Lyun009403.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lamprigera yunnana
Gene Symbol
-
Assembly
GCA_013368075.1
Location
JABVZV010001723.1:417969-435911[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 63 0.0017 0.025 15.2 2.1 1 23 73 95 73 95 0.98
2 63 0.04 0.56 10.9 0.5 1 23 100 122 100 122 0.98
3 63 0.00049 0.0069 16.9 1.7 1 23 127 149 127 149 0.99
4 63 0.0099 0.14 12.8 0.6 1 23 154 176 154 176 0.99
5 63 0.081 1.1 9.9 1.0 1 23 181 203 181 203 0.98
6 63 0.0001 0.0015 19.0 4.6 1 23 208 230 208 230 0.99
7 63 0.081 1.1 9.9 1.0 1 23 235 257 235 257 0.98
8 63 0.00049 0.0069 16.9 1.7 1 23 262 284 262 284 0.99
9 63 0.03 0.42 11.3 4.2 1 23 289 311 289 311 0.99
10 63 6e-05 0.00085 19.8 1.3 1 23 316 338 316 338 0.99
11 63 0.36 5 7.9 2.7 1 23 343 365 343 365 0.98
12 63 0.26 3.7 8.3 0.3 1 23 370 392 370 392 0.98
13 63 0.00052 0.0074 16.8 1.3 1 23 397 419 397 419 0.99
14 63 0.0001 0.0015 19.0 4.6 1 23 424 446 424 446 0.99
15 63 0.0072 0.1 13.2 0.8 1 23 451 473 451 473 0.99
16 63 0.0001 0.0015 19.0 4.6 1 23 478 500 478 500 0.99
17 63 0.0072 0.1 13.2 0.8 1 23 505 527 505 527 0.99
18 63 0.00049 0.0069 16.9 1.7 1 23 532 554 532 554 0.99
19 63 0.005 0.07 13.7 0.8 1 23 559 581 559 581 0.99
20 63 0.0025 0.035 14.7 3.2 1 23 586 608 586 608 0.99
21 63 0.013 0.18 12.4 1.4 1 23 613 635 613 635 0.98
22 63 0.081 1.1 9.9 1.0 1 23 640 662 640 662 0.98
23 63 0.26 3.7 8.3 0.3 1 23 667 689 667 689 0.98
24 63 0.0035 0.05 14.2 4.1 1 23 694 716 694 716 0.99
25 63 0.0001 0.0015 19.0 4.6 1 23 721 743 721 743 0.99
26 63 0.0041 0.058 14.0 0.9 1 23 748 770 748 770 0.99
27 63 0.00083 0.012 16.2 1.4 1 23 775 797 775 797 0.99
28 63 0.00052 0.0074 16.8 1.3 1 23 802 824 802 824 0.99
29 63 0.0035 0.05 14.2 4.1 1 23 829 851 829 851 0.99
30 63 0.0001 0.0015 19.0 4.6 1 23 856 878 856 878 0.99
31 63 0.0041 0.058 14.0 0.9 1 23 883 905 883 905 0.99
32 63 0.00049 0.0069 16.9 1.7 1 23 910 932 910 932 0.99
33 63 0.44 6.2 7.6 3.0 1 23 937 959 937 959 0.98
34 63 0.00049 0.0069 16.9 1.7 1 23 964 986 964 986 0.99
35 63 0.0055 0.078 13.6 3.7 1 23 991 1013 991 1013 0.99
36 63 0.00083 0.012 16.2 1.4 1 23 1018 1040 1018 1040 0.99
37 63 0.00083 0.012 16.2 1.4 1 23 1045 1067 1045 1067 0.99
38 63 0.0035 0.05 14.2 4.1 1 23 1072 1094 1072 1094 0.99
39 63 0.44 6.2 7.6 3.0 1 23 1099 1121 1099 1121 0.98
40 63 0.0035 0.05 14.2 4.1 1 23 1126 1148 1126 1148 0.99
41 63 0.0072 0.1 13.2 0.8 1 23 1153 1175 1153 1175 0.99
42 63 0.016 0.22 12.2 1.5 1 23 1242 1264 1242 1264 0.98
43 63 0.15 2.1 9.1 2.3 1 23 1269 1291 1269 1291 0.98
44 63 0.35 4.9 7.9 8.3 1 23 1296 1318 1296 1318 0.98
45 63 1.7 24 5.8 1.9 1 23 1323 1345 1323 1345 0.98
46 63 0.0012 0.017 15.7 1.2 1 23 1350 1372 1350 1372 0.97
47 63 0.062 0.88 10.3 2.6 1 23 1377 1399 1377 1399 0.98
48 63 0.38 5.3 7.8 1.1 1 23 1404 1426 1404 1426 0.97
49 63 0.0007 0.01 16.4 3.0 1 23 1431 1453 1431 1453 0.99
50 63 0.084 1.2 9.9 1.2 1 23 1458 1480 1458 1480 0.98
51 63 0.00038 0.0053 17.2 1.1 1 23 1485 1507 1485 1507 0.99
52 63 0.0032 0.045 14.3 1.9 1 23 1512 1534 1512 1534 0.98
53 63 0.0041 0.058 14.0 1.8 1 23 1539 1561 1539 1561 0.99
54 63 0.00016 0.0023 18.4 1.4 1 23 1566 1588 1566 1588 0.98
55 63 0.021 0.3 11.7 3.1 1 23 1593 1615 1593 1615 0.99
56 63 1.1 15 6.4 1.5 1 23 1620 1642 1620 1642 0.98
57 63 0.1 1.5 9.6 1.7 1 23 1647 1669 1647 1669 0.98
58 63 0.0032 0.045 14.3 1.9 1 23 1674 1696 1674 1696 0.98
59 63 0.0041 0.058 14.0 1.8 1 23 1701 1723 1701 1723 0.99
60 63 0.00016 0.0023 18.4 1.4 1 23 1728 1750 1728 1750 0.98
61 63 0.021 0.3 11.7 3.1 1 23 1755 1777 1755 1777 0.99
62 63 0.0029 0.041 14.5 1.6 1 23 1782 1804 1782 1804 0.98
63 63 0.015 0.21 12.3 1.6 1 23 1809 1831 1809 1831 0.98

Sequence Information

Coding Sequence
ATGGATATCAACGCGATAGACTTTATTGAAagatttgctataaaatcagaagtgattttaacagagacATTCTCTTTTTGTGGGAAACACGAAGatttttggaGTAAGGAACAAAAACCGAAGCCAGTAGATTATGACGAATCTTTTAAACCTAAGGAAGAAAATGATCTGACAGAACCCATGGATACACATACTGCTTCAAGAACTAGGAATGAATATGTTTGTAATCAATGTAATTACACAACATTCAACAAAAAGGATTTAAACAAACATGTGAAGATTCACAAAAGTGCTGTATATAGTTGcgaaaaatgtgattataaaacagcatggaaaagTGATCTATtgcgacatgtcaaaattcatacaggtaatgaatataagtgtaaagaatgtgattataaaacagtacgaaaaaatcttctaaaggaacatcttaaaattcatacaggtgatgaatataagtgtaaagaatgtgattataaaacagcatggaaaagTGATCTATtgcgacatgtcaaaattcatacaggtaatgaatataagtgtaaagaatgtgattataaaacagtatggaaaaatcttctaaaggaacatcttaaaattcatacaggtgatgaatataagtgtaaagaatgtgattataaaacagtacggaaaagtcatctaaagcaacatcttaaaattcatacaggtgatgaatataagtgtaaagaatgtgattataaaacagtatggaaaaatcttctaaaggaacatcttaaaattcatacaggtgatgaatataagtgtaaagaatgtgattataaaacagtacgaaaaaatcttctaaaggaacatcttaaaattcatacaggtgatggatataaatgtaaagaatgtgattataaaacagtatggaaaagtcatctaaagcaacatcgtaaaattcatacaggtgatgaatataagtgtaaagaatgtgattataaaacagtacggaaaagtgatctattgcgacatgtcaaaattcatacaggtaatgaatataagtgtaaagaatgtgattataaaacagtatggaaaaatcattttgaagaacatcttaaaattcatacaggtgatgaatataagtgtacagagTGTGATTATataacagtatggaaaaatcttctaaaggaacatgtcaaaattcacacaggtgatgaatataaatgtaaagaatgtgattataaaacagtacgaaaaaatcttctaaaggaacatcttaatattcatacaggtgatgaatataaatgtaaagaatgtgattataaaacagtacggaaaagtcatctaaagcaacatcttaaaattcatacaggtgatgaatataagtgtaaagaatgtgattataaaacagcatggaaaagtaatctaatgcaacatgtcaaaattcatacaggtaatgaatataagtgtaaagaatgtgattataaaacagtacggaaaagtcatctaaagcaacatcttaaaattcatacaggtgatgaatataagtgtaaagaatgtgattataaaacagcatggaaaagtaatctaatgcaacatgtcaaaattcatacaggtaatgaatataagtgtaaagaatgtgattataaaacagtacgaaaaaatcttctaaaggaacatcttaaaattcatacaggtgatgaatataagtgtaaagactgtgattataaaacagcatggaaaagtaatctaatgcaacatgtcaaaatccatacaggtaaagaatataagtgtaaagaatgtgatcataaaacagtacgaaaaaatcttctaaaggaacatcttaaaattcatacaggtgatgaatataagtgtcacgaatgtgattataaaacagcatggaaaagtaatctagtgcaacatgtcaaaatccatacaggtaatgaatataagtgtaaagaatgtgattataaaacagtatggaaaaatcttctaaaggaacatcttaaaattcatacaggtgatgaatataagtgtacagagTGTGATTATataacagtatggaaaaatcttctaaaggaacatgtcaaaattcatacaggtgatgaatacaaatgtaaagaatgtcattataaaacagtacgaaaaaatcttctaaaggaacatcttaaaattcatacaggcgatgaatataaatgtaaagaatgtgattataaaacagtacggaaaagtcatctaaagcaacatcttaaaattcatacaggtgatgaatataagtgtaatgaatgtgattataaaacagaatggaaaagtaatctaatgcgacatgtcaaaattcatacaggtaatgaatataaatgtaaagaatgtgattataaaacagtacgaaaaaatcttctaaaggaacatgtcaaaattcatacaggtgatgaatataagtgtaaagaatgtgattataaaacagtacgaaaaaatcttctaaaggaacatcttaatattcatacaggtgatgaatataaatgtaaagaatgtcattataaaacagtacgaaaaaatcttctaaaggaacatcttaaaattcatacaggcgatgaatataaatgtaaagaatgtgattataaaacagtacggaaaagtcatctaaagcaacaccttaaaattcatacaggtgatgaatataagtgtaatgaatgtgattataaaacagaatggaaaagtaatctaatgcgacatgtcaaaattcatacaggtaatgaatataagtgtaaagaatgtgattataaaacagtacgaaaaaatcttctaaaggaacatcttaaaattcatacaggtaatgaatataaatgtaaagaatgtcattataaaacagtatggaaaaatcttctaaaggaacatcttaaaattcatacaggtaatgaatataaatgtaaagaatgtgattataaaacagtacgaaaaaatcttctaaaggaacatcttaaaattcatacaggtaatgaatataaatgtaaagaatgtcattataaaacagtacgaaaaaatcttctaaaggaacatgtcaaaattcatacaggtaatgaatataaatgtaaagaatgtgattataaaacagtacgaaaaaatcttctaaaggaacatgtcaaaatccatacaggtaatgaatataaatgtaaagaatgtgattataaaacagtacgaaaaaatcttctaaaggaacatgtcaaaattcatacaggtaatgaatataaatgtaaagaatgtcattataaaacagtacgaaaaaatcttctaaaggaacatcttaaaattcatacaggtgatgaatataaatgtaaagaatgtcattataaaacagtatggaaaaatcttctaaaggaacatcttaaaattcatacaggtaatgaatataaatgtaaagaatgtcattataaaacagtacgaaaaaatcttctaaaggaacatcttaaaattcatacaggtaatgaatataaatgtaaagaatgtgattataaaacagcatggaaaagtaatctaatgcaacatgtcaaaattcatacagattGTGGGAGTAAACTGAAACCGGAGCCAGTAGATTATGAAGAATCATTTAAacctaaagaagaaaatgatctgACAAAACCCATCGTTACACATACTGCACCGATGCAACAAGATTATTGTAATGACTCTAATTTTATAACACAGATTTTCTCTTTATCACCACGGTTGAAAACTCCAAGAAGTGGAAATGAAtatgtttgtaatgaatgtagtTACACCACATTGAACAAAAGTTATCTAAAGAAACACGTAAAGATTCACAAAAGTGCTGCATATAATTGtgagaaatgtgattataatacacGATGGAAAAGTTCCTTCACAGCACATACTAAAACTCattctggtaatgaatataagtgtaaaaaatgtgattataaaactttacGGAAATGTCATCTAAacaaacatatcaaaattcatacaggtgatgaatataagtgtaacaaatgtaattttaaaactgcatGGAAGAATAaactaatgcaacatgtcaaaattcatagtgatgatgaatataagtgtaaagaatgtgattttaaaactgtacggaaaagtgATTTAATGCAACATGCCCAACTTCATAGTCGTGACaaatataactgtaaagaatgtgattataagacggtatggaaaaatcatctaaaggaacatatcagAAGTCATACAgacgatgaatataagtgtaaagaatgtgattttaaaactgtatggaaaaataatctaattcaACATagcaaaattcatactggtgatgaatataaatgtagtgaatgtgattataaaacagcaaggCAACATAGTTTaaagcaacatgttaaaattcacacaggtaatgaatataagtgcaaagagtgtgattttaaaacagtatggaaaagttatctaaaggaacatgtcaaaattcatactggtgatgattataagtgtaaagaatgtgattataaaactatattgAAAAGTAACCTAAtcaaacatgtcaaaattcatagtggtgatgaatataagtgtaaagaatgtgattttaaaactgtgcgGAAACgttatctaatgcaacatgttaacattcatacaggtgatgaatacaagtgtacagaatgtgattttaaaactgtgcAGAAACgttatctaatgcaacatgtcaaagtTCATAgaggtgatgaatacaagtgtaaagaatgtgattttaaaactatacGGAAAAGTGATCTACTGCGACATATCCAACTTCATAGTGGTGAgaaatataagtgcaaagaatgtgattataaaacagtatggaaaaatcatctaaaggaacatatcagaagtcatacaggtgaagaatataagtgtaaagaatgtaattttaaaactgcatGGAAGAATAaactaatgcaacatgtcaaaattcatacaggtgatgaatataagtgtaaagaatgtaattttaaaactgcatGGAAGaataatctaaagcaacatgtcaaaattcatagtggtgatgaatataagtgtaaagaatgtgattttaaaactgtgcgGAAACgttatctaatgcaacatgttaacattcatacaggtgatgaatacaagtgtacagaatgtgattttaaaactgtgcAGAAACgttatctaatgcaacatgtcaaagtTCATAgaggtgatgaatacaagtgtaaagaatgtgattttaaaactatacGGAAAAGTGATCTACTGCGACATATCCAACTTCATAGTGGTGAgaaatataagtgcaaagaatgtgattataaaacagtatggaaaaatcatctaaaggaacatatcagaagtcatacaggtgaagaatataagtgtaaagaatgtgactttaaaactgTGCGCAAAAattatctaatgcaacatgtcaacgttcatacaggcgatgaatataagtgtaaagaatgtaattataaatctgtttggaaaagtaatctaaagcaacatgtcaaaattcatactggtgatgaatataaatgtaaagaatgtgattataaaacaaacatTCCTAAAAAGTCTAGATTGAAGAAAAATGTAGTTCCCTCATTAAAATTATCTATAGATAGTCAAAGTCCTGATAGATATGTTGATGTGGATTTAGCTCCCAAAAGCCTAAACAGATTAAATTGTAGAAAGGCATTAAGACAACTAACATCAAAATCTAGCAAATGTTATGACTAA
Protein Sequence
MDINAIDFIERFAIKSEVILTETFSFCGKHEDFWSKEQKPKPVDYDESFKPKEENDLTEPMDTHTASRTRNEYVCNQCNYTTFNKKDLNKHVKIHKSAVYSCEKCDYKTAWKSDLLRHVKIHTGNEYKCKECDYKTVRKNLLKEHLKIHTGDEYKCKECDYKTAWKSDLLRHVKIHTGNEYKCKECDYKTVWKNLLKEHLKIHTGDEYKCKECDYKTVRKSHLKQHLKIHTGDEYKCKECDYKTVWKNLLKEHLKIHTGDEYKCKECDYKTVRKNLLKEHLKIHTGDGYKCKECDYKTVWKSHLKQHRKIHTGDEYKCKECDYKTVRKSDLLRHVKIHTGNEYKCKECDYKTVWKNHFEEHLKIHTGDEYKCTECDYITVWKNLLKEHVKIHTGDEYKCKECDYKTVRKNLLKEHLNIHTGDEYKCKECDYKTVRKSHLKQHLKIHTGDEYKCKECDYKTAWKSNLMQHVKIHTGNEYKCKECDYKTVRKSHLKQHLKIHTGDEYKCKECDYKTAWKSNLMQHVKIHTGNEYKCKECDYKTVRKNLLKEHLKIHTGDEYKCKDCDYKTAWKSNLMQHVKIHTGKEYKCKECDHKTVRKNLLKEHLKIHTGDEYKCHECDYKTAWKSNLVQHVKIHTGNEYKCKECDYKTVWKNLLKEHLKIHTGDEYKCTECDYITVWKNLLKEHVKIHTGDEYKCKECHYKTVRKNLLKEHLKIHTGDEYKCKECDYKTVRKSHLKQHLKIHTGDEYKCNECDYKTEWKSNLMRHVKIHTGNEYKCKECDYKTVRKNLLKEHVKIHTGDEYKCKECDYKTVRKNLLKEHLNIHTGDEYKCKECHYKTVRKNLLKEHLKIHTGDEYKCKECDYKTVRKSHLKQHLKIHTGDEYKCNECDYKTEWKSNLMRHVKIHTGNEYKCKECDYKTVRKNLLKEHLKIHTGNEYKCKECHYKTVWKNLLKEHLKIHTGNEYKCKECDYKTVRKNLLKEHLKIHTGNEYKCKECHYKTVRKNLLKEHVKIHTGNEYKCKECDYKTVRKNLLKEHVKIHTGNEYKCKECDYKTVRKNLLKEHVKIHTGNEYKCKECHYKTVRKNLLKEHLKIHTGDEYKCKECHYKTVWKNLLKEHLKIHTGNEYKCKECHYKTVRKNLLKEHLKIHTGNEYKCKECDYKTAWKSNLMQHVKIHTDCGSKLKPEPVDYEESFKPKEENDLTKPIVTHTAPMQQDYCNDSNFITQIFSLSPRLKTPRSGNEYVCNECSYTTLNKSYLKKHVKIHKSAAYNCEKCDYNTRWKSSFTAHTKTHSGNEYKCKKCDYKTLRKCHLNKHIKIHTGDEYKCNKCNFKTAWKNKLMQHVKIHSDDEYKCKECDFKTVRKSDLMQHAQLHSRDKYNCKECDYKTVWKNHLKEHIRSHTDDEYKCKECDFKTVWKNNLIQHSKIHTGDEYKCSECDYKTARQHSLKQHVKIHTGNEYKCKECDFKTVWKSYLKEHVKIHTGDDYKCKECDYKTILKSNLIKHVKIHSGDEYKCKECDFKTVRKRYLMQHVNIHTGDEYKCTECDFKTVQKRYLMQHVKVHRGDEYKCKECDFKTIRKSDLLRHIQLHSGEKYKCKECDYKTVWKNHLKEHIRSHTGEEYKCKECNFKTAWKNKLMQHVKIHTGDEYKCKECNFKTAWKNNLKQHVKIHSGDEYKCKECDFKTVRKRYLMQHVNIHTGDEYKCTECDFKTVQKRYLMQHVKVHRGDEYKCKECDFKTIRKSDLLRHIQLHSGEKYKCKECDYKTVWKNHLKEHIRSHTGEEYKCKECDFKTVRKNYLMQHVNVHTGDEYKCKECNYKSVWKSNLKQHVKIHTGDEYKCKECDYKTNIPKKSRLKKNVVPSLKLSIDSQSPDRYVDVDLAPKSLNRLNCRKALRQLTSKSSKCYD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-