Lyun007346.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lamprigera yunnana
Gene Symbol
-
Assembly
GCA_013368075.1
Location
JABVZV010001223.1:10926558-10938805[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 60 0.095 1.4 9.7 2.7 1 23 9 31 9 31 0.98
2 60 2.2 31 5.4 2.2 1 23 36 58 36 58 0.96
3 60 0.0032 0.045 14.3 2.5 1 23 63 85 63 85 0.98
4 60 0.00013 0.0019 18.7 1.0 1 23 90 112 90 112 0.99
5 60 0.05 0.71 10.6 0.5 1 23 117 139 117 139 0.98
6 60 6.7e-06 9.6e-05 22.7 1.1 1 23 144 166 144 166 0.99
7 60 0.095 1.4 9.7 2.7 1 23 171 193 171 193 0.98
8 60 0.0017 0.024 15.2 0.9 1 23 198 220 198 220 0.99
9 60 0.069 0.97 10.1 2.4 1 23 225 247 225 247 0.98
10 60 6.7e-06 9.6e-05 22.7 1.1 1 23 252 274 252 274 0.99
11 60 0.05 0.71 10.6 0.5 1 23 279 301 279 301 0.98
12 60 5.5e-06 7.8e-05 23.0 2.2 1 23 306 328 306 328 0.99
13 60 0.12 1.8 9.3 2.4 1 23 333 355 333 355 0.98
14 60 0.0017 0.024 15.2 0.9 1 23 360 382 360 382 0.99
15 60 0.046 0.65 10.7 1.5 1 23 387 409 387 409 0.98
16 60 1.3e-05 0.00018 21.9 0.8 1 23 414 436 414 436 0.99
17 60 0.35 4.9 7.9 0.2 1 23 441 463 441 463 0.97
18 60 6.7e-06 9.6e-05 22.7 1.1 1 23 468 490 468 490 0.99
19 60 0.00029 0.004 17.6 3.5 1 23 495 517 495 517 0.99
20 60 0.00042 0.0059 17.1 0.9 1 23 522 544 522 544 0.99
21 60 0.0031 0.045 14.4 0.5 3 23 551 571 549 571 0.97
22 60 7.9 1.1e+02 3.6 0.9 1 23 576 598 576 598 0.95
23 60 1.4e-05 0.0002 21.8 0.6 1 23 603 625 603 625 0.99
24 60 0.095 1.4 9.7 2.7 1 23 630 652 630 652 0.98
25 60 1.4e-05 0.0002 21.8 0.6 1 23 657 679 657 679 0.99
26 60 0.17 2.5 8.9 0.7 1 23 684 706 684 706 0.98
27 60 2.9e-05 0.00041 20.7 0.8 1 23 711 733 711 733 0.99
28 60 0.05 0.71 10.6 0.5 1 23 738 760 738 760 0.98
29 60 6.7e-06 9.6e-05 22.7 1.1 1 23 765 787 765 787 0.99
30 60 0.12 1.8 9.3 2.4 1 23 792 814 792 814 0.98
31 60 0.00042 0.0059 17.1 0.9 1 23 819 841 819 841 0.99
32 60 0.049 0.7 10.6 1.5 1 23 846 868 846 868 0.98
33 60 6.7e-06 9.6e-05 22.7 1.1 1 23 873 895 873 895 0.99
34 60 0.19 2.7 8.7 0.9 1 23 900 922 900 922 0.98
35 60 6.7e-06 9.6e-05 22.7 1.1 1 23 927 949 927 949 0.99
36 60 0.00029 0.004 17.6 3.5 1 23 954 976 954 976 0.99
37 60 0.00042 0.0059 17.1 0.9 1 23 981 1003 981 1003 0.99
38 60 0.00067 0.0095 16.5 0.8 1 23 1008 1030 1008 1030 0.98
39 60 7.9 1.1e+02 3.6 0.9 1 23 1035 1057 1035 1057 0.95
40 60 7.3e-05 0.001 19.5 7.1 1 23 1062 1084 1062 1084 0.99
41 60 3.4e-05 0.00049 20.5 0.9 1 23 1116 1138 1116 1138 0.99
42 60 1.4e-05 0.0002 21.8 0.6 1 23 1170 1192 1170 1192 0.99
43 60 0.19 2.7 8.7 0.9 1 23 1197 1219 1197 1219 0.98
44 60 0.007 0.099 13.3 2.6 1 23 1345 1367 1345 1367 0.98
45 60 0.24 3.5 8.4 3.1 1 23 1372 1394 1372 1394 0.98
46 60 3.1e-05 0.00043 20.7 1.2 1 23 1399 1421 1399 1421 0.99
47 60 0.3 4.2 8.1 1.9 1 23 1426 1448 1426 1448 0.97
48 60 0.00093 0.013 16.0 0.3 1 23 1453 1475 1453 1475 0.99
49 60 0.89 13 6.6 2.7 1 23 1480 1502 1480 1502 0.98
50 60 0.45 6.4 7.6 1.8 1 23 1507 1529 1507 1529 0.96
51 60 0.15 2.2 9.0 1.1 1 23 1534 1556 1534 1556 0.98
52 60 0.0002 0.0028 18.2 0.4 1 23 1561 1583 1561 1583 0.99
53 60 0.00073 0.01 16.3 0.7 1 23 1588 1610 1588 1610 0.99
54 60 0.17 2.3 8.9 0.9 1 23 1615 1637 1615 1637 0.98
55 60 0.0018 0.026 15.1 1.0 1 23 1642 1664 1642 1664 0.98
56 60 0.0058 0.082 13.5 2.0 1 23 1669 1691 1669 1691 0.99
57 60 5.9e-05 0.00084 19.8 1.4 1 23 1696 1718 1696 1718 0.99
58 60 0.19 2.7 8.7 0.9 1 23 1723 1745 1723 1745 0.98
59 60 9.8e-05 0.0014 19.1 2.6 1 23 1750 1772 1750 1772 0.99
60 60 0.037 0.53 11.0 1.3 1 23 1777 1799 1777 1799 0.99

Sequence Information

Coding Sequence
ATGagaattcacactggtgatgaatataaatgtaaggaatgtggttataaaactCCATGGAAGCATAATTTTAAGgatcatgtaaaaattcatactggtgatgaatataaatgtaaggaatgtgactacaaaacacaatGGAAACAGAGTTTTAAGgatcatgtaaaaattcatactggtgaggagtataaatgtaatgaatgtaactttaaaacagTAAGGAAATATAAGCTAAAAgagcatgtaaaaattcatactgatgacGAGTATAAATGTTATGAATGCGACTATAAAACGGTGAGAAAATATCAACTTATAGCACACATCAGACTccatagtggtgatgaatataaatgtaaggaatgcgactttaaaacaccatggaagggCAATcttaaggaacatgtaaaaatccatactggtgataagtataaatgtaatgaatgtgactataaaataTCAAGGAAAGATCAACTTAAAGTACACATGagaattcacactggtgatgaatataaatgtaaggaatgtggttataaaactCCATGGAAGCATAATTTTAAGgatcatgtaaaaattcatactggtgatgagtataaatgtaatgaatgtgactataaatcaGTGAAAAAAGCTAGACTTAAAGAACACATCAGAATccatagtggtgatgaatataaatgtaatgaatgtaactttaaaacagTAAAGAGATATAGACTAAAGgagcatgtaaaaattcatactggtgatgaatataaatgtaatgaatgtgactataaaataTCAAGGAAAGATCAACTTAAAGTACACATGagaattcacactggtgatgaatataaatgtaaggaatgcgactttaaaacaccatggaagggCAATCTTAAAGAACAtgtaaaaatccatactggtgataagtataaatgtaatgaatgtaactataaaacaacaAGGAAGGATCAACTTAAAGTACACATGagaattcacactggtgatgaatatacaTGTAAGGAATGCGGCTATAAAACTCCATGGAAGCATAATTTTAAGgatcatgtaaaaattcatactggtgatgagtataaatgtaatgaatgtgactataaatcaGTGAAAAAAGCTAGACTTAAAGAACACATCAGAATCCATAGTGGTGAAGAATATGAATGTAAGgagtgtgattttaaaacagtaaagAGATATAGACTAAAGGAGCATGTAAaagttcatactggtgatgaatataaatgtaatgaatgtgactataaaactgtgCGGAAAGATACTCTTAAAGCACACATCAGAATTCACACtgttgataaatataaatgtaagggaTGTGACTTTACAACACCATGGAAGGGCAATTTTAATGAACATGTAGAAATCCACTCTGATGataagtataaatgtaatgaatgtgactataaaataTCAAGGAAAGATCAACTTAAAGTACACATGagaattcacactggtgatgaatataaatgtaaggaatgcgGCTATACAACACCACGGAAGCATAATTTTAAGgatcatgtaaaaattcatactggtgatgagtataaatgtaatgaatgtgactataaatcaGTGAGAAAAGGTAGACTTAAAGAACACATCAGAATTCATAGTGGTGAAGAATATggatgtaaggaatgtgactacaaaacagtAAGGAAAGATAGTCTAAAGgagcatgtaaaaattcatactggtgatgagtataaatgtatagaatgtgactttaaaacgaTATGGAAGGGCAATTTTaagaaacatgtaaaaattcattctggtgatgagtataaatgtaatgaatgtgactataaaacagtgagaaaatATCAACTTATAGCACACATCAGAATccatagtggtgatgaatataaatgtaaggaatgtggttataaaactCCATGGAAGCATAATTTTAAGgatcatgtaaaaattcatactggtgatgaatataaatgtaatgaatgtgactataaaacagtgagaaaatATCAACTTATAGCACACATCagaattcacactggtgatgaatataaatgtaatgaatgtgactttaaaacaccatggaagggCAATtttaaggaacatgtaaaaattcatactggtgacgagtataaatgtaatgaatgcgactataaaacagtgagaaaatATCAACTTATAGCACACATCAGACTccatagtggtgatgaatataaatgtaaggaatgcgactttaaaacaccatggaagggCAATCTTAAAGAACAtgtaaaaatccatactggtgataagtataaatgtaatgaatgtgactataaaataTCAAGGAAAGATCAACTTAAAGTACACATGagaattcacactggtgatgaatatacaTGTAAGGAATGTGGCTATAAAACTCCATGGAAGCATAATTTTAAGgatcatgtaaaaattcatactggtgatgagtataaatgtaatgaatgtgactataaatcaGTGAGAAAAGGTAGACTTAAAGAACACATCAGAATCCATAGTGGTGAAGAATATGAATGTAAGgagtgtgattttaaaacagtaaagAGATATAGACTAAAGgagcatgtaaaaattcatactggtgatgaatataaatgtaatgaatgtgactataaaataTCAAGGAAAGATCAACTTAAAGTACACATGagaattcacactggtgatgaatataaatgtaaggaatgtgactttaaaacaccGTGGAAGGGCAATtttaaggaacatgtaaaaatccatactggtgataagtataaatgtaatgaatgtgactataaaataTCAAGGAAAGATCAACTTAAAGTACACATGagaattcacactggtgatgaatataaatgtaaggaatgcgGCTATACAACACCACGGAAGCATAATTTTAAGgatcatgtaaaaattcatactggtgatgaatataaatgtaatgaatgtgactataaatcaGTGAGAAAAGGTAGACTTAAAGAACACATCAGAATCCATAGTGGTGAAGAATATGAATGTAAGgagtgtgattttaaaacagtaagGAAAGATAGTCTAAAGgagcatgtaaaaattcatactggtgatgagtataaatgtatagaatgtgactttaaaacgaTATGGAAGGGCAATTTTaagaaacatgtaaaaattcattctggtgatgagtacaaatgtaatgaatgtgactttaaaacagcGAGAAAACATCATCTTAATCGACACATGAGAACCCATAgcggcgatgaatataagtgtaaggaaggtgactacaaaacaccatggcagcaaagtttaaagaaatatataaaaattcatactggcgatgaatataaatgtaatgaatgtgactataaaacagttagAAAATATGAACTTAAAGCACATGTCAGAATTCATAccagtgatgaatataaatgtaatgaatgtgactttaaaacaatatggaagtGCCATtttaaggaacatgtaaaaattcatactggtgacgagtataaatgtaatgaatgcgactataaaacagtgagaaaatATCAACTTATAGCACACATCAGAATccatagtggtgatgaatataaatgtaaggaatgtgactttaaaacaccGTGGAAGGGCAATtttaaggaacatgtaaaaatccatactggtgataaaCCGAAAATTCCTGCGAGAAATTCAAAAAGCTTGACAGCAGCGAAAATGAGAGCTTTGTTAGAAGCTAATAGTTTGGAAGAAGTAAGAGGTAAAGGTGATattgaagaaataaatattttgcaaaGTGTCTTTGACAATACTTTTGAAGTAGATTGTTCCGACACTAATAATGAATCTGACAGTGATGAGATTATTGCACCTGGGCTTTTTTACcttagtaaaaataaatctacCAAATGGCAGAAGAAATTTGTAGTAAATTACAGGCCTGAAGCGTTGAAAGCAGAACCGGTACATTTTGAAACAACTTTTAAATGGAAACGTGATATTCATACGGATCACATCGACACATCCAAATGTGAATATATTTGtactaaatgtaattataaaacacagcggaaacaaaatttacagactcatgtgaaaattcatagtgatgATAAGtacaagtgtaaggaatgtgactacaaaacaccatggaagcatAATTTTAAGgatcatgtaaaaattcatactggtgatgagtataaatgtaatgaatgtgactataaaacggtgAGAAAATATGAACTTAAAGCACATGTCAGAATGCATACTGGTGataagtataaatgtaatgaatgtgactataaaacattaAGGAAAAATAGGCTAAAGGAGCATGTAAAGATTCATACTGGcgatgagtataaatgtaatgattgtgactataaaