACTAAAGATCCACTCTTAGTTAGTGGATTAAATGGAATTCAAGATCCGAATTTATTATTCTCGACAGATCCAACTTTAACCCATATAACTAATTCCCAGTTAGATTCCCataatttagaaacattaattccgactttaaattttagtaatagTTTATCTTTGAATCAATCTTTTCCTAATATAGTTTTAACCAATCTAGATGATAATGAAGTAAATCAGTTTCCACTTTTCTCAAACAtcaatgaatttaatacaaaatctcAAAGCaacagtaaattcattgaagttGATAATCCTAAATTTATAATCGATTCCAATTTAATTGGTTTAGCAGATAATTCTTCCGTTGGAAGTACAATCATATCAAATCTTTATAGTAATGCAAGCCTGAATGTAGTAGAAACCAAAGAGCAAACAAATACAGTTTCGTTTCCTTTATCTTCTAATACACTTAGTTTAATTTGTTCTTATTGCAAACAAAGTATGAAAGACTCATCAGATTGTAAAGATCACATTTGCACGATCACTACTGCAGAAAgcagtgaaaataaaattacatcagTAAAATTTAGcactaataaaaagaaaaaaaggacaaagtctaaatcaaaccaacccaaaaaaaattatTATAAGAAGTTCAAAGAAGATGTTGGCACCTCTGGCGATGCTAAAGAAAAGTACAAATGCACATTATGTGATAATGTGGCACCTAATAAAGGAACATTTACTCGTCATTTTCTGACACACAGCGTTATAAAGGAGTGCACATATTGCGGAAAGCATTTCAAGAAACGCTCTGATTTGgaAAGGCATATAAGAACACATACTGGAGAAAAACCTTATAAATGTGATAAGTGTGAAAAAAGGTTCTCTCTTAAATCTACGTTAGATTCCCATATTAGAACACACAAACCAGGTGGAAATAAGGATTTTAGTTGTGCTGTTTGTAATTCATGTTTTAGTTCAAAGTCAAGTCTCAGAGTTCATATTTTAATGCATACAGgaGTACGGCCTTATCAGTGCTCGCTATGCCCTGAAAAATTTCGTACATCTGGACACCGGAAATCTCACATGAATAGTCATTCCAAACAAAATGGCACTAAAAAAGTAGGACAATCTAAATCTGCTAAAATTAAGTTGCTGGATTCTGTCGCTATGCAGGCTTCAGTTGTAGAAGAAAATCCCTCTGTTGAAGTTACACCGCTTTTGGATATTAAGGTACTGCTGGTACAAGGTCGTTATAATTCAAGTGATGCTACTCACAGAGTGTGGACTGTAATGATATTTAGTAAAtgcgttaataaagaaatgatgCTAACCCTTACAATATTCAGATTCCGAATGGATAGAGAATCTTTACAAGTGCTCTTGGAAGAGTCAGTTCCCAGTGAAGCTATAGAAGTTGATCCAATTTTCTTGCAACAGTTGCAACTAAACAATATATTATTGCAAGACAACATAGATGAAGAATTGACATCTTTTATTCAAGTTGATGTTAATAATGATGGACAAATAACAGATGTAAAATCAATATCCAACGATTTGTTAAgtcatttaaacaattttgacaCACAATTAGAAAATGAAGTGATAGCAAGCAACGTAGATATTAATTATGATCTAgacaataaaattagtaaacctAAAACATTTGAATGcaacatttgtaataaaaaatatagtagtAAATCAGTATTAACCAAACATAAAAAGATACACATAAGGAATAGTTcttttaaatgtacaaaatgtgatAGCCAGTTTTCTACAGGGGCCGatttagaaaatcatttaaaacttCATTCAGGGTATAGACCATTTTGTTGTCAACTATGTGCCAACACATTTAGAGAagagaaaaatctaaaaacccACATGAGAAGAATTCATGGATttgtataa
Protein Sequence: MNVVEVSKKDSPIQIFTYIGIPVDSLQQCNNATLTLSDGQSLFLNATSDTLHHSQSNDTVKFVSIDKSLQNINDRICIKRQSVIEENQPKQFSSDTTFLKSEEKLMVKYSTANSGGSNSFNKDECSFFKCPQCDLVLEKLCLYRKHMEMHKNTKKYKCDQCSNSYNVEVNLKLHMSLHVKSRPTCPVCDKKFQRLASLKAHIIVHEVDETFTCIHCLSEFDLEDDYNNHMEKHNQRKVGSAVNNTLLECSICKHVFQNAEQRKEHISSHLKIKKSASNGKRQKRKPTANKQHKYQCEVCDKSFPKYCLLERHVRVHSGEKPFACHLCERAFAQKGTLQIHIMRHTGVRPFRCTLCSATFCQRGNLRVHIAKTHVIPAPGEKVFKCSMCTCVFKKVASLNAHTSKAHARERQCDDVSDIIVELKKLENHMQLKNCNQKQADLIQKNVTKETDGNSVKYVKLVDHSVEGNFRRFLVKKRGAGQHQWYICSFCSKEFKKPSDLIRHIRVHTREKPFKCKHCDQAFSLKSTLSHHMNTHTAKRHYQCIVCLKMFTSIKALKAHLRRHMHGKAKQINYYMCPKCNKVYNSVTKMKLHIKYHADNEEPVKTQPITEVIMQQPMMETANGLLPITPSTLSKTFTQEKPRPYKCQVCEASFTRTVHLRRHMAIHSGERKFNCEICKKWFCHSYAKDHMKIHIGEKTFECKDCGKKFRSNTVLKRHLTSHSYDRLYVCPYCRKHFKTILMCRKHINLHKEDLEVEQFRVKDGEIIANIHKSIPINESNQVFSLKSNKALQESKILFTDVEKGIIISTSIDTGTEDNNLLQENINQTEMCSAIIEKCETLPLLTDDPTQNILDPVEDTPVHSTNIDASDNGFPSVYVNSDDLQTLSSTNVYNACLSRLKTKDPLLVSGLNGIQDPNLLFSTDPTLTHITNSQLDSHNLETLIPTLNFSNSLSLNQSFPNIVLTNLDDNEVNQFPLFSNINEFNTKSQSNSKFIEVDNPKFIIDSNLIGLADNSSVGSTIISNLYSNASLNVVETKEQTNTVSFPLSSNTLSLICSYCKQSMKDSSDCKDHICTITTAESSENKITSVKFSTNKKKKRTKSKSNQPKKNYYKKFKEDVGTSGDAKEKYKCTLCDNVAPNKGTFTRHFLTHSVIKECTYCGKHFKKRSDLERHIRTHTGEKPYKCDKCEKRFSLKSTLDSHIRTHKPGGNKDFSCAVCNSCFSSKSSLRVHILMHTGVRPYQCSLCPEKFRTSGHRKSHMNSHSKQNGTKKVGQSKSAKIKLLDSVAMQASVVEENPSVEVTPLLDIKVLLVQGRYNSSDATHRVWTVMIFSKCVNKEMMLTLTIFRFRMDRESLQVLLEESVPSEAIEVDPIFLQQLQLNNILLQDNIDEELTSFIQVDVNNDGQITDVKSISNDLLSHLNNFDTQLENEVIASNVDINYDLDNKISKPKTFECNICNKKYSSKSVLTKHKKIHIRNSSFKCTKCDSQFSTGADLENHLKLHSGYRPFCCQLCANTFREEKNLKTHMRRIHGFV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -