Lyun015949.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lamprigera yunnana
Gene Symbol
-
Assembly
GCA_013368075.1
Location
JABVZV010002203.1:11492-47042[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 70 0.11 1.5 9.5 1.0 1 23 100 122 100 122 0.98
2 70 0.11 1.5 9.5 1.0 1 23 127 149 127 149 0.98
3 70 0.11 1.5 9.5 1.0 1 23 154 176 154 176 0.98
4 70 0.11 1.5 9.5 1.0 1 23 181 203 181 203 0.98
5 70 0.11 1.5 9.5 1.0 1 23 208 230 208 230 0.98
6 70 0.11 1.5 9.5 1.0 1 23 235 257 235 257 0.98
7 70 0.11 1.5 9.5 1.0 1 23 262 284 262 284 0.98
8 70 0.11 1.5 9.5 1.0 1 23 289 311 289 311 0.98
9 70 0.11 1.5 9.5 1.0 1 23 316 338 316 338 0.98
10 70 0.11 1.5 9.5 1.0 1 23 343 365 343 365 0.98
11 70 0.11 1.5 9.5 1.0 1 23 370 392 370 392 0.98
12 70 0.11 1.5 9.5 1.0 1 23 397 419 397 419 0.98
13 70 0.11 1.5 9.5 1.0 1 23 424 446 424 446 0.98
14 70 0.11 1.5 9.5 1.0 1 23 451 473 451 473 0.98
15 70 0.11 1.5 9.5 1.0 1 23 478 500 478 500 0.98
16 70 0.11 1.5 9.5 1.0 1 23 505 527 505 527 0.98
17 70 0.11 1.5 9.5 1.0 1 23 532 554 532 554 0.98
18 70 0.11 1.5 9.5 1.0 1 23 559 581 559 581 0.98
19 70 0.11 1.5 9.5 1.0 1 23 586 608 586 608 0.98
20 70 0.11 1.5 9.5 1.0 1 23 613 635 613 635 0.98
21 70 0.11 1.5 9.5 1.0 1 23 640 662 640 662 0.98
22 70 0.11 1.5 9.5 1.0 1 23 667 689 667 689 0.98
23 70 0.11 1.5 9.5 1.0 1 23 694 716 694 716 0.98
24 70 0.11 1.5 9.5 1.0 1 23 721 743 721 743 0.98
25 70 0.11 1.5 9.5 1.0 1 23 748 770 748 770 0.98
26 70 0.11 1.5 9.5 1.0 1 23 775 797 775 797 0.98
27 70 0.11 1.5 9.5 1.0 1 23 802 824 802 824 0.98
28 70 0.11 1.5 9.5 1.0 1 23 829 851 829 851 0.98
29 70 0.11 1.5 9.5 1.0 1 23 856 878 856 878 0.98
30 70 0.11 1.5 9.5 1.0 1 23 883 905 883 905 0.98
31 70 5.7e-06 8e-05 23.0 1.8 1 23 930 952 930 952 0.99
32 70 1.1 16 6.3 2.5 1 23 957 979 957 979 0.98
33 70 0.15 2.1 9.1 0.5 1 23 984 1006 984 1006 0.98
34 70 0.00011 0.0016 18.9 1.3 1 23 1011 1033 1011 1033 0.99
35 70 0.022 0.31 11.7 0.9 1 23 1038 1060 1038 1060 0.98
36 70 1.4e-05 0.0002 21.7 1.6 1 23 1065 1087 1065 1087 0.99
37 70 0.15 2.1 9.1 0.5 1 23 1092 1114 1092 1114 0.98
38 70 0.15 2.1 9.1 0.5 1 23 1119 1141 1119 1141 0.98
39 70 9.9e-05 0.0014 19.1 1.9 1 23 1146 1168 1146 1168 0.99
40 70 0.00021 0.003 18.1 1.8 1 23 1173 1195 1173 1195 0.98
41 70 0.11 1.5 9.5 1.0 1 23 1200 1222 1200 1222 0.98
42 70 0.11 1.5 9.5 1.0 1 23 1227 1249 1227 1249 0.98
43 70 0.00023 0.0032 18.0 1.0 1 23 1254 1276 1254 1276 0.99
44 70 1.4e-05 0.0002 21.7 1.6 1 23 1281 1303 1281 1303 0.99
45 70 0.11 1.5 9.5 1.0 1 23 1308 1330 1308 1330 0.98
46 70 4.7e-05 0.00066 20.1 1.6 1 23 1335 1357 1335 1357 0.99
47 70 0.11 1.5 9.5 1.0 1 23 1362 1384 1362 1384 0.98
48 70 1.4e-05 0.0002 21.7 1.6 1 23 1389 1411 1389 1411 0.99
49 70 0.11 1.5 9.5 1.0 1 23 1416 1438 1416 1438 0.98
50 70 1.1e-05 0.00016 22.1 1.8 1 23 1443 1465 1443 1465 0.99
51 70 0.11 1.5 9.5 1.0 1 23 1470 1492 1470 1492 0.98
52 70 1.4e-05 0.0002 21.7 1.6 1 23 1497 1519 1497 1519 0.99
53 70 0.51 7.3 7.4 1.3 1 23 1524 1546 1524 1546 0.97
54 70 6.9e-05 0.00097 19.6 2.3 1 23 1551 1573 1551 1573 0.99
55 70 0.11 1.5 9.5 1.0 1 23 1578 1600 1578 1600 0.98
56 70 1.4e-05 0.0002 21.7 1.6 1 23 1605 1627 1605 1627 0.99
57 70 5.2e-05 0.00074 20.0 3.4 1 23 1632 1654 1632 1654 0.99
58 70 1.4e-05 0.0002 21.7 1.6 1 23 1659 1681 1659 1681 0.99
59 70 1.4e-05 0.0002 21.7 1.6 1 23 1686 1708 1686 1708 0.99
60 70 1.4e-05 0.0002 21.7 1.6 1 23 1713 1735 1713 1735 0.99
61 70 1.4e-05 0.0002 21.7 1.6 1 23 1740 1762 1740 1762 0.99
62 70 1.4e-05 0.0002 21.7 1.6 1 23 1767 1789 1767 1789 0.99
63 70 0.1 1.5 9.6 2.9 1 23 1794 1816 1794 1816 0.99
64 70 6.9e-05 0.00097 19.6 2.3 1 23 1821 1843 1821 1843 0.99
65 70 0.11 1.5 9.5 1.0 1 23 1848 1870 1848 1870 0.98
66 70 0.11 1.5 9.5 1.0 1 23 1875 1897 1875 1897 0.98
67 70 1.4e-05 0.0002 21.7 1.6 1 23 1902 1924 1902 1924 0.99
68 70 0.097 1.4 9.7 0.9 1 23 1929 1951 1929 1951 0.98
69 70 2.3e-05 0.00033 21.1 1.4 1 23 1956 1978 1956 1978 0.99
70 70 2e-05 0.00028 21.3 1.3 1 23 2010 2032 2010 2032 0.99

Sequence Information

Coding Sequence
ATGGAtatctttaaaactaaaagaaatgcGGAGGCTTGCAGTTACCGCGGGTTTTGTTATCGTGTGGACCAAGTTTCAGAAAATGGAAAACGTTGGCGTTGCTTGAAGCAGGGTTGCAACGGAAAACTTTGGAGCCTTCCAAACAACACTACACCACAAGAGCGAGGAGAACATAACCACCTAGCAGATCCCGACAGTGCTGATCTGAAAAAGACTTTAAGTGAAATGAAAGACCGTGCAAAAACCGtatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaacagaacatattaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaactgtacagaaaagtaatctaaatagacatatcaaaattcatactggtgacaaatataagtgtaaagaatgtgattataagacagtatggaaaaattgtcttaatgatcatgtcaaaattcatacaggtgacaaatataaatgtaaagaatgcgattatgaaacagtatggaaaaattctctaaaggaacatgttaaaattcatacaggtgacaaatataagtgtaaagaatgcgattatgaaacagtacggaaaaattctctaaaggaacatatgaaaattcatacaggtgaaaaatataagtgtaaagaatgtgattataaaacagtatggaaaagttctctaaaggaacatgtcaaaattcatacaggtgaggaatataagtgtaaagaatgtgattataaaactgtacagaaaagtaatctaaatcaacatatcaaaattcatactggtgacaaatataagtgtaaagaatgtgattatgaaacagtatggaaaaattctctaaaggatcacgtcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattatgaaacagtatggaaaaattctctaaaggaacatgtcaaaattcatacaggtgatgaatataagtgtaaagaatgtgattttaaaactgtacgtAAAAGTAATCTGaatcaacatgtcaaaattcatactggtgacgaatacaattgtaaagaatgtgattataaaactgtacagaaaagtaatctaaatcaacataccaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgacaaatataagtgtaaagaatgcgattatgaaacagtacggaaaaattctctaaaggaacatattaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaactgtacagaaaagtaatctaaatcaacatatcaaaattcatactggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgatgaatataagtgtaaagaatgtgattataaaactgtacagaaaagtaatctaaatcaacatgtcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcatgtcaaaattcatactggtgacaaatataagtgtaaagaatgtgattataaaactgtacagaaaagtaatctaaatcaacatatcaaaattcatactggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgacgaatataagtgtaaagaatgtgattataaaactgtacggaaaagtaatctaaatcaacatatcaaaattcatactggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcacgtcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaacagtacagaaaagtaatctaaatcaacatatcaaaattcatactggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaacttttctaaaggaacatgtcaaaattcatacagatattgaatataagtgtaaagaatgtgattataaaactgtacagaaaagtaatctaaatcaacataccaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaactgtacagaaaagtaatctaaatcaacatatcaaaattcatactggtgacaaatataagtgtaaagaatgtgattataaaactgtacataaaagtaatctaaatcaacatatcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaactgtacagaaaagtaatctaaatcaacatatcaaaattcatactggtgacaaatataagtgtaaagaatgtgattataaaactgtacagaaaagtaatctaaatcaacatatcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaactgtacagaaaagtaatctaaatcaacatatcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaactgtacagaaaagtaatctaaatcaacatatcaaaattcatactggtgacaaatataagtgtaaagaatgtgattataaaactgtacagaaaagtaatctaaatcaacatatcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataatacacAGTGGAAAAGTCACTTCACagcacatataaaaattcatttagatattgaatataagtgtaaagaatgtgattataaaactgtacagaaaagtaaCCTAAATCAACAtaccaaaattcatacaggtgacgaatataagtgcaaagaatgtgattataaaacagtatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgacaaatataagtgcaaagaatgcgATTACAagacagtatggaaaaattctctaaaggatcatgtcaaaattcatactggtgacaaatataagtgtaaagaatgtgattataaaactgtacagaaaagtaatctaaatcaacatatcaaaattcatacaggtgacaaatataagtgtaaagaatgtgattataaaacagcatggaaaaattctctaaaggatcatgtcaaaattcatacaggtgatgaatataagtgtaaagaatgcaattatgaaactgtacggaaaagtaatctaaatcaacatatcaaaattcatactggtgacaaatataagtgtaacgaatgtggttataaaacagtatggaaaaattgtctaaaggattatgtcaaaattcatacacgtGACAAATAtacgtgtaaagaatgtgattataaaactgtacagaaaagtaatctaaatcaacatatcaaaattcatataggtgacaaatataagtgtaaataa
Protein Sequence
MDIFKTKRNAEACSYRGFCYRVDQVSENGKRWRCLKQGCNGKLWSLPNNTTPQERGEHNHLADPDSADLKKTLSEMKDRAKTVWKNSLKDHVKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDKYKCKECDYKTEHIKIHTGDKYKCKECDYKTVQKSNLNRHIKIHTGDKYKCKECDYKTVWKNCLNDHVKIHTGDKYKCKECDYETVWKNSLKEHVKIHTGDKYKCKECDYETVRKNSLKEHMKIHTGEKYKCKECDYKTVWKSSLKEHVKIHTGEEYKCKECDYKTVQKSNLNQHIKIHTGDKYKCKECDYETVWKNSLKDHVKIHTGDKYKCKECDYETVWKNSLKEHVKIHTGDEYKCKECDFKTVRKSNLNQHVKIHTGDEYNCKECDYKTVQKSNLNQHTKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDKYKCKECDYETVRKNSLKEHIKIHTGDKYKCKECDYKTVQKSNLNQHIKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDEYKCKECDYKTVQKSNLNQHVKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDKYKCKECDYKTVQKSNLNQHIKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDEYKCKECDYKTVRKSNLNQHIKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDKYKCKECDYKTVQKSNLNQHIKIHTGDKYKCKECDYKTVWKTFLKEHVKIHTDIEYKCKECDYKTVQKSNLNQHTKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDKYKCKECDYKTVQKSNLNQHIKIHTGDKYKCKECDYKTVHKSNLNQHIKIHTGDKYKCKECDYKTVQKSNLNQHIKIHTGDKYKCKECDYKTVQKSNLNQHIKIHTGDKYKCKECDYKTVQKSNLNQHIKIHTGDKYKCKECDYKTVQKSNLNQHIKIHTGDKYKCKECDYKTVQKSNLNQHIKIHTGDKYKCKECDYNTQWKSHFTAHIKIHLDIEYKCKECDYKTVQKSNLNQHTKIHTGDEYKCKECDYKTVWKNSLKDHVKIHTGDKYKCKECDYKTVWKNSLKDHVKIHTGDKYKCKECDYKTVQKSNLNQHIKIHTGDKYKCKECDYKTAWKNSLKDHVKIHTGDEYKCKECNYETVRKSNLNQHIKIHTGDKYKCNECGYKTVWKNCLKDYVKIHTRDKYTCKECDYKTVQKSNLNQHIKIHIGDKYKCK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-