Basic Information

Insect: Lamprigera yunnana
Gene Symbol: -
Assembly: GCA_013368075.1
Location: JABVZV010002264.1:880585-904510[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 33 0.00013 0.0018 18.7 0.6 1 23 92 114 92 114 0.99

2 33 0.065 0.92 10.2 0.6 1 23 119 141 119 141 0.98

3 33 0.03 0.43 11.3 2.5 1 23 146 168 146 168 0.98

4 33 0.07 1 10.1 1.7 1 23 173 195 173 195 0.99

5 33 1.6 22 5.9 3.4 1 23 200 222 200 222 0.97

6 33 0.0048 0.068 13.8 1.0 1 23 227 249 227 249 0.99

7 33 0.046 0.66 10.7 1.8 1 23 254 276 254 276 0.98

8 33 0.0039 0.055 14.1 0.6 1 23 290 312 290 312 0.98

9 33 0.0059 0.084 13.5 1.2 1 23 317 339 317 339 0.98

10 33 0.05 0.71 10.6 1.3 1 23 344 366 344 366 0.99

11 33 0.062 0.88 10.3 0.9 1 23 395 417 395 417 0.98

12 33 2.8 40 5.0 2.3 1 23 422 444 422 444 0.97

13 33 0.0048 0.068 13.8 1.0 1 23 449 471 449 471 0.99

14 33 0.046 0.66 10.7 1.8 1 23 476 498 476 498 0.98

15 33 0.0039 0.055 14.1 0.6 1 23 512 534 512 534 0.98

16 33 0.0059 0.084 13.5 1.2 1 23 539 561 539 561 0.98

17 33 0.05 0.71 10.6 1.3 1 23 566 588 566 588 0.99

18 33 0.062 0.88 10.3 0.9 1 23 617 639 617 639 0.98

19 33 0.059 0.84 10.3 0.3 1 23 644 666 644 666 0.98

20 33 0.0002 0.0028 18.1 0.9 1 23 671 693 671 693 0.98

21 33 0.017 0.24 12.1 2.2 1 23 698 720 698 720 0.98

22 33 2.3e-05 0.00033 21.1 1.7 1 23 1086 1108 1086 1108 0.99

23 33 3.9e-05 0.00055 20.3 1.4 1 23 1113 1135 1113 1135 0.99

24 33 3.9e-05 0.00055 20.3 1.4 1 23 1140 1162 1140 1162 0.99

25 33 3.9e-05 0.00055 20.3 1.4 1 23 1167 1189 1167 1189 0.99

26 33 7.3e-05 0.001 19.5 1.4 1 23 1194 1216 1194 1216 0.98

27 33 0.0001 0.0015 19.0 1.1 1 23 1221 1243 1221 1243 0.99

28 33 0.024 0.34 11.6 1.0 1 23 1248 1270 1248 1270 0.98

29 33 6.9e-05 0.00098 19.6 1.6 1 23 1275 1297 1275 1297 0.98

30 33 0.017 0.25 12.0 0.6 1 23 1302 1324 1302 1324 0.98

31 33 0.025 0.36 11.5 0.6 1 23 1329 1351 1329 1351 0.98

32 33 0.0058 0.082 13.5 0.9 1 23 1356 1378 1356 1378 0.98

33 33 4.5e-05 0.00063 20.2 1.4 1 23 1383 1405 1383 1405 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	33	0.00013	0.0018	18.7	0.6	1	23	92	114	92	114	0.99
2	33	0.065	0.92	10.2	0.6	1	23	119	141	119	141	0.98
3	33	0.03	0.43	11.3	2.5	1	23	146	168	146	168	0.98
4	33	0.07	1	10.1	1.7	1	23	173	195	173	195	0.99
5	33	1.6	22	5.9	3.4	1	23	200	222	200	222	0.97
6	33	0.0048	0.068	13.8	1.0	1	23	227	249	227	249	0.99
7	33	0.046	0.66	10.7	1.8	1	23	254	276	254	276	0.98
8	33	0.0039	0.055	14.1	0.6	1	23	290	312	290	312	0.98
9	33	0.0059	0.084	13.5	1.2	1	23	317	339	317	339	0.98
10	33	0.05	0.71	10.6	1.3	1	23	344	366	344	366	0.99
11	33	0.062	0.88	10.3	0.9	1	23	395	417	395	417	0.98
12	33	2.8	40	5.0	2.3	1	23	422	444	422	444	0.97
13	33	0.0048	0.068	13.8	1.0	1	23	449	471	449	471	0.99
14	33	0.046	0.66	10.7	1.8	1	23	476	498	476	498	0.98
15	33	0.0039	0.055	14.1	0.6	1	23	512	534	512	534	0.98
16	33	0.0059	0.084	13.5	1.2	1	23	539	561	539	561	0.98
17	33	0.05	0.71	10.6	1.3	1	23	566	588	566	588	0.99
18	33	0.062	0.88	10.3	0.9	1	23	617	639	617	639	0.98
19	33	0.059	0.84	10.3	0.3	1	23	644	666	644	666	0.98
20	33	0.0002	0.0028	18.1	0.9	1	23	671	693	671	693	0.98
21	33	0.017	0.24	12.1	2.2	1	23	698	720	698	720	0.98
22	33	2.3e-05	0.00033	21.1	1.7	1	23	1086	1108	1086	1108	0.99
23	33	3.9e-05	0.00055	20.3	1.4	1	23	1113	1135	1113	1135	0.99
24	33	3.9e-05	0.00055	20.3	1.4	1	23	1140	1162	1140	1162	0.99
25	33	3.9e-05	0.00055	20.3	1.4	1	23	1167	1189	1167	1189	0.99
26	33	7.3e-05	0.001	19.5	1.4	1	23	1194	1216	1194	1216	0.98
27	33	0.0001	0.0015	19.0	1.1	1	23	1221	1243	1221	1243	0.99
28	33	0.024	0.34	11.6	1.0	1	23	1248	1270	1248	1270	0.98
29	33	6.9e-05	0.00098	19.6	1.6	1	23	1275	1297	1275	1297	0.98
30	33	0.017	0.25	12.0	0.6	1	23	1302	1324	1302	1324	0.98
31	33	0.025	0.36	11.5	0.6	1	23	1329	1351	1329	1351	0.98
32	33	0.0058	0.082	13.5	0.9	1	23	1356	1378	1356	1378	0.98
33	33	4.5e-05	0.00063	20.2	1.4	1	23	1383	1405	1383	1405	0.99

