Lyun019280.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lamprigera yunnana
Gene Symbol
-
Assembly
GCA_013368075.1
Location
JABVZV010002652.1:39538-53374[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 51 1.1 15 6.4 1.4 1 23 91 113 91 113 0.97
2 51 0.0043 0.061 13.9 2.5 1 23 145 167 145 167 0.99
3 51 4.8e-05 0.00068 20.1 1.7 1 23 172 194 172 194 0.98
4 51 0.0011 0.015 15.8 2.1 1 23 199 221 199 221 0.98
5 51 0.037 0.52 11.0 1.0 1 23 226 248 226 248 0.99
6 51 0.0002 0.0028 18.1 0.9 1 23 253 275 253 275 0.99
7 51 0.037 0.52 11.0 1.0 1 23 280 302 280 302 0.99
8 51 0.12 1.7 9.3 2.1 1 23 361 383 361 383 0.99
9 51 0.0034 0.047 14.3 2.9 1 23 388 410 388 410 0.99
10 51 4.8e-05 0.00068 20.1 1.7 1 23 415 437 415 437 0.98
11 51 0.00072 0.01 16.4 2.1 1 23 442 464 442 464 0.98
12 51 0.037 0.52 11.0 1.0 1 23 469 491 469 491 0.99
13 51 0.02 0.29 11.8 0.8 1 23 496 518 496 518 0.99
14 51 0.0034 0.047 14.3 2.9 1 23 523 545 523 545 0.99
15 51 4.8e-05 0.00068 20.1 1.7 1 23 550 572 550 572 0.98
16 51 0.022 0.31 11.7 1.1 1 23 577 599 577 599 0.98
17 51 0.00072 0.01 16.4 2.1 1 23 604 626 604 626 0.98
18 51 0.034 0.48 11.1 1.4 1 23 631 653 631 653 0.99
19 51 0.0034 0.047 14.3 2.9 1 23 658 680 658 680 0.99
20 51 4.8e-05 0.00068 20.1 1.7 1 23 685 707 685 707 0.98
21 51 0.00072 0.01 16.4 2.1 1 23 712 734 712 734 0.98
22 51 0.037 0.52 11.0 1.0 1 23 739 761 739 761 0.99
23 51 0.0002 0.0028 18.1 0.9 1 23 766 788 766 788 0.99
24 51 0.037 0.52 11.0 1.0 1 23 793 815 793 815 0.99
25 51 0.21 2.9 8.6 0.4 1 23 820 842 820 842 0.98
26 51 0.0034 0.047 14.3 2.9 1 23 874 896 874 896 0.99
27 51 4.8e-05 0.00068 20.1 1.7 1 23 901 923 901 923 0.98
28 51 0.00072 0.01 16.4 2.1 1 23 928 950 928 950 0.98
29 51 0.02 0.29 11.8 0.8 1 23 955 977 955 977 0.99
30 51 0.034 0.48 11.1 0.8 1 23 982 1004 982 1004 0.98
31 51 0.46 6.5 7.5 0.4 1 23 1009 1031 1009 1031 0.97
32 51 0.39 5.6 7.8 0.9 2 23 1037 1058 1036 1058 0.97
33 51 0.09 1.3 9.8 0.1 1 21 1126 1146 1126 1147 0.95
34 51 4.2e-05 0.00059 20.3 2.4 1 23 1232 1254 1232 1254 0.99
35 51 0.046 0.65 10.7 0.4 1 23 1259 1281 1259 1281 0.98
36 51 0.002 0.029 14.9 3.2 1 23 1286 1308 1286 1308 0.99
37 51 9.2e-05 0.0013 19.2 1.0 1 23 1313 1335 1313 1335 0.99
38 51 0.093 1.3 9.7 0.9 1 23 1340 1362 1340 1362 0.98
39 51 0.052 0.73 10.5 1.4 1 23 1367 1389 1367 1389 0.98
40 51 7.1 1e+02 3.8 1.2 1 23 1394 1416 1394 1416 0.95
41 51 0.052 0.74 10.5 4.4 1 23 1421 1443 1421 1443 0.99
42 51 0.04 0.57 10.9 0.9 1 23 1448 1470 1448 1470 0.98
43 51 0.03 0.42 11.3 0.2 1 23 1475 1497 1475 1497 0.99
44 51 0.018 0.26 12.0 1.3 1 23 1502 1524 1502 1524 0.99
45 51 0.0044 0.063 13.9 1.6 1 23 1529 1551 1529 1551 0.99
46 51 1.5 21 6.0 3.0 1 23 1556 1578 1556 1578 0.98
47 51 3.8 54 4.6 2.9 1 23 1583 1605 1583 1605 0.95
48 51 0.0084 0.12 13.0 1.3 1 23 1610 1632 1610 1632 0.99
49 51 0.043 0.6 10.8 1.9 1 23 1637 1659 1637 1659 0.99
50 51 0.2 2.8 8.7 1.5 1 23 1664 1686 1664 1686 0.97
51 51 0.12 1.6 9.4 0.9 1 23 1691 1713 1691 1713 0.98

Sequence Information

Coding Sequence
atGGATGTTGATTATAATGAAGTTTAtccaataaaatctgaagtgattaaaaaggaaacgttttccttttgtgaaaaatttgacGATTATGAGAATGAAGAATTGAAAACGGAGCTAGTAGATTTTGAACATTCTGTTAAATGCGAAGAAGATAATATTGTGGAGCTCACCGATATATGTGGTATACCTGTGCATCATTACATATGTAATGAGTCTAATTTTGTTACAACAGAGAAaatagaacatttgaaaattaccaaaaatgttcaatatttttgtaaggaatgtaattataaaacacaatggaaacagaatctaaaagTGCATGTAAATATTCATAGTGATAATgaacataagtgtaaagaatgtgactataaaacgtCTTGGAAACAGGGCCGAAAGGAACAGGTTAaagttcatactggtgatgGATATACATGTAagaaatgcaattataaaacaccacTAAAACCGtatctaaagaaacatatgaaaattcatagtgatgatgaatataactgtagtgaatgtgactataaaacggtgAGAAAAGATACTCTAAAgagacatatgaaaattcatacaggttatAAACATAAGTGCagtgaatgtgactataaaacagcgagaaaagatagtctaaaggaacatgtgaaaattcatactggcgaagtatataagtgtaaggaatgtgattataaaacaccgtgGAGACAAGCTCTAAAGaaacatcttaaaattcatactggtgatgaatataagtgtagtgaatgtgactataaaacagcgagaaaagatagtctaaaggaacatgtgaaaattcatactggcgaagtatataagtgtaaggaatgtgattataaaacaccgtgGAGACAAGCTCTAAAGaaacatcttaaaattcatactggtgatgaatataagtgtatgaAATGTGATTGTAAAACACAATGGAAACAGAATTTAAAGGAGCATGTAAATATTCATAGTGATAATgaacataagtgtaaagagtgtgactaTAATATGTCTTGGAAACAGGGTCGAAAGGAACAGATTAaagttcatactggtgatgtatataagtgtaagaaatgcaattataaaacaccGTGGAGACAAGCTCTAAAGaaacatcttaaaattcatactggcgaagtatataagtgtaagaaatgcaattataaaacaccacTAAAACCAtatctaaagaaacatatgaaaattcatagtgatgatgaatataactgtagtgaatgtgactataaaacggtgAGAAAAGATACTCTAAAgagacatatgaaaattcatacaggttatAAACATAAGTGCaacgaatgtgactataaaacagcgagaaaagatagtctaaaggaacatgtgaaaattcatactggcgaagtatataagtgtaaggaatgtgattataaaacaccgtgGAGACAAGCTCTAAAGaaacatcttaaaattcatactggcgaagtatataagtgtaaggaatgtgattataaaacgccgTGGAGACAGGCTCTaaagaaacatattaaaattcatactggcgaagtatataagtgtaagaaatgcaattataaaacaccacTAAAACCAtatctaaagaaacatatgaaaattcatagtaATGATGGATATAACTGTagtgaatgtgactataaaacggtgAGGAAGGATACTCTAAAgagacatatgaaaattcatactggcgaaATATATGAGTGTAAgaaatgcgattataaaacgcCGTGGAGACAGGCTCTAAagaaacatatgaaaattcatacaggttatAAACATAAGTGCaacgaatgtgactataaaacagcgagaaaagatagtctaaaggaacatgtgaaaattcatactggcgaagtatataagtgtaagaaatgcgattataaaacgcCGTGGAGACAGGCTCTaaagaaacatattaaaattcatactggcgaagtatataagtgtaagaaatgcaattataaaacaccacTAAAACCAtatctaaagaaacatatgaaaattcatagtaATGATGGATATAACTGTagtgaatgtgactataaaacggtgAGGAAGGATACTCTAAAgagacatatgaaaattcatacaggttatAAACATAAGTGCaacgaatgtgactataaaacagcgagaaaagatagtctaaaggaacatgtgaaaattcatactggcgaagtatataagtgtaaggaatgtgattataaaacaccgtgGAGACAAGCTCTAAAGaaacatcttaaaattcatactggtgatgaatataagtgtagtgaatgtgactataaaacagcgagaaaagatagtctaaaggaacatgtgaaaattcatactggcgaagtatataagtgtaaggaatgtgattataaaacaccgtgGAGACAAGCTCTAAAGaaacatcttaaaattcatactggtgatgagtataagtgtaaggaatgtgattataaaacgccgTGGAGACAGgctttaaaggaacatgttaaaattcatactggtgatgagtataagtgtaaagagtgtgactaTAATATGTCTTGGAAACAGGGTCGAAAGGAACAGATTAaagttcatactggtgatgtatataagtgtaagaaatgcaattataaaacaccacTAAAACCAtatctaaagaaacatatgaaaattcatagtaATGATGGATATAACTGTagtgaatgtgactataaaacggtgAGGAAGGATACTCTAAAgagacatatgaaaattcatacaggttatAAACATAAGTGCaacgaatgtgactataaaacagcgagaaaagatagtctaaaggaacatgtgaaaatacATACTGGTGAAGTatacaagtgtaaggaatgtgattataaaacgccgTGGAGACAGGCTCTaaagaaacatattaaaattcatactggtgatgagtataagtgtaaggaatgtgattataaaacaccatggaaacaaaatctaaaggagcatgtgaaaattcatactggcgaaATATATGAGTGTAAgaaatgcgattataaaacgcCGTGGAGACAGgctttaaaggaacatgttaaaattcatactagtGTTGAGAATAAGTGTAagcaatgtgattataaaacaccatggaaacaaaatctaaaggtgcatgtaaaaattcattcgGGCAAAGAATATAACTGtattgaatgtgattataaaacactgtggaaacaGACCCTTATTGATCATGTTAAAAGccatactgGTTACAAGAATAATGAATTGAAAACTGAGCCGGaagatatagaaaaatatttgaaatgcaAAGAAGAGGATAATCTTGTGGAGCTCACCAATACACGTGCTGTGGTCGTAaatcaatatatttgtaatgaatgtaatttcaTTACAACGGAGAAAGATTCTTTAATACAACACttgaacgttattaaaaatattcaatatttttgtaaagaatgtaattttagaaCTTCATCTGGATGTTCGATAAAAGAGCATTTCAAATTTCATAACAGGGTTTTTTGTGGATGTattacaaagaaatgtaattttaagaagccacgaatttttgttttagcaCCACAAGGTGATATCAAATGTAGTTGTAAGGAATGTGGTTTTAAAATACTACTGAAAGGTGGACTAAtagaacatgtgaaaattcatacagatgatgagtataagtgtacggaatgtgattataaaacatcacggAAACGCAATCTAAAGgtgcatttaaaaattcataccggtgatgaatataaatgtagagATTGTGATTATAGAACAGTATGGAGACAGAATCTAATAACACATATGATAATTCATACTGgttatgaatataagtgtaaggaatgtgattataaaacacgcttcaaacagaaactaaaggcccatttaaaaatccatactggtgatgaatataagtgtaaagaatgtgattataaaactgtgcagAAGGATCTTCTAAAACAACATATTCAAAtccacactggtgatgaatttaagtgtcaggaatgtgattttaaaacaccatggaagtcGACTCTACAGAATCATGTAaagattcatactggtgatgaatataagtgtaaggaatgtgattataaaacacgatGGAAACTGagtctaaaggcacatttaaaaatccatactggtgatgaatataagtgtatggaatgtgattataaaacacaatggaaacCGAGTCTAAAAAcacattcaaaaattcatactgatgataactataagtgtaaggaatgtgattataaaacacgatGGAAAAagcatctaaaggaacatttaaaaatccatactggcgatgaatttaagtgtacggaatgtgattataagacacCATGGAAACAGTCTCTAAAGAGACATTTATTAATTCATAATGGTGATATATATAAGTGTAGcgattgtgattataaagcaCGATGGAAACCGAATCTAgaggcacatttaaaaatccatactggtgatgaatataagtgtatggaatgtgattataaaacagtgaggaaatatattttaaaggatcatatgaaaattcatactggtgatgaatataagtgtacggaatgtgattataaaacagtgaggaaatatattttaaaggatcatatgaaaattcatactggtgatgaatataagtgtacggaatgtgattataaaacagtgtggaaaaagtgtttaaagggacatttaaaaatacattctgGTGACGAATTTAAGTGTAaggattgtgattataaaactcaATGGAAACTGTGTCTaaatgcacatttaaaaattcatactggtgataattataagtgtaaggaatgtgattacaaaacacgaTGGAAAAAGGATCTCaatgcacatttaaaaatccatactggtgatgaatataaatgtaaggaatgtgattataaaacacaatggaaatCGAGTCTAAacacacatttaaaaattcatacaggtgataagtataactgtaaagaatgtgattataaaacacgatGGAAAAAGGATCTAAATGCACACTTTaaaatccatacaggtgatgaatatagatgtaaggaatgtgattataaaacacgatGGGAACCGAGTCTaaagacacatttaaaaatacatactaGTTTAGcacaagtgtaa
Protein Sequence
MDVDYNEVYPIKSEVIKKETFSFCEKFDDYENEELKTELVDFEHSVKCEEDNIVELTDICGIPVHHYICNESNFVTTEKIEHLKITKNVQYFCKECNYKTQWKQNLKVHVNIHSDNEHKCKECDYKTSWKQGRKEQVKVHTGDGYTCKKCNYKTPLKPYLKKHMKIHSDDEYNCSECDYKTVRKDTLKRHMKIHTGYKHKCSECDYKTARKDSLKEHVKIHTGEVYKCKECDYKTPWRQALKKHLKIHTGDEYKCSECDYKTARKDSLKEHVKIHTGEVYKCKECDYKTPWRQALKKHLKIHTGDEYKCMKCDCKTQWKQNLKEHVNIHSDNEHKCKECDYNMSWKQGRKEQIKVHTGDVYKCKKCNYKTPWRQALKKHLKIHTGEVYKCKKCNYKTPLKPYLKKHMKIHSDDEYNCSECDYKTVRKDTLKRHMKIHTGYKHKCNECDYKTARKDSLKEHVKIHTGEVYKCKECDYKTPWRQALKKHLKIHTGEVYKCKECDYKTPWRQALKKHIKIHTGEVYKCKKCNYKTPLKPYLKKHMKIHSNDGYNCSECDYKTVRKDTLKRHMKIHTGEIYECKKCDYKTPWRQALKKHMKIHTGYKHKCNECDYKTARKDSLKEHVKIHTGEVYKCKKCDYKTPWRQALKKHIKIHTGEVYKCKKCNYKTPLKPYLKKHMKIHSNDGYNCSECDYKTVRKDTLKRHMKIHTGYKHKCNECDYKTARKDSLKEHVKIHTGEVYKCKECDYKTPWRQALKKHLKIHTGDEYKCSECDYKTARKDSLKEHVKIHTGEVYKCKECDYKTPWRQALKKHLKIHTGDEYKCKECDYKTPWRQALKEHVKIHTGDEYKCKECDYNMSWKQGRKEQIKVHTGDVYKCKKCNYKTPLKPYLKKHMKIHSNDGYNCSECDYKTVRKDTLKRHMKIHTGYKHKCNECDYKTARKDSLKEHVKIHTGEVYKCKECDYKTPWRQALKKHIKIHTGDEYKCKECDYKTPWKQNLKEHVKIHTGEIYECKKCDYKTPWRQALKEHVKIHTSVENKCKQCDYKTPWKQNLKVHVKIHSGKEYNCIECDYKTLWKQTLIDHVKSHTGYKNNELKTEPEDIEKYLKCKEEDNLVELTNTRAVVVNQYICNECNFITTEKDSLIQHLNVIKNIQYFCKECNFRTSSGCSIKEHFKFHNRVFCGCITKKCNFKKPRIFVLAPQGDIKCSCKECGFKILLKGGLIEHVKIHTDDEYKCTECDYKTSRKRNLKVHLKIHTGDEYKCRDCDYRTVWRQNLITHMIIHTGYEYKCKECDYKTRFKQKLKAHLKIHTGDEYKCKECDYKTVQKDLLKQHIQIHTGDEFKCQECDFKTPWKSTLQNHVKIHTGDEYKCKECDYKTRWKLSLKAHLKIHTGDEYKCMECDYKTQWKPSLKTHSKIHTDDNYKCKECDYKTRWKKHLKEHLKIHTGDEFKCTECDYKTPWKQSLKRHLLIHNGDIYKCSDCDYKARWKPNLEAHLKIHTGDEYKCMECDYKTVRKYILKDHMKIHTGDEYKCTECDYKTVRKYILKDHMKIHTGDEYKCTECDYKTVWKKCLKGHLKIHSGDEFKCKDCDYKTQWKLCLNAHLKIHTGDNYKCKECDYKTRWKKDLNAHLKIHTGDEYKCKECDYKTQWKSSLNTHLKIHTGDKYNCKECDYKTRWKKDLNAHFKIHTGDEYRCKECDYKTRWEPSLKTHLKIHTSLAQV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-