Lyun000450.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lamprigera yunnana
Gene Symbol
-
Assembly
GCA_013368075.1
Location
JABVZV010000047.1:1871911-1887072[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 47 0.062 0.88 10.3 1.7 1 21 41 61 41 62 0.95
2 47 0.54 7.6 7.3 2.8 1 23 224 246 224 246 0.95
3 47 8.7 1.2e+02 3.5 0.3 5 23 255 273 254 273 0.85
4 47 0.002 0.028 15.0 3.6 2 23 279 300 278 300 0.97
5 47 0.014 0.2 12.3 0.4 2 23 306 327 305 327 0.97
6 47 0.00011 0.0016 18.9 3.0 1 23 332 354 332 354 0.99
7 47 0.31 4.4 8.1 1.3 1 23 359 381 359 381 0.96
8 47 0.0073 0.1 13.2 1.3 1 23 386 408 386 408 0.98
9 47 0.0011 0.016 15.8 2.1 2 23 414 435 413 435 0.96
10 47 0.04 0.57 10.9 0.9 1 23 440 462 440 462 0.98
11 47 0.0016 0.023 15.3 1.8 1 23 467 489 467 489 0.99
12 47 0.00024 0.0034 17.9 1.1 2 23 495 516 494 516 0.97
13 47 0.00012 0.0017 18.8 1.7 2 23 522 543 521 543 0.97
14 47 0.00012 0.0017 18.8 1.7 2 23 549 570 548 570 0.97
15 47 0.074 1.1 10.0 0.9 2 23 576 597 575 597 0.97
16 47 0.076 1.1 10.0 1.5 2 23 603 624 602 624 0.97
17 47 0.002 0.029 15.0 2.2 1 23 629 651 629 651 0.99
18 47 0.00024 0.0034 17.9 1.1 2 23 657 678 656 678 0.97
19 47 0.0053 0.075 13.6 3.7 2 23 684 705 683 705 0.97
20 47 0.002 0.029 15.0 2.2 1 23 710 732 710 732 0.99
21 47 0.00012 0.0017 18.8 1.7 2 23 738 759 737 759 0.97
22 47 0.00012 0.0017 18.8 1.7 2 23 765 786 764 786 0.97
23 47 0.074 1.1 10.0 0.9 2 23 792 813 791 813 0.97
24 47 0.076 1.1 10.0 1.5 2 23 819 840 818 840 0.97
25 47 0.0019 0.026 15.1 4.0 1 23 845 867 845 867 0.98
26 47 0.0053 0.075 13.6 3.7 2 23 873 894 872 894 0.97
27 47 0.0099 0.14 12.8 2.3 1 23 1054 1076 1054 1076 0.97
28 47 0.0093 0.13 12.9 7.3 1 23 1081 1103 1081 1103 0.99
29 47 0.17 2.4 8.9 3.2 2 23 1109 1130 1108 1130 0.97
30 47 0.0044 0.062 13.9 0.3 2 23 1136 1157 1135 1157 0.96
31 47 0.094 1.3 9.7 1.9 2 23 1163 1184 1162 1184 0.96
32 47 0.0093 0.13 12.9 7.3 1 23 1189 1211 1189 1211 0.99
33 47 0.53 7.4 7.4 5.3 2 23 1217 1238 1216 1238 0.97
34 47 0.0093 0.13 12.9 7.3 1 23 1243 1265 1243 1265 0.99
35 47 0.071 1 10.1 3.1 2 23 1271 1292 1270 1292 0.97
36 47 0.0032 0.045 14.3 0.4 2 23 1298 1319 1297 1319 0.96
37 47 0.17 2.3 8.9 1.8 2 23 1325 1346 1324 1346 0.95
38 47 0.0053 0.075 13.6 8.7 1 23 1351 1373 1351 1373 0.99
39 47 0.025 0.36 11.5 2.1 2 23 1379 1400 1378 1400 0.97
40 47 0.08 1.1 9.9 4.4 2 23 1406 1427 1405 1427 0.96
41 47 0.2 2.8 8.7 2.6 2 23 1433 1454 1432 1454 0.96
42 47 0.022 0.31 11.7 0.6 2 23 1460 1481 1459 1481 0.96
43 47 0.0019 0.027 15.0 2.1 2 23 1487 1508 1486 1508 0.97
44 47 0.0018 0.026 15.1 3.0 2 23 1514 1535 1513 1535 0.96
45 47 0.0019 0.027 15.0 4.5 2 23 1541 1562 1540 1562 0.97
46 47 0.002 0.028 15.0 3.4 2 23 1568 1589 1567 1589 0.97
47 47 0.00048 0.0068 16.9 4.6 1 23 1594 1616 1594 1616 0.99

Sequence Information

Coding Sequence
ATGGATTATGGGAATACAGAAGTGAAATTAGAGCCAGTAAATATTGAAGACTATTTTAAATGCAACGAAGAAGATAACCTTTCAGAGCATATGCATTTATCTGCTCATCCTCTACAGCAATATACTTGTAATGATTGCAACTTTAGAACAACAGAAAATGATTGTCTAATAAAGCATCTACAAAGtgTTATTATTGTACTTGGACAACCATATACGAATTATAGAAATAAATCTTGGATTTATATAATGGATGTCGACTACAATGAAAGTTGtccaataaaatctgaagtaactctaacagaaacattttccttttgtgAAGAATACGGAGGTTATGGgaataaagaattgaaatcGGAGCCACTAGATATCAAAGAATATGTTAAATGCAAGGAAGAAGATAACCTTGCCGAGCATATGGAAGTATCTGCTGAACCAGTACAGCAATATACTTGCAATGATAGCAActttaaaacaacagaaaaGGATTGTCTAATAAAACATCTCAAAAGTACTAAAAACATTCAAGatttgtgtaaagaatgtaattttaaaactctATTGGAATGGAATGAAGATCGTCATGGAGTAGAtagtaagtgtaattttaaaacgCCTCAAATTATCTCTGTAACACAACAattgaaaactgtcgaaaatGGTGAACACTATATTTGTAATCAATGTGGTTTTAAAACACTATCAAAACATAAACTAAAAGTGCACATAAATAATCATATaggtaataaatataagtataaggaatgtgattttaaaacagagTGGAAATCTAATCTTAACAATCATACAAAAATTCACTCAGGTGATAAgttgaagtgtaaagaatgtgactacaaaactcctaATAAACATCGATTAAAAcaacatatgagaattcatacaggcgatgaatggaagtgtgaagaatgtgactacaaaactccttggaaatatttattaaaacaacatatgcgaattcatacaggtgatgaattcaagtgtaaaaattgtgactacaaaacttctaggaaacaattattaaaagaacatatgagaattcatacaggtgatgaattcaagtgtgaagaatgtgactacaaaactctttggaaatatttattaaaacaacatatgagaattcatgcAGGCGAAGAATTCAAGTGTGAGAATTGTAACTACAAAACTATTATGAAACAAGATCTTAacacacatataaaaattcatacaggtgataaattgaagtgtaaagaatgtgactacaaaacttttaggaaacaattattaaaagaccatatgagaattcatacaggtgataagttcaagtgtaaagaatgtgactatgaAACTCCTTGGaaatattcattaaaagaaCATActagaattcatacaggtgatgaattcaAGTGTAACAATTGTGACTACAAAACTATTAAGAAACAAGATCTTAacacacatataaaaattcacacaggtgataaattgaagtgtaaggaatgtgactacaaaactcctaggaagcaattattaaaagaacatatgagaattcatacaggtgacgaattgaagtgtaaagaatgtgactacaaaactcctaggaaacaatcattaaaacaacatatgcgaattcatacaggtgacgaattgaagtgtaaagaatgtgactacaaaactcctaGGAAACAATCATTAAAACAACATATGCGAATTCATGCAGGTGATGAATTGaagtgtaaacaatgtgattaCAATACCCcttggaaaaatttattaaaacaacataTGAGAGttcatacagatgatgaattaaagtgtgaagaatgtgactacaaaactccttggaaacatttattgaaacaacatatgaaaattcatacaggtgatgaattcaAATGTAAGAATTGTGACTACAAAACTATTAAGAAACAAGATCTTAacacacatataaaaattcacacaggtgataaattgaagtgtaaagaatgtgactacaaaactcctaggaagcaattattaaaagaacatatgagaattcatacaggtgataaattgaagtgtaaagaatgtgagtaCAAAACTCAtaggaaatatttattaaaagaacatatgagaattcatacaggtgatgaattcaAATGTAAGAATTGTGACTACAAAACTATTAAGAAACAAGATCTTAacacacatataaaaattcacacaggtgataaattgaagtgtaaagaatgtgactacaaaactcctaGGAAACAATCATTAAAACAACATATGCGAATTCATGCAGGTGACgaattgaagtgtaaagaatgtgactacaaaactcctaGGAAACAATCATTAAAACAACATATGCGAATTCATGCAGGTGACGAATTGaagtgtaaacaatgtgattaCAATACCCcttggaaaaatttattaaaacaacataTGAGAGttcatacagatgatgaattaaagtgtgaagaatgtgactacaaaactccttggaaacatttattgaaacaacatatgaaaattcatacaggtgatgaattcaAATGTAAGAATTGTGACTACACAACTCCTAGGAAACATGATCTTTacaaacatgtaaaaattcatacaggtgaaaaattaaagtgtaaagaatgtgagtaCAAAACTCAtaggaaatatttattaaaagaacatatgagaattcatacagATTATGggaataaagaatttaaatcgGAGCCAGTAGATAttgaagaatcttttaaatgcaaGGAAGAAGATAACCTTGCAGAGCAGATGGATATATATGCTGATCGTGGACAGCAATATACTTCTAATGATTGCAACTTAAGAACAACAGAAACGGAATGTCCAATAAAACAACTgaaaagtactaaaaatttgtgtaaagaaGAATGTTCCATGAATGATCATTTAAGAATTAATCATGGAGAAGAtagtaaatgtaatattttgacaCCTAAAATTATCTCTGTAACACAACAATTGCAAACTGTCAAAAGTggtgattattatatttgtaatgaacgtgattttaaaacacaaagGAAATGGAATCTAAAAGATCACATGAACAATCATataggtaatgaatataagtgtcaaGAACATGACTATAAAACAGCGTGGAAAGCTAATGTTAACAAGCATATGActgatgaatttaagtgtaacgaatgtgactacaaaactcttcggaaaaaattattaaaacgacATATGATACTTCATACAGGTATAAAATTCAAGtgtaagaaatgtgattataaaactcaTAGGAAATATAAACTTAACacgcatatgaaaattcatacagataaCAAATTGAAGTGTGAAGAATGCGACTATAAAActccttgtaaatatttattaaaaaaacatatgaaacttcatacaggtgatgtATTGaactgtaaggaatgtgattataaaaccgtGCGAGTACAAGATCTTAATAGACATATGGAAATTCACACAGGTAATGAACTacagtgtaatgaatgtgactacaaaactcttcggaaacaattatttaaacgaCATATGATGCTTCACACAGGTACAAAATTCAAGtgtaagaaatgtgattataaaactcaTAGGAAATATAAACTTAacacacatatgaaaattcatacaggcaaCGAATTGAAATGTAAGAAATGCGACTATAAAActccttgtaaatatttattaaaaaaacatatgaaacttcatacaggtgatgtATTCAAGtgtaagaaatgtgattataaaactcaTAGGAAATATAAACTTAACacgcatatgaaaattcatacagataaCAAATTGAAGTGTGAAGAATGCGACTATAAAActccttgtaaatatttattaaaaaaacatatgaGACTTCATACAGGTGATTTATTGaactgtaaggaatgtgattataaaaccgtGCGAGTACAAGATCTTAAAAGACATATGGAAGTTCACACAGGTAATGAATtaaagtgtaatgaatgtgactacaaaactcttcggaaacaattatttaaacgaCATATGATACTTCATACAGGTACAAAATTCAAGtgtaagaaatgtgattataaaactcaTAGGAAACATAATCTTAACACGCATATGAAAAtccatacaggtaatgaattgaagtgtgaagaatgtgaatACAAAACTACTAAGAAACATGTATTAAAAGAACATATAAGAATTCATACAGTCGAtaaattgaagtgtaaagaatgtgactacaaaactcttAGGAAATGTAATCTTAacacacatatgaaaattcatacaggtaatgaattgaaatgtaaagaatgtggctACAAAAccccttgtaaatatttattaaaaaaacatatattaCTTCATACAGGTGAACTATTGAactgtaaggaatgtaattataaaaccgTACGAATACAAGATCTTAAAAGACATTTGGAAATTCACACAGGTAATGAATtaaagtgtaatgaatgtgccTACATAACTTGTAGGAAAGATTTGTTAAAACAACATATGAGAGTTCATACAGGTGTTGTATTGaactgtaaggaatgtgactataaaactatGCGAAAACATGATCTTAAAAGACATATGCTAATTCACACAGGTAATGAATtaaagtgtaatgaatgtgactacaaaacttgTAGGAAGGACTTCTTAAaacaacatatgaaaattcacacaggtgatcaattgaagtgtgaagaatgtgaatacaaaactactaagaaacatctattaaaacaacatatgagaattcatacaggtgatgaattcaagtgtaagaaatgtgactacaaaactgtTAGCAAACATAATCTTAacacacatataaaaattcatacaggtgataaattgTAG
Protein Sequence
MDYGNTEVKLEPVNIEDYFKCNEEDNLSEHMHLSAHPLQQYTCNDCNFRTTENDCLIKHLQSVIIVLGQPYTNYRNKSWIYIMDVDYNESCPIKSEVTLTETFSFCEEYGGYGNKELKSEPLDIKEYVKCKEEDNLAEHMEVSAEPVQQYTCNDSNFKTTEKDCLIKHLKSTKNIQDLCKECNFKTLLEWNEDRHGVDSKCNFKTPQIISVTQQLKTVENGEHYICNQCGFKTLSKHKLKVHINNHIGNKYKYKECDFKTEWKSNLNNHTKIHSGDKLKCKECDYKTPNKHRLKQHMRIHTGDEWKCEECDYKTPWKYLLKQHMRIHTGDEFKCKNCDYKTSRKQLLKEHMRIHTGDEFKCEECDYKTLWKYLLKQHMRIHAGEEFKCENCNYKTIMKQDLNTHIKIHTGDKLKCKECDYKTFRKQLLKDHMRIHTGDKFKCKECDYETPWKYSLKEHTRIHTGDEFKCNNCDYKTIKKQDLNTHIKIHTGDKLKCKECDYKTPRKQLLKEHMRIHTGDELKCKECDYKTPRKQSLKQHMRIHTGDELKCKECDYKTPRKQSLKQHMRIHAGDELKCKQCDYNTPWKNLLKQHMRVHTDDELKCEECDYKTPWKHLLKQHMKIHTGDEFKCKNCDYKTIKKQDLNTHIKIHTGDKLKCKECDYKTPRKQLLKEHMRIHTGDKLKCKECEYKTHRKYLLKEHMRIHTGDEFKCKNCDYKTIKKQDLNTHIKIHTGDKLKCKECDYKTPRKQSLKQHMRIHAGDELKCKECDYKTPRKQSLKQHMRIHAGDELKCKQCDYNTPWKNLLKQHMRVHTDDELKCEECDYKTPWKHLLKQHMKIHTGDEFKCKNCDYTTPRKHDLYKHVKIHTGEKLKCKECEYKTHRKYLLKEHMRIHTDYGNKEFKSEPVDIEESFKCKEEDNLAEQMDIYADRGQQYTSNDCNLRTTETECPIKQLKSTKNLCKEECSMNDHLRINHGEDSKCNILTPKIISVTQQLQTVKSGDYYICNERDFKTQRKWNLKDHMNNHIGNEYKCQEHDYKTAWKANVNKHMTDEFKCNECDYKTLRKKLLKRHMILHTGIKFKCKKCDYKTHRKYKLNTHMKIHTDNKLKCEECDYKTPCKYLLKKHMKLHTGDVLNCKECDYKTVRVQDLNRHMEIHTGNELQCNECDYKTLRKQLFKRHMMLHTGTKFKCKKCDYKTHRKYKLNTHMKIHTGNELKCKKCDYKTPCKYLLKKHMKLHTGDVFKCKKCDYKTHRKYKLNTHMKIHTDNKLKCEECDYKTPCKYLLKKHMRLHTGDLLNCKECDYKTVRVQDLKRHMEVHTGNELKCNECDYKTLRKQLFKRHMILHTGTKFKCKKCDYKTHRKHNLNTHMKIHTGNELKCEECEYKTTKKHVLKEHIRIHTVDKLKCKECDYKTLRKCNLNTHMKIHTGNELKCKECGYKTPCKYLLKKHILLHTGELLNCKECNYKTVRIQDLKRHLEIHTGNELKCNECAYITCRKDLLKQHMRVHTGVVLNCKECDYKTMRKHDLKRHMLIHTGNELKCNECDYKTCRKDFLKQHMKIHTGDQLKCEECEYKTTKKHLLKQHMRIHTGDEFKCKKCDYKTVSKHNLNTHIKIHTGDKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-