Lyun001855.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lamprigera yunnana
Gene Symbol
ATPsynB
Assembly
GCA_013368075.1
Location
JABVZV010000247.1:2904952-2922406[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 36 0.03 0.42 11.3 3.1 1 23 68 90 68 90 0.97
2 36 0.12 1.8 9.3 0.2 1 23 95 117 95 117 0.97
3 36 0.0035 0.05 14.2 4.4 1 23 122 144 122 144 0.98
4 36 3.3 47 4.8 2.6 1 23 149 171 149 171 0.96
5 36 4.7e-06 6.6e-05 23.3 1.9 1 23 176 198 176 198 0.99
6 36 0.032 0.46 11.2 0.9 1 23 203 225 203 225 0.99
7 36 0.03 0.42 11.3 3.1 1 23 291 313 291 313 0.97
8 36 0.12 1.8 9.3 0.2 1 23 318 340 318 340 0.97
9 36 0.0035 0.05 14.2 4.4 1 23 345 367 345 367 0.98
10 36 3.3 47 4.8 2.6 1 23 372 394 372 394 0.96
11 36 4.7e-06 6.6e-05 23.3 1.9 1 23 399 421 399 421 0.99
12 36 0.032 0.46 11.2 0.9 1 23 426 448 426 448 0.99
13 36 0.0035 0.05 14.2 4.4 1 23 519 541 519 541 0.98
14 36 3.3 47 4.8 2.6 1 23 546 568 546 568 0.96
15 36 4.7e-06 6.6e-05 23.3 1.9 1 23 573 595 573 595 0.99
16 36 0.032 0.46 11.2 0.9 1 23 600 622 600 622 0.99
17 36 0.03 0.42 11.3 3.1 1 23 688 710 688 710 0.97
18 36 0.064 0.91 10.2 0.2 1 23 715 737 715 737 0.97
19 36 0.0035 0.05 14.2 4.4 1 23 742 764 742 764 0.98
20 36 3.3 47 4.8 2.6 1 23 769 791 769 791 0.96
21 36 4.7e-06 6.6e-05 23.3 1.9 1 23 796 818 796 818 0.99
22 36 0.026 0.37 11.5 1.1 1 23 823 845 823 845 0.99
23 36 0.03 0.42 11.3 3.1 1 23 911 933 911 933 0.97
24 36 0.064 0.91 10.2 0.3 1 23 938 960 938 960 0.97
25 36 0.0011 0.016 15.8 2.6 1 23 965 987 965 987 0.98
26 36 3.3 47 4.8 2.6 1 23 992 1014 992 1014 0.96
27 36 4.7e-06 6.6e-05 23.3 1.9 1 23 1019 1041 1019 1041 0.99
28 36 0.00034 0.0048 17.4 1.2 1 23 1046 1068 1046 1068 0.99
29 36 0.03 0.42 11.3 3.1 1 23 1134 1156 1134 1156 0.97
30 36 0.22 3.1 8.6 0.4 1 23 1161 1183 1161 1183 0.97
31 36 0.00021 0.003 18.1 2.1 1 23 1188 1210 1188 1210 0.99
32 36 0.12 1.6 9.4 0.8 1 23 1215 1237 1215 1237 0.98
33 36 2.9e-05 0.00042 20.7 1.1 1 23 1242 1264 1242 1264 0.99
34 36 0.00012 0.0017 18.8 2.0 1 23 1269 1291 1269 1291 0.99
35 36 0.00031 0.0044 17.5 1.5 1 23 1296 1318 1296 1318 0.98
36 36 0.052 0.73 10.5 0.9 1 23 1323 1345 1323 1345 0.98

Sequence Information

Coding Sequence
atggatgttgattctattgaaaattctgcaataaaatctgaagtgtTTTTAACACAAACGTTTTCCTTTTATGGAAAATACGAAGATTGTACGAGTACAGAATTAAAAACAGAACCAGTAGATTATGAAGAAtcatttaaatgtaaggaaGGAGATGATCATGTAGACCACATAGATACACATGCTGTTCCGATACAACAATATTTCTGTAATGACTGTAATTTTACTACATCAATCAAAAGTTGTCTTTGGagacatgtgaaaattcataaaggtgTTAAATATGCATGcaagaaatgtgattataaaacagtatggccGGGTAATTTAAAGAATCATGCCAATagtcatacaggtaatgaatataagtgtaaagaatgtgattataaaacagcgcaGAAAAATCACTTAAAGCAACATAGTAAAATACATACAGGTGTCGAGTATagatgtaaagaatgtgattataaaacagtgtgggaatattgtctaaagcaacatggcaaaatacatacaggtgaCGAGTATAAGTGTAATGAGTGTAACTATAAAACGGTACAGAAAGGTAATCTAAAGAAACacatgagaattcatacaggttacAAATATAAGTGCgacaaatgtgattataaggcagcgcaaaaatatattttaaagcaacatatcaaaatacatacaggtgatgaatataactaTAAAACGGCAAGAGAAATGTCATCTAAAGatacgtcaaaattcatacaggttacAAATACGAGTACGACTACAGAATTAAAAACAGAGTCAGAAGATTATGAAGAAtcatttaaatgtaaggaaGGAGATGATCATGTAGAGCACATAGATACACATGCTGTTCCGATACAACAATATTTCTGTAATGACTGTAATTTTACTACATCAATCAAAAGTTGTCTTTGGagacatgtgaaaattcataaaggtgTTAAATATGCATGcaagaaatgtgattataaaacagtatggccGGGTAATTTAAAGAATCATGCCAATagtcatacaggtaatgaatataagtgtaaagaatgtgattataaaacagcgcaGAAAAATCACTTAAAGCAACATAGTAAAATACATACAGGTGTCGAGTATagatgtaaagaatgtgattataaaacagtgtgggaatattgtctaaagcaacatggcaaaatacatacaggtgaCGAGTATAAGTGTAATGAGTGTAACTATAAAACGGTACAGAAAGGTAATCTAAAGAAACacatgagaattcatacaggttacAAATATAAGTGCgacaaatgtgattataaggcagcgcaaaaatatattttaaagcaacatatcaaaatacatacaggtgatgaatataactaTAAAACGGCAAGAGAAATGTCATCTAAAGatacgtcaaaattcatacaggttacAAATACGAGTACGACTACAGAATTAAAAACAGAGTCAGTAGGTTATGAAGAATCATCTAAATGTAAGGAAGGAGATGATCATGTAGAGCACATAGATACACATGCTCTTCCGATACAACAATATTTCTgtaatgaatataagtgtaaagaatgtgattataaaacagcgcaGAAAAATCACTTAAAGCAACATAGTAAAATACATACAGGTGTCGAGTATagatgtaaagaatgtgattataaaacagtgtgggaatattgtctaaagcaacatggcaaaatacatacaggtgaCGAGTATAAGTGTAATGAGTGTAACTATAAAACGGTACAGAAAGGTAATCTAAAGAAACacatgagaattcatacaggttacAAATATAAGTGCgacaaatgtgattataaggcagcgcaaaaatatattttaaagcaacatatcaaaatacatacaggtgatgaatataactaTAAAACGGCAAGAGAAATGTCATCTAAAGatacgtcaaaattcatacaggttacAAATACGAGTACGACTACAGAATTAAAAACAGAGTCAGTAGGTTATGAAGAATCATCTAAATGTAAGGAAGGAGATGATCATGTAGAGCACATAGATACACATGCTCTTCCGATACAACAATATTTCTGTAATGACTGTAATTTTACCACTTCAATCAAAAGTTGTCTTTGGagacatgtgaaaattcataaaggtgTTAAATATGCATGCaacaaatgtgattataaaacagtatggccGGGTAATTTAAAGAATCATGTCAATagtcatacaggtaatgaatataagtgtaaagaatgtgattataaaacagcgcaGAAAAATCACTTAAAGCAACATAGTAAAATACATACAGGTGTCGAGTATagatgtaaagaatgtgattataaaacagtgtgggaatattgtctaaagcaacatggcaaaatacatacaggtgaCGAGTATAAGTGTAATGAGTGTAACTATAAAACGGTACAGAAAGGTAATCTAAAGAAACacatgagaattcatacaggttacAAATATAAGTGCaacaaatgtgattataaggcagcgcaaaaatatattttaaagcaacatatcaaaatacatacaggtgatgaatataactaTAAAACGGCAAGAGAAATGTCATCTAAAGatacgtcaaaattcatacaggttacAAATACGAGTACGACTACAGAATTAAAAACAGAGTCAGTAGGTTATGAAGAATCATCTAAATGTAAGGAAGGAGATGATCATGTAGAGCACATAGATACACATGCTCTTCCGATACAACAATATTTCTGTAATGACTGTAATTTTACCACTTCAATCAAAAGTTGTCTTTGGagacatgtgaaaattcataaaggtgTTAAATATGCATGcaagaaatgtgattataaaacagtatggccGGGTAATTTAAAGAATCATGTCAATagtcatacaggtaatgaatataagtgtaaagaatgtgattataaaacagcgcaAAAATATAGCTTAAAGCAACATAGTAAAATACATACAGGTGTCGAGTATagatgtaaagaatgtgattataaaacagtgtgggaatattgtctaaagcaacatggcaaaatacatacaggtgacgagtataagtgtaatgaatgtaactataaaacggtACAGAAAGGTAATCTAAAGAAACacatgagaattcatacaggttacAAATATAAGTGcgaaaaatgtgattataaggcAGCGCAAAAATATAGCTtaaagcaacatatcaaaatacatacaggtgatgaatgtaactataaaatggTAAGAGAAATGTCATCTAAAGatacgtcaaaattcatacaggttacAAATATGAGTACGAGTACAGAATTAAAAACAGAGCCAGTAGATTATGAAGAAtcatttaaatgtaaggaaagagatgatcaTGTAGAGCACATAGATACACATGCTGTTCTGATACAACAATATTTCTGTAATGACTGTAATTTTACCACATCAATCAAAAGTTGTCTTTGGagacatgtgaaaattcataaaggtgTTAAATATGCATGCaacaaatgtgattataaaacagtatggtcCGGTAGTTTAAAGAATCATGTCAATAGTCATACAGGTTacgaatataagtgcaaagaatgtgattataaaacagcgcagaaaaattatttaaagcaacatatcaaaatacatacaggtgTTGAGTAtaggtgtaaagaatgtgattataaaactgtgtgggAATatagtctaaagcaacatgtcaaaatacatacaggtgatgagtataggtgtaatgaatgtaactataaaacggtACAGAAAGGTAATCTAAAGATacacatgaaaattcatacaggttacAAATATAAGTGcgaaaaatgtgattataaaacagcgcaaaaatatagtttaaagcagcatatcaaaatacatacaggtgaCGAGTATagatgtaaagaatgtgattataaaacagtgcggcaATAtagtctaaaagaacatgtaaaaatacatacaggtgatgagtataagtgtaaagaatgcgactATAAAGcagtgtggaaaaatcaattaaagagacatgtcaaaatacatataggtgatgaatataactaTAAAACGGCAGAAATGTCATTTAAAGGTCTTCACTCAAAATCTTTAGTATTTGCTGCATCAAGATGCTTATCTACCACCACACCAGTAAAGAAAGAGGCGGAATACGTAGCTCCTAAAGATGTTCAACGGCTGGTTCGACAAGAACCAGGAAAAGTTCGTATGGGTTTTATACCGGAGGAGttgtttactttcttttataaaaaaactggtGTCACTGGTCCATATACATTTGGTATCGGTGTAACCACGTATTTACTCAGCAAAGAGTTTTATGTTTTGGAACACGAATTTTACAATGGAAtatccttatttattttattgttaatcatTATTAAGAAGCTTGGTCCGCCAATTGCGCAGTTTTTAGATAAAGGAATCGACGATTACGAGACTGCTTTGAATTCTTCACGTGTGGCTGAAAAAGAAGGGCTGGGAGCTCAGATAGAGgctgagaaaaaaaatcaatggaGTGTAGATGGCCAATTAATGGTAGTTCATGCCAAACGTGAAAATGTGGCTTTACAGTTGGAAGCTGCATATCGTCAACGTCTCATGCATGTTTATGGTGAAGTTAAGAAACGTCTTGATTATCACTTTGAGCGTGAGAAAGTGGAACGTCGCATTGCCCAAAAGCATTTGGTCAACTGGGTTTTGCAGCACGTATTAGCGTCTATTACAACcgaacaagaaaaacaaaatatcgaTAAATGTATAGCAGATTTAGCAATAATGGgaaaagtataa
Protein Sequence
MDVDSIENSAIKSEVFLTQTFSFYGKYEDCTSTELKTEPVDYEESFKCKEGDDHVDHIDTHAVPIQQYFCNDCNFTTSIKSCLWRHVKIHKGVKYACKKCDYKTVWPGNLKNHANSHTGNEYKCKECDYKTAQKNHLKQHSKIHTGVEYRCKECDYKTVWEYCLKQHGKIHTGDEYKCNECNYKTVQKGNLKKHMRIHTGYKYKCDKCDYKAAQKYILKQHIKIHTGDEYNYKTAREMSSKDTSKFIQVTNTSTTTELKTESEDYEESFKCKEGDDHVEHIDTHAVPIQQYFCNDCNFTTSIKSCLWRHVKIHKGVKYACKKCDYKTVWPGNLKNHANSHTGNEYKCKECDYKTAQKNHLKQHSKIHTGVEYRCKECDYKTVWEYCLKQHGKIHTGDEYKCNECNYKTVQKGNLKKHMRIHTGYKYKCDKCDYKAAQKYILKQHIKIHTGDEYNYKTAREMSSKDTSKFIQVTNTSTTTELKTESVGYEESSKCKEGDDHVEHIDTHALPIQQYFCNEYKCKECDYKTAQKNHLKQHSKIHTGVEYRCKECDYKTVWEYCLKQHGKIHTGDEYKCNECNYKTVQKGNLKKHMRIHTGYKYKCDKCDYKAAQKYILKQHIKIHTGDEYNYKTAREMSSKDTSKFIQVTNTSTTTELKTESVGYEESSKCKEGDDHVEHIDTHALPIQQYFCNDCNFTTSIKSCLWRHVKIHKGVKYACNKCDYKTVWPGNLKNHVNSHTGNEYKCKECDYKTAQKNHLKQHSKIHTGVEYRCKECDYKTVWEYCLKQHGKIHTGDEYKCNECNYKTVQKGNLKKHMRIHTGYKYKCNKCDYKAAQKYILKQHIKIHTGDEYNYKTAREMSSKDTSKFIQVTNTSTTTELKTESVGYEESSKCKEGDDHVEHIDTHALPIQQYFCNDCNFTTSIKSCLWRHVKIHKGVKYACKKCDYKTVWPGNLKNHVNSHTGNEYKCKECDYKTAQKYSLKQHSKIHTGVEYRCKECDYKTVWEYCLKQHGKIHTGDEYKCNECNYKTVQKGNLKKHMRIHTGYKYKCEKCDYKAAQKYSLKQHIKIHTGDECNYKMVREMSSKDTSKFIQVTNMSTSTELKTEPVDYEESFKCKERDDHVEHIDTHAVLIQQYFCNDCNFTTSIKSCLWRHVKIHKGVKYACNKCDYKTVWSGSLKNHVNSHTGYEYKCKECDYKTAQKNYLKQHIKIHTGVEYRCKECDYKTVWEYSLKQHVKIHTGDEYRCNECNYKTVQKGNLKIHMKIHTGYKYKCEKCDYKTAQKYSLKQHIKIHTGDEYRCKECDYKTVRQYSLKEHVKIHTGDEYKCKECDYKAVWKNQLKRHVKIHIGDEYNYKTAEMSFKGLHSKSLVFAASRCLSTTTPVKKEAEYVAPKDVQRLVRQEPGKVRMGFIPEELFTFFYKKTGVTGPYTFGIGVTTYLLSKEFYVLEHEFYNGISLFILLLIIIKKLGPPIAQFLDKGIDDYETALNSSRVAEKEGLGAQIEAEKKNQWSVDGQLMVVHAKRENVALQLEAAYRQRLMHVYGEVKKRLDYHFEREKVERRIAQKHLVNWVLQHVLASITTEQEKQNIDKCIADLAIMGKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-