Sequence Information

Coding Sequence: ATGGATGTGGATTCTGTAGAAAGAAGtgaaataaaatctgaagtgattttaacagaaacgtttTCATTCTGCGGGAAATATGAAGatcGTGATGGTGCCGAATTAAAAACAGAGTTCGTGAACGAATCATTGaaatgtaaagaagaagaagatctgGAAAACGACGATGCACATGCTGTTCCCATGCAACGATATTTCTACAAAGAATGTAATCAGaacacaataatcaaaaatcgCTCTACTAGGcaaatgaaaattcatacaagtgctGAATATACATGTaatgattgtgattataaagcaGTGCGGAAAGATAGTCTGAAGCAACAtgtcagaattcatacaggagacctatttaagtgtaaagaatgtgattttaaaacagcgtGGAAAattaatctaaaggaacatgtaagaATCCATACAggagataaatataagtgtaaagaatgtaattataaaacagcgtggaaaggtaatctaaagcatcatgtcaaaattcatacgagtgatgaatataagtgtaaaaactgTGATTATAGAACAATATGGGAacataatctaaaggaacatatcaatattcacacaggtgatgaatataagtgtaaaaactgtgattataaaacaatatgggaaCATAATCTAAAGACACataacaaaattcatacaggtgatgaatataaatgtaaagagtgtgattttaaaactgtatggaaaagtaatctcatgcaacatattaaaattcatacaagtgaaaaatataagtgtaaagattgtgattatgaaacagtgtggaaaaatcaactaaagaaacatgtcaaatatcatacaggtgatgaatataaatttgaagaatcaggtggtgaatataagtgtagagattgtgattataaaacaatgcgGCAAAGTGGTCTAATGCAACATGttgaaattcatacaagtgaccaatttaagtgtaaagaatgtgactttaaaacagtgTTGAAAGCTAGTCTTAAGCGGCatgccaaaattcatacaggtgatgaatataagtgcaaaaaCTGTGATTATACAACAATATGGGAACACAATTTAatggaacatatcaaaattcatacaggtgatgaatataagtgtaaagaatgtgattttaaaactgtacagaaaaagcatcatgtcaaaattcatacaggttaccaatttaagtgtaaagaatgtgattttaaaacagcgtGGAAAGGTAGTCTAAAGCGGCatgccaaaattcatacaggtgatgaatatataTGCAAAaactgtgattataaaacaatatgggaaCATAATCTAAAGACACataacaaaattcatacaggtgatgaatataaatgtaaagagtgtgattttaaaactgtatggaaaagtaatctcatgcaacatattaaaattcatacaagtgaaaaatataagtgtaaagattgtgattatgaaacagtgtggaaaaatcaactaaagaaacatgtcaaatatcatacaggtgatgaatataaatttgaagaatcaggtggtgaatataagtgtagagattgtgattataaaacaatgcgGCAAAGTGGTCTAATGCAACATGttgaaattcatacaagtgaccaatttaagtgtaaagaatgtgactttaaaacagtgTTGAAAGCTAGTCTTAAGCGGCatgccaaaattcatacaggtgatgaatataagtgcaaaaaCTGTGATTATACAACAATATGGGAACACAATTTAatggaacatatcaaaattcatacaggtggtTTAAATAAGTGTAAGGAGCGTGAGtttaaaactgtacagaaaatgcaacatttcaaaattcatacaggttaccaatttaagtgtaaagaatgtgattttaaaacagcgtGGAAAGGTAGTCTAAAGCGGCatgccaaaattcatacaggtgatgaatatataTGCAAAaactgtgattataaaacaatatgggaaGATAATCTAAAgtcacatatcaaaattcatacgggcgatgaatataagtgtaaagaatgtgactttaaaactgtacggaaagGTAATCTAatacaacatgtcaaaattcatacaggtgacaaatataagtgtaacgattGTGATTATGAAACGCCATGGAAAAGTCAACTTAAGAAGCATTTCAAAAaacatacagGTATTATTTTAGTGGTTGTGTATTGTTATGTGGAAAATTACCCCATGAAACAAGATCGGTCCATAAGTAAACGCGTTTTTCCTGTTAAGGATAAGGAGgctttgttaaattttgcacattttagaaattgttttgcaacaatgccattcacatcggagcaagacagatttattgtaatggctcactttcgaagtggtaCTCTTAATCCATTTGGAAagtggtcatattcactacaatcttacATCGAACCATTTATGAAACAATAtctagacgaaatgattgaatatgacatatttaaacagcacaaatgtagattagttcatcgatttgaaaccaaaaattgtatttgtaaaggaaagtcaactggtagaacTACTGttgtaacagaaaatgtaattgaaaatattcaagaacggataaatcgaagtccgaagaaagctgtatcgcagttatctcaacaaactggtccttcgCGTACGACCGAAGCTTGTGGTATAAGTATTAATACCCTTACCACAATAAAAAACAGGTTTAACGAAGctgaaattgaaaatcaatcagtACAGTGTTCGAGTCAACGTCCTAGATGCAAACCAAAATCTGTTGATGTTGACAATTATATTAAGGACTTTGTAAAGcgtaaaatatatgaaatgcaTACGAACCGTCGCCACATTACTGTTGAAAGTTTACGACAAGAAATTTTAGAGTCGGGTGTATTTACTTTTAGCAAAACGGGTTTGAAAAAGTTATTGCCTACccttggtttttcttttaaaaaagatGATGGTCGAAGAGGTTTGTTTGAATTGGAGCATACTGTTGCAAAGCGAgttgaatttttaaaggagtacataaaaaataaggaCTTGGAAGAgtcaaaaaaagatttaaaaaagggtttagaagattcaacttcaaatatatttcatttggaAGCTCTAGAATATCCACAATCCAACAACAGacaagaatgtgattttaaaacagtacggggaacatatcaaaatctacacagccaaatgttattaattatatcaaacctGAATTggactcgtttcttaatattaaaaattcatactggcgatgaatataagtgtaaagaatgtgattataaaacagtacagaaaagtaatctaaaggaacatttaaaaattcatactggcgatgaatataagtgtaaagaatgtgattataaaacagtacagaaaagtaatctaaaggaacatgtcaaaattcatactggcgatgaatataagtgtaaagaatgtgattataaaacagtacagaaaagtaatctaaaggaacatgtcaaaattcatactggcgatgaatataagtgtaaagaatgtgattataaaacagtacagaaaagtaatctaaaggaacatgtcaaaattcataccggtgacaaatataattgtaaagagtgtgattataaaacagtacagaaaagtaatctaaaggaacatttaaaaattcatactggcgatgaatataagtgtaaagaatgtgattataaaacagtacagcaaagtagtctaaaggaacatgtcaaaattcatactggtgatgaatataagtgtaaagagtgtgattataaaacggtatggaaaactaatttaatgcaacatgtcaaaattcatactggtgacgaatttaagtgtaaagaatgtgattataaatcagtacggaaaagtaatctaaaggaacatgtcaaaattcatactggtgatgaatataagtgtaaagaatgtgattataaaacgatatggaaaggtaatctaaaagaacatgtcaaaattcatactggtgacaaatataattgtaaagagtgtgattataaaacagcatggcaaagtagtctaaaggaacatttaaaaattcatacaggtgatgaatataagtgtaaagagtgtgattataaaacggtatggaaaagtaatctaatgcaacatgtcaaaattcatactggtgaccaatataagtgtaaagaatgtgattataaaacagtacagaaaagtaatctaatgcaacatgtcaaaattcatactggtgacaaatataattgtaaagagtgtgattataaaacagcatggcaagtagtctaa
Protein Sequence: MDVDSVERSEIKSEVILTETFSFCGKYEDRDGAELKTEFVNESLKCKEEEDLENDDAHAVPMQRYFYKECNQNTIIKNRSTRQMKIHTSAEYTCNDCDYKAVRKDSLKQHVRIHTGDLFKCKECDFKTAWKINLKEHVRIHTGDKYKCKECNYKTAWKGNLKHHVKIHTSDEYKCKNCDYRTIWEHNLKEHINIHTGDEYKCKNCDYKTIWEHNLKTHNKIHTGDEYKCKECDFKTVWKSNLMQHIKIHTSEKYKCKDCDYETVWKNQLKKHVKYHTGDEYKFEESGGEYKCRDCDYKTMRQSGLMQHVEIHTSDQFKCKECDFKTVLKASLKRHAKIHTGDEYKCKNCDYTTIWEHNLMEHIKIHTGDEYKCKECDFKTVQKKHHVKIHTGYQFKCKECDFKTAWKGSLKRHAKIHTGDEYICKNCDYKTIWEHNLKTHNKIHTGDEYKCKECDFKTVWKSNLMQHIKIHTSEKYKCKDCDYETVWKNQLKKHVKYHTGDEYKFEESGGEYKCRDCDYKTMRQSGLMQHVEIHTSDQFKCKECDFKTVLKASLKRHAKIHTGDEYKCKNCDYTTIWEHNLMEHIKIHTGGLNKCKEREFKTVQKMQHFKIHTGYQFKCKECDFKTAWKGSLKRHAKIHTGDEYICKNCDYKTIWEDNLKSHIKIHTGDEYKCKECDFKTVRKGNLIQHVKIHTGDKYKCNDCDYETPWKSQLKKHFKKHTGIILVVVYCYVENYPMKQDRSISKRVFPVKDKEALLNFAHFRNCFATMPFTSEQDRFIVMAHFRSGTLNPFGKWSYSLQSYIEPFMKQYLDEMIEYDIFKQHKCRLVHRFETKNCICKGKSTGRTTVVTENVIENIQERINRSPKKAVSQLSQQTGPSRTTEACGISINTLTTIKNRFNEAEIENQSVQCSSQRPRCKPKSVDVDNYIKDFVKRKIYEMHTNRRHITVESLRQEILESGVFTFSKTGLKKLLPTLGFSFKKDDGRRGLFELEHTVAKRVEFLKEYIKNKDLEESKKDLKKGLEDSTSNIFHLEALEYPQSNNRQECDFKTVRGTYQNLHSQMLLIISNLNWTRFLILKIHTGDEYKCKECDYKTVQKSNLKEHLKIHTGDEYKCKECDYKTVQKSNLKEHVKIHTGDEYKCKECDYKTVQKSNLKEHVKIHTGDEYKCKECDYKTVQKSNLKEHVKIHTGDKYNCKECDYKTVQKSNLKEHLKIHTGDEYKCKECDYKTVQQSSLKEHVKIHTGDEYKCKECDYKTVWKTNLMQHVKIHTGDEFKCKECDYKSVRKSNLKEHVKIHTGDEYKCKECDYKTIWKGNLKEHVKIHTGDKYNCKECDYKTAWQSSLKEHLKIHTGDEYKCKECDYKTVWKSNLMQHVKIHTGDQYKCKECDYKTVQKSNLMQHVKIHTGDKYNCKECDYKTAWQVV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -