Lyun011468.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lamprigera yunnana
Gene Symbol
-
Assembly
GCA_013368075.1
Location
JABVZV010001931.1:2209120-2251897[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 48 0.023 0.32 11.7 1.4 1 23 75 97 75 97 0.98
2 48 0.0049 0.069 13.7 3.6 1 23 102 124 102 124 0.99
3 48 0.00093 0.013 16.0 1.1 1 23 129 151 129 151 0.98
4 48 0.00085 0.012 16.1 1.6 1 23 156 178 156 178 0.99
5 48 0.00059 0.0084 16.6 1.7 1 23 183 205 183 205 0.99
6 48 5.4 77 4.2 0.7 1 23 210 232 210 232 0.96
7 48 0.00066 0.0093 16.5 1.3 1 23 237 259 237 259 0.99
8 48 0.01 0.14 12.8 0.8 1 23 264 286 264 286 0.99
9 48 0.64 9.1 7.1 1.0 1 23 291 313 291 313 0.97
10 48 0.00023 0.0033 17.9 2.1 1 23 318 340 318 340 0.99
11 48 0.021 0.29 11.8 1.3 1 23 345 367 345 367 0.99
12 48 0.0022 0.032 14.8 1.1 1 23 372 394 372 394 0.98
13 48 0.00019 0.0026 18.2 1.6 1 23 399 421 399 421 0.98
14 48 0.96 14 6.5 5.2 1 23 426 448 426 448 0.98
15 48 0.44 6.2 7.6 0.7 1 23 453 475 453 475 0.97
16 48 0.41 5.8 7.7 1.1 1 23 480 502 480 502 0.98
17 48 0.0024 0.034 14.7 1.9 1 23 507 529 507 529 0.99
18 48 0.0049 0.069 13.8 2.5 1 23 534 556 534 556 0.99
19 48 0.0011 0.016 15.8 1.7 1 23 1124 1146 1124 1146 0.99
20 48 0.0011 0.016 15.8 1.7 1 23 1151 1173 1151 1173 0.99
21 48 0.0011 0.016 15.8 1.7 1 23 1178 1200 1178 1200 0.99
22 48 0.0011 0.016 15.8 1.7 1 23 1205 1227 1205 1227 0.99
23 48 0.0011 0.016 15.8 1.7 1 23 1232 1254 1232 1254 0.99
24 48 0.0011 0.016 15.8 1.7 1 23 1259 1281 1259 1281 0.99
25 48 0.0011 0.016 15.8 1.7 1 23 1286 1308 1286 1308 0.99
26 48 0.0011 0.016 15.8 1.7 1 23 1313 1335 1313 1335 0.99
27 48 0.0011 0.016 15.8 1.7 1 23 1340 1362 1340 1362 0.99
28 48 0.0011 0.016 15.8 1.7 1 23 1367 1389 1367 1389 0.99
29 48 0.0011 0.016 15.8 1.7 1 23 1394 1416 1394 1416 0.99
30 48 0.0011 0.016 15.8 1.7 1 23 1421 1443 1421 1443 0.99
31 48 0.0011 0.016 15.8 1.7 1 23 1448 1470 1448 1470 0.99
32 48 0.058 0.83 10.4 1.7 1 23 1475 1497 1475 1497 0.98
33 48 0.0011 0.016 15.8 1.7 1 23 1502 1524 1502 1524 0.99
34 48 0.058 0.83 10.4 1.7 1 23 1529 1551 1529 1551 0.98
35 48 0.3 4.3 8.1 2.8 1 23 1556 1578 1556 1578 0.98
36 48 0.00041 0.0058 17.1 0.9 1 23 1583 1605 1583 1605 0.98
37 48 0.0035 0.049 14.2 0.9 1 23 1610 1632 1610 1632 0.98
38 48 0.0017 0.024 15.2 1.9 1 23 1637 1659 1637 1659 0.98
39 48 0.0048 0.067 13.8 1.9 1 23 1664 1686 1664 1686 0.98
40 48 0.0028 0.04 14.5 2.0 1 23 1691 1713 1691 1713 0.99
41 48 0.061 0.87 10.3 1.7 1 23 1718 1740 1718 1740 0.98
42 48 0.5 7 7.4 4.3 1 23 1745 1767 1745 1767 0.98
43 48 0.058 0.83 10.4 1.7 1 23 1772 1794 1772 1794 0.98
44 48 0.0011 0.016 15.8 1.7 1 23 1799 1821 1799 1821 0.99
45 48 0.36 5.1 7.9 2.0 1 23 1826 1848 1826 1848 0.98
46 48 0.00012 0.0017 18.8 0.7 1 23 1853 1875 1853 1875 0.98
47 48 1.1 16 6.3 0.7 1 23 1880 1902 1880 1902 0.96
48 48 0.011 0.16 12.6 0.8 1 23 1907 1929 1907 1929 0.98

Sequence Information

Coding Sequence
atggatgttgattctattgaaaattgtgcaataaaatctgaagtgattttaacagaaacgtttTCGTTTTGTGGACAATATGATTATGGGGATAAAGAACTAAAACCAGAGCCAGTAGATTACAAAGAATCTTTTGAATGTAAGGAAGAAGATATTTCTGTAGAGCAGACAGATGTGCACGCTGCTCCGATGGTacaattttcttgtaatgagcGTGACACATACacttgtaatgaatgtaattattccACATTAATCAAAAGTTATCTAAGAagacatattaaaattcataaagatgctgaatataagtgtaatgaatgcgattataaaacagtgcgaaaaaattgtctaaatcaacatgttaaaattcatacaggtgatgaatataaatgtaaagaatgtgactataaaacagtacgaaaagAAAGTCTAAAgggacatgtcaaaattcatacaggtgacgaatataagtgtaaagagtgtgattataaaacagtgcgaaaaaattaCCTGcaggaacatgttaaaattcatacaggtgatgaatataagtgtaaagattgtgattataaaacagtgcgaaaaaactatctacaggaacatgtcaaaattcatacaggtgacgaatacaaatgtatagaatgtgattttaaaacagcatggcaaagtagtctaaaggaacatgtcaaaaaacataaaggtgacgaatataaatgtaaagaatgtgactataaaactgtgCGAAAAGATCGTCTCAAggcacatgtcaaaattcatacagatgatgaatataaatgtgaagaatgtgattacaaaacagtgtggcaaaaaTCCCTaaacaaacatataaaaattcatacaggtgatgaatataagtgtaaggaatgtgattataaaacagcatggcaaagACGTCTGAAggagcatgtcaaaattcatacaggtgatgaatataagtgtaaagaatgtaattatacaacAGTACGAAAAAACTACCTAAaagaacatatcaaaattcatacaggtgatgaatataagtgtaaagaatgtgattataaaacagcatggcaaagtagtctgaaggaacatgttaaaaaacatacaggtgatgaatttaagtgtaaagaatgtgactataaaacagtgcgagaAAATtccctaaaggaacatgtcaaaattcatacaggtgctgaatatatgtgtaaagaatgtgattataaaacagtgcggaaaaattccctaaataaacatattaaaattcattcgggtgatgaatataagtgtaaagattgtgactataaaacagtgtggcaacaTTGTCTAaagaatcatgtcaaaattcatacaggccatgaatataagtgtaaagaatgtgattataaaacggtgtggaaaaGTTCTGTAAAGGATCATGCCAAAGTTCATACAGGTTACAAATATGAGtgcaatgaatgtgattataaaaccgcATGGCAatgtagtctaaaggaacatgtgaaagtCCATAGAgatgacaaatataagtgtaaagaatgtgactataaaacggtgcgaagaaatcgtctaaaggaacacattaaaattcatacaggtgatgaatataaatgtaaagaatgtgactataaagcAGTGCGAAAAAATTGTCTacaggaacacatcaaaattcatacagATTCCCAAAGTTTAGgtaacaaagaaattaatatttctgaCATAACTTCGagttctacaaataaacctgcaaaaAACAAGTATAAGACGGATACAAATCAAAAGATATTTCCACCTACGGTTTTAAGCTCAGATGAAGGAGTGATGCAAGTAAATAAGaaaCCCTTTAATGTAAATTGTGATGACGTTGAGGATATGATTGTTCCCTCATCTATGTGTGGTGATGATTCCTATTTAGACGCCGGCTTTGTTCCTACAGTAGAAGAGATGCATTCGTCAGATGAGGAATCTTCTTCGGACGAGTCAGGATTTCTGACTACAAGAAGAAGATTTCCAGCGTTACCACTAGCGATTTCCGGTACTTCAGAACAAATAGAAACAGATGAAGAAAATGAAACTTCGTCTTCTGATTGTGATTCATCAGACATAGAAGTTAACATCATCCAGACTAATGAATGGATCCCTATTGATGAGATATACCAAGATACTGAAACGATGTGGAGTGATGAGTTACTTGTAAATGATaCAAGAATGTCATCTACTTGCTGCTTTATAATAGAGGATCAATCCTGTGGACCAATTTCGATTCCCAAAGATTCAAATCTTCAAGCTATTAATGAAGAATTTGAAGATGCACACAAaatggatgaggaaattgaataCACACATTGCGAAAACAGACAAAAGCAAATCCGCGAGCgtgattattgttttttctgtaAAAGTAGTGTCTTAAACTATGCAAGACATCTTAAGAGAAATCATGCATCTGAAATTGaagtgcaaaaaatattatCCCTACCTGcaaaatccaaaaatagaaaatacttaCTTAACTCTTTGAGAAAAAAGGGGAATTATATACATCACTTTATGGGTACTACTAAGCCGGTCAGAAAGACAGTTTTAAATAGCACTAAGTTAATGCCATGTCATTTTTGCATGGGGTTTTATGCATCGAAACAATTGTGGCGTCATAGAAACTCTTGTGCGGAAAATCGTACTAAAACAACTGGCACGTTGAGTGATAGTCAAAATTATCTCTTAAAAGATTTGCTGGTTAACACAAAATTAAGAGAGACCGTGTTCCCTAAGATGAGGGCGGATGATATTTCATTAGTCGCCAAACGGGatattttaatttgtgaatTTGGGTCGCACTACTTAAGACTCCATAGAGACAAACATGTAATTAATGTAACTTCTAGGAAAATGAGAGAATTGGCAAGATTGTTAATCGAAATTAGAAAATTGCATCCgtcaattcaaaatttatttcaagcCCTTCAACCCCAGAATTTTGATTTAATCATTCAAGCAATGAAAATTGTTGCACAGTATGATATTGTACAAGATAAATTTGGATCACGTACATATGCCATGAACATATGCACATCATTGAAAGAGTGTTGTAatattgctattgtttttgCACTTAAGAGAAAATTCTGTTATTCTACTATAAATCCGACTGAGGCTGAATTCAATCTTAAAACAATGGTACATCTATTAGAATccaattggaagtatgaagataaTAAACCAACTATCCCTACTGAATCGAATAACAAGAAGAAACGGGTCCTTATACCATGGACTGAAAATCAAAAGACAATAGTGAAACATTTCTTTAAAGATCATATTGTCAAGAAGGTACCACCAAAAAAGAgagaatATGGGTCATCCACAGgcgatgagtataagtgtaaagaatgtgactataaaacagtgcgacaAGAtcgtctaaagcaacatgtcaaaattcacacaggcgatgagtataagtgtaaagaatgtgactataaaacagtgcgacaAGAtcgtctaaagcaacatgtcaaaattcacacaggcgatgagtataagtgtaaagaatgtgactataaaacagtgcgacaAGAtcgtctaaagcaacatgtcaaaattcacacaggcgatgagtataagtgtaaagaatgtgactataaaacagtgcgacaAGAtcgtctaaagcaacatgtcaaaattcacacaggcgatgagtataagtgtaaagaatgtgactataaaacagtgcgacaAGAtcgtctaaagcaacatgtcaaaattcacacaggcgatgagtataagtgtaaagaatgtgactataaaacagtgcgacaAGAtcgtctaaagcaacatgtcaaaattcacacaggcgatgagtataagtgtaaagaatgtgactataaaacagtgcgacaAGAtcgtctaaagcaacatgtcaaaattcacacaggcgatgagtataagtgtaaagaatgtgactataaaacagtgcgacaAGAtcgtctaaagcaacatgtcaaaattcacacaggcgatgagtataagtgtaaagaatgtgactataaaacagtgcgacaAGAtcgtctaaagcaacatgtcaaaattcacacaggcgatgagtataagtgtaaagaatgtgactataaaacagtgcgacaAGAtcgtctaaagcaacatgtcaaaattcacacaggcgatgagtataagtgtaaagaatgtgactataaaacagtgcgacaAGAtcgtctaaagcaacatgtcaaaattcacacaggcgatgagtataagtgtaaagaatgtgactataaaacagtgcgacaAGAtcgtctaaagcaacatgtcaaaattcacacaggcgatgagtataagtgtaaagaatgtgactataaaacagtgcgacaAGAtcgtctaaagcaacatgtcaaaattcacacaggcgatgagtataagtgtaaagaatgtgattataaaacaaaatggcaaagaagtctaaaggaacatgtcaaaattcacacaggcgatgagtataagtgtaaagaatgtgactataaaacagtgcgacaAGAtcgtctaaagcaacatgtcaaaattcacacaggcgatgagtataagtgtaaagaatgtgattataaaacaaaatggcaaagaagtctaaaggaacatgtcaaaattcacacaggtaatgaatataagtgtaaagaatgtgattataaaacaaaatggcaaggatgtctaaaggaacatgtcaaaattcatgcaggtgtcaaatatgagtgtaaagaatgtgattataaaacagtgcgaaaagattatctaaaggaacatgtcaaaattcatgcaggtgtcaaatatgagtgtaaagaatgtgattataaaacagtatggaaaagtaatctaaagaaacatgtcaaaattcatacaggtgtcaaatatgagtgtaaagaatgtgattataaaacagtgctacaatatcatctaaaggaacatatcaaaatacatacaggtgatgaatatatgtgtaaaaaatgtgactataaaacagtgcgacaAGAtcgtctaaagcaacatgtcaaaattcacacaggcgatgagtataagtgtaaaaaatgcgactataaaacagtgcgacaAGATcgtctaaaagaacatgtcaaaattcatacaggcgatgagtataagtgtaaagaatgtgattataaaacaaaatggcaaagaaGCCTAAAGGATCATGTTAAAATACacacaggtaatgaatataagtgtaaagaatgtgattataaaacaacatggcAAAGatgtctaaagcaacatgtcaaaattcacacaggcgatgagtataagtgtaaagaatgtgattataaaacaaaatggcaaagaagtctaaaggaacatgttaaaattcacacaggtaatgaatataagtgtaaagaatgtgactataaaacagtgcgacaAGAtcgtctaaagcaacatgtcaaaattcatacaggtgttgaatataagtgtgaagaatgtaattataaaacaacatggcaaggatgtctaaaggaacatgtcaaaattcatacaggtgtcaaatatgagtgtaaagaatgtgactataaaacagtgcgaaaagatagtttaaaggaacatgtcagaattcatacaggtgtcaaatatgagtgtaaagaatgtgattataaaacaacatggcAAAGAAGTATAaaagaacatgttaaaattcattcaggtgatgaatataagtgtaaagaatgtgattataaaacagcatggaaaagtaatctaaagatacatgaaaaaattcatgcACGTGTCAaatattag
Protein Sequence
MDVDSIENCAIKSEVILTETFSFCGQYDYGDKELKPEPVDYKESFECKEEDISVEQTDVHAAPMVQFSCNERDTYTCNECNYSTLIKSYLRRHIKIHKDAEYKCNECDYKTVRKNCLNQHVKIHTGDEYKCKECDYKTVRKESLKGHVKIHTGDEYKCKECDYKTVRKNYLQEHVKIHTGDEYKCKDCDYKTVRKNYLQEHVKIHTGDEYKCIECDFKTAWQSSLKEHVKKHKGDEYKCKECDYKTVRKDRLKAHVKIHTDDEYKCEECDYKTVWQKSLNKHIKIHTGDEYKCKECDYKTAWQRRLKEHVKIHTGDEYKCKECNYTTVRKNYLKEHIKIHTGDEYKCKECDYKTAWQSSLKEHVKKHTGDEFKCKECDYKTVRENSLKEHVKIHTGAEYMCKECDYKTVRKNSLNKHIKIHSGDEYKCKDCDYKTVWQHCLKNHVKIHTGHEYKCKECDYKTVWKSSVKDHAKVHTGYKYECNECDYKTAWQCSLKEHVKVHRDDKYKCKECDYKTVRRNRLKEHIKIHTGDEYKCKECDYKAVRKNCLQEHIKIHTDSQSLGNKEINISDITSSSTNKPAKNKYKTDTNQKIFPPTVLSSDEGVMQVNKKPFNVNCDDVEDMIVPSSMCGDDSYLDAGFVPTVEEMHSSDEESSSDESGFLTTRRRFPALPLAISGTSEQIETDEENETSSSDCDSSDIEVNIIQTNEWIPIDEIYQDTETMWSDELLVNDTRMSSTCCFIIEDQSCGPISIPKDSNLQAINEEFEDAHKMDEEIEYTHCENRQKQIRERDYCFFCKSSVLNYARHLKRNHASEIEVQKILSLPAKSKNRKYLLNSLRKKGNYIHHFMGTTKPVRKTVLNSTKLMPCHFCMGFYASKQLWRHRNSCAENRTKTTGTLSDSQNYLLKDLLVNTKLRETVFPKMRADDISLVAKRDILICEFGSHYLRLHRDKHVINVTSRKMRELARLLIEIRKLHPSIQNLFQALQPQNFDLIIQAMKIVAQYDIVQDKFGSRTYAMNICTSLKECCNIAIVFALKRKFCYSTINPTEAEFNLKTMVHLLESNWKYEDNKPTIPTESNNKKKRVLIPWTENQKTIVKHFFKDHIVKKVPPKKREYGSSTGDEYKCKECDYKTVRQDRLKQHVKIHTGDEYKCKECDYKTVRQDRLKQHVKIHTGDEYKCKECDYKTVRQDRLKQHVKIHTGDEYKCKECDYKTVRQDRLKQHVKIHTGDEYKCKECDYKTVRQDRLKQHVKIHTGDEYKCKECDYKTVRQDRLKQHVKIHTGDEYKCKECDYKTVRQDRLKQHVKIHTGDEYKCKECDYKTVRQDRLKQHVKIHTGDEYKCKECDYKTVRQDRLKQHVKIHTGDEYKCKECDYKTVRQDRLKQHVKIHTGDEYKCKECDYKTVRQDRLKQHVKIHTGDEYKCKECDYKTVRQDRLKQHVKIHTGDEYKCKECDYKTVRQDRLKQHVKIHTGDEYKCKECDYKTKWQRSLKEHVKIHTGDEYKCKECDYKTVRQDRLKQHVKIHTGDEYKCKECDYKTKWQRSLKEHVKIHTGNEYKCKECDYKTKWQGCLKEHVKIHAGVKYECKECDYKTVRKDYLKEHVKIHAGVKYECKECDYKTVWKSNLKKHVKIHTGVKYECKECDYKTVLQYHLKEHIKIHTGDEYMCKKCDYKTVRQDRLKQHVKIHTGDEYKCKKCDYKTVRQDRLKEHVKIHTGDEYKCKECDYKTKWQRSLKDHVKIHTGNEYKCKECDYKTTWQRCLKQHVKIHTGDEYKCKECDYKTKWQRSLKEHVKIHTGNEYKCKECDYKTVRQDRLKQHVKIHTGVEYKCEECNYKTTWQGCLKEHVKIHTGVKYECKECDYKTVRKDSLKEHVRIHTGVKYECKECDYKTTWQRSIKEHVKIHSGDEYKCKECDYKTAWKSNLKIHEKIHARVKY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-