Lyun016035.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lamprigera yunnana
Gene Symbol
-
Assembly
GCA_013368075.1
Location
JABVZV010002219.1:6221-24192[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 49 0.0089 0.13 12.9 0.1 1 21 74 94 74 95 0.95
2 49 6.1e-05 0.00086 19.8 1.2 1 23 128 150 128 150 0.99
3 49 3.8e-05 0.00054 20.4 1.8 1 23 155 177 155 177 0.99
4 49 0.025 0.35 11.5 2.0 1 23 182 204 182 204 0.98
5 49 3.3e-05 0.00046 20.6 2.2 1 23 209 231 209 231 0.99
6 49 3.3e-05 0.00046 20.6 2.2 1 23 236 258 236 258 0.99
7 49 3.3e-05 0.00046 20.6 2.2 1 23 263 285 263 285 0.99
8 49 3.3e-05 0.00046 20.6 2.2 1 23 290 312 290 312 0.99
9 49 3.3e-05 0.00046 20.6 2.2 1 23 317 339 317 339 0.99
10 49 0.024 0.34 11.6 2.8 1 23 344 366 344 366 0.98
11 49 0.00018 0.0026 18.3 1.1 1 23 371 393 371 393 0.99
12 49 4.8e-05 0.00068 20.1 1.2 1 23 398 420 398 420 0.99
13 49 3.8e-05 0.00054 20.4 1.8 1 23 425 447 425 447 0.99
14 49 0.28 4 8.2 2.0 1 23 452 474 452 474 0.97
15 49 0.26 3.7 8.3 2.4 1 21 479 499 479 500 0.96
16 49 0.00031 0.0043 17.5 0.5 1 23 506 528 506 528 0.97
17 49 5.7e-05 0.00081 19.8 2.3 1 23 533 555 533 555 0.99
18 49 0.26 3.7 8.3 0.7 1 23 560 582 560 582 0.98
19 49 7.3e-05 0.001 19.5 0.5 1 23 587 609 587 609 0.98
20 49 0.00014 0.002 18.6 2.6 1 23 614 636 614 636 0.99
21 49 0.013 0.18 12.4 3.5 1 23 641 663 641 663 0.99
22 49 0.85 12 6.7 2.3 1 23 668 691 668 691 0.97
23 49 0.0031 0.043 14.4 0.1 1 21 744 764 744 765 0.95
24 49 0.0063 0.089 13.4 1.7 2 23 817 838 816 838 0.97
25 49 0.37 5.3 7.8 4.8 1 23 843 865 843 865 0.98
26 49 0.21 2.9 8.6 1.1 1 23 870 892 870 892 0.97
27 49 0.01 0.14 12.8 1.0 1 23 897 919 897 919 0.99
28 49 0.0025 0.035 14.7 0.8 1 23 924 946 924 946 0.99
29 49 0.00039 0.0056 17.2 3.7 1 23 951 973 951 973 0.98
30 49 0.00046 0.0065 17.0 1.8 1 23 978 1000 978 1000 0.99
31 49 0.099 1.4 9.6 4.2 1 23 1005 1027 1005 1027 0.99
32 49 0.037 0.53 11.0 5.4 1 23 1032 1054 1032 1054 0.98
33 49 0.027 0.38 11.4 1.6 1 23 1059 1081 1059 1081 0.99
34 49 0.0031 0.044 14.4 1.6 1 23 1086 1108 1086 1108 0.99
35 49 7.2e-05 0.001 19.5 2.9 1 23 1113 1135 1113 1135 0.98
36 49 0.00027 0.0039 17.7 1.2 1 23 1140 1162 1140 1162 0.98
37 49 0.00015 0.0021 18.5 1.4 1 23 1167 1189 1167 1189 0.99
38 49 0.13 1.8 9.3 4.2 2 23 1204 1225 1203 1225 0.97
39 49 0.027 0.38 11.4 1.6 1 23 1230 1252 1230 1252 0.99
40 49 0.0031 0.044 14.4 1.6 1 23 1257 1279 1257 1279 0.99
41 49 0.00031 0.0043 17.5 0.5 1 23 1284 1306 1284 1306 0.98
42 49 7.2e-05 0.001 19.5 2.9 1 23 1311 1333 1311 1333 0.98
43 49 0.00027 0.0039 17.7 1.2 1 23 1338 1360 1338 1360 0.98
44 49 0.00015 0.0021 18.5 1.4 1 23 1365 1387 1365 1387 0.99
45 49 0.024 0.34 11.6 3.1 1 23 1392 1414 1392 1414 0.98
46 49 0.00015 0.0021 18.5 1.4 1 23 1419 1441 1419 1441 0.99
47 49 0.024 0.34 11.6 3.1 1 23 1446 1468 1446 1468 0.98
48 49 0.00011 0.0016 18.9 3.5 1 23 1473 1495 1473 1495 0.99
49 49 4.1e-05 0.00059 20.3 1.8 1 23 1500 1522 1500 1522 0.99

Sequence Information

Coding Sequence
ATGGATGTTGATTCCAACGAAACTTGCGCCATAAAATCAGAAGTTATCGTTAACGAGACATTTTTAGTTTGTGGAAAATACGAAGATTGTGCCGGTGAACGGTTGAAATTGGATCCAGTGGATTATGAAAGCGAGGAATTAAAATCGGAACCGATAGATTTCGAAGAACCATTTAGATGCAAGGAGGAAGTTAATCTTGTACCTGTTGCTCACACAcaatacatttgtaatgaatgcAATGTTATGACAACGGACAAAGATACTCTAAAAGAACATCTGAAAATCaccaaaaatgttcaatacTTGTGTAAGGAGTGTAACTTTAAAACCTGGCTGAATTGTTCAATAaaagaacatttgaaaattcatatgcctgttgaatataaatgtcaggaatgtgactataaagcAGCACACAAAGGCAATCTAAAAATTCACATGCGTATTCATACAGGAGAAAAATATAAGTGTtcggaatgtgactataaaacggtgCGGAAATATTCTCTAAAAATACATATGAAGATTCattcaggtgatgaatataaatgtaagaaatgtgattataaaacgccatggaaacagaatctaaaaaGTCATATGACAATTCATAGTggaaatgaatataaatgtaaggaatgtgactataaaacggtgCGGAAATATTCTCTAAAAATACATATGAAGATTCattcaggtgatgaatataaatgtaaggaatgtgactataaaacggtgCGGAAATATTCTCTAAAAATACATATGAAGATTCattcaggtgatgaatataaatgtaaggaatgtgactataaaacggtgCGGAAATATTCTCTAAAAATACATATGAAGATTCattcaggtgatgaatataaatgtaaggaatgtgactataaaacggtgCGGAAATATTCTCTAAAAATACATATGAAGATTCattcaggtgatgaatataaatgtaaggaatgtgactataaaacggtgCGGAAATATTCTCTAAAAATACATATGAAGATTCattcaggtgatgaatataagtgcaaagaatgtgattataaaacagtgtggaaaagttaTCTAACAACTCATATGAAGTTTCATTCAGGTGATCTATATAAATGTatggaatgtgactataaagcAGCACACAAAGGCAATCTAAAAATTCACATGCGTATTCATACAGGAGAAAAATATAAGTGTtcggaatgtgactataaagcAGCACacaaaggtaatttaaaaattcacatgcGTATTCATACAGGCGAAAAATATAAGTGTtcggaatgtgactataaaacagtccGTAAATATTCTCTAAAAATACATATGAAGATTCattcaggtgatgaatataagtgcaaagaatgtgattataaaacactgtggaaaaGTTATCTAACGACTCATATGaagattcatacaggtgatgaatataagtgcaacgaatgtgattacaaaacaacttggaaaaattgtctacaaaCACATATGAAGATTCAGAAAGGTGaattatataaatgtaaggaatgcgaCTTTAAATCAGCACAAAAAGGTAATCTAAAAATTCACATGGGAATTCATACAGGAGAAAAATATAAGTGTtcagaatgtgactataaaacagtgcagaaaTATTCTCTAAAAACACATATGaagattcatacaggtgatgaatataagtgtttagaatgtgaatataaaacggtgtggaaaaATGGTTTAAAAACACATATGAAGATTCATAAAGGTGAtctatataaatgtaaggaatgtgactataacaCAGCACGTAAAGGTGATCTAAAAATTCACATGAgcattcatacaggtgaagaatataagtgttcagaatgtgactataaaacagtgcggaaaaattatctaaaaacaCATATGAAGATTCattcaggtgatgaatataagtgttcagaatgtgaatataaaacagtGTTGAAAACTTATCTAACACATCATATGAAGattcatacgggtgatgaatataagtgctaCGAATGTGACTACAAGACGACATGGAAACATTCTCTAGGAACACATATTATGAAGATTCATAAAGTTtgtgaaaaatatgaagATTATGCCGGTGAACAGTTGAAATTGGACCCAGTGTATTATGAAAGCGAAGAATTAAAATCTGAACTGATAGATTTCGAAGAATCATTCAAATGCAAGGAAGTAGATAATCTTGTACCTGTTATTCCCACACAATACATCTGTAATGAATGCGGCGTTATGACAACAGACAAAGATACTCTAaaagaacatttgaaaataaccaaaaatgttcaatacttatgtaaggaatgtaactttaaaacctGGTTGGAATGTTCAATAAAAGAACATTTAAGGATTCACGATAAAATGGGCGGTACATATATTTCTAAGAAACTTAATTCTAAGGCGCCTCAGTCTAGAACTGAAAAATCTTGCAatgaatgcgattataaaacacagtacAAACGTTATCTAAAagcacatatgaaaattcatatggctgttgaatataaatgtcaggaatgtgattttaaaacaaaatgccaacagaatctaaagaaccatgtcaaaattcatagtggtgatgaacataagtgtaaagaatgtgattataaaacgccaTGGGAACAGAATCTAGAAAGTCATATGACAATTCATAGttgtaatgaatataaatgtaaggaatgtgactataaaacagcatggaacAATTCTCTACAAACACATATGAAGATTCATTCAAGTGATGACTATAAGTGCAacgaatgtgactacaaaacggCATGGAAAGATTCTCTACAAACACATATGAagattcatactggtaatgaatatttttgtgataaatgtgattataaaacagcacaAAAACATAATCTAAAAAATCACATGAATATTCATACAGGAGAAAAATATAAGTGTttggaatgtgactataaaacagtgcggaaattTTCTCTAAATAGTCATATGAAGATTCattcaggtgatgaatataagtgcaaagaatgtgactataaaacgatGTGGAAACATTCTTTAAAAACACATATGAAGATTCattcaggtgatgaatataagtgcaaagaatgtgattataaaacattgcggAAAACTTGTCTAAAAAGTCATATGAggattcatacaggtgatgaatataagtgtaacgaatgtgactaCAAGACGATATGGAAACATGGTCTGGAAACACATATGAAGATTCATATAGGTGAtctatataaatgtaaggaatgtgattataaaacagcgtggAAAAGTTATCTAACAACTCATATGAAGATTCATTCAGGTGAtctatataaatgtaaggaatgtgactataaagcAGCAcgcaaaagtaatttaaaaaatcacatGCATATTCATTCTGGAGAAAAACATAAGTGTtcggaatgtgactataaagcAGCATACAAAGGTAATCTAAAAATTCACATGCGCATTCATACAGGAGAAAAATATAAGTGTtcggaatgtgattataaaacagtccGGAAATTTGCCCTAAATAGTCATATGAAGATTCattcaggtgatgaatatagATTCattcaggtgatgaatataggtaagtgcaaagaatgtgattataaaacattgcggAAAACTTGTCTAAAAAGTCATATGAggattcatacaggtgatgaatataagtgtaacgaatgtgactaCAAGACGATATGGAAACATGGTCTGGAAACACATATGAAGATTCATATAGGTGAtctatataaatgtaaggaatgtgattataaaacagcgtggAAAAGTTATCTAACAACTCATATGAAGATTCATATAGGTGAtctatataaatgtaaggaatgtgactataaagcAGCATACAAAGGTAATCTAAAAATTCACATGAGCATTCATACAGGTGAtctatataaatgtaaggaatgtgactataaagcAGCAcgcaaaagtaatttaaaaaatcacatGCATATTCATTCTGGAGAAAAACATAAGTGTtcggaatgtgactataaagcAGCATACAAAGGTAATCTAAAAATTCACATGCGCATTCATACAGGAGAAAAATATAAGTGttcagaatgtgattataaaacagtccGGAAATTTGCCCTAAATAGTCATATGAAGATTCattcaggtgatgaatataagtgcaaagaatgtgattataaaacagtgtggaaaagttaTCTAAAAACTCATATGAAgtttcatacaggtgaagaatataagtgttcagaatgtgattataaaacagtccGGAAATTTGCCCTAAATAGTCATATGAAGATTCattcaggtgatgaatataagtgcaaagaatgtgattataaaacagtgtggaaaagttaTCTAAAAACTCATATGAAGTTTCATACAGGTGAtctatataaatgtaaggaatgtaactataaaacagcaCACAAAGGTAGTCTAAAAAGTCACATGCGTATTCATACAAGAGAAAAATATAAGTGTtcagaatgtgactataaagcAGTACGGAAATATTCTCTAAAAAGACATATGAAGATTCattcaggtgatgaatataggtaa
Protein Sequence
MDVDSNETCAIKSEVIVNETFLVCGKYEDCAGERLKLDPVDYESEELKSEPIDFEEPFRCKEEVNLVPVAHTQYICNECNVMTTDKDTLKEHLKITKNVQYLCKECNFKTWLNCSIKEHLKIHMPVEYKCQECDYKAAHKGNLKIHMRIHTGEKYKCSECDYKTVRKYSLKIHMKIHSGDEYKCKKCDYKTPWKQNLKSHMTIHSGNEYKCKECDYKTVRKYSLKIHMKIHSGDEYKCKECDYKTVRKYSLKIHMKIHSGDEYKCKECDYKTVRKYSLKIHMKIHSGDEYKCKECDYKTVRKYSLKIHMKIHSGDEYKCKECDYKTVRKYSLKIHMKIHSGDEYKCKECDYKTVWKSYLTTHMKFHSGDLYKCMECDYKAAHKGNLKIHMRIHTGEKYKCSECDYKAAHKGNLKIHMRIHTGEKYKCSECDYKTVRKYSLKIHMKIHSGDEYKCKECDYKTLWKSYLTTHMKIHTGDEYKCNECDYKTTWKNCLQTHMKIQKGELYKCKECDFKSAQKGNLKIHMGIHTGEKYKCSECDYKTVQKYSLKTHMKIHTGDEYKCLECEYKTVWKNGLKTHMKIHKGDLYKCKECDYNTARKGDLKIHMSIHTGEEYKCSECDYKTVRKNYLKTHMKIHSGDEYKCSECEYKTVLKTYLTHHMKIHTGDEYKCYECDYKTTWKHSLGTHIMKIHKVCEKYEDYAGEQLKLDPVYYESEELKSELIDFEESFKCKEVDNLVPVIPTQYICNECGVMTTDKDTLKEHLKITKNVQYLCKECNFKTWLECSIKEHLRIHDKMGGTYISKKLNSKAPQSRTEKSCNECDYKTQYKRYLKAHMKIHMAVEYKCQECDFKTKCQQNLKNHVKIHSGDEHKCKECDYKTPWEQNLESHMTIHSCNEYKCKECDYKTAWNNSLQTHMKIHSSDDYKCNECDYKTAWKDSLQTHMKIHTGNEYFCDKCDYKTAQKHNLKNHMNIHTGEKYKCLECDYKTVRKFSLNSHMKIHSGDEYKCKECDYKTMWKHSLKTHMKIHSGDEYKCKECDYKTLRKTCLKSHMRIHTGDEYKCNECDYKTIWKHGLETHMKIHIGDLYKCKECDYKTAWKSYLTTHMKIHSGDLYKCKECDYKAARKSNLKNHMHIHSGEKHKCSECDYKAAYKGNLKIHMRIHTGEKYKCSECDYKTVRKFALNSHMKIHSGDEYRFIQVMNIGKCKECDYKTLRKTCLKSHMRIHTGDEYKCNECDYKTIWKHGLETHMKIHIGDLYKCKECDYKTAWKSYLTTHMKIHIGDLYKCKECDYKAAYKGNLKIHMSIHTGDLYKCKECDYKAARKSNLKNHMHIHSGEKHKCSECDYKAAYKGNLKIHMRIHTGEKYKCSECDYKTVRKFALNSHMKIHSGDEYKCKECDYKTVWKSYLKTHMKFHTGEEYKCSECDYKTVRKFALNSHMKIHSGDEYKCKECDYKTVWKSYLKTHMKFHTGDLYKCKECNYKTAHKGSLKSHMRIHTREKYKCSECDYKAVRKYSLKRHMKIHSGDEYR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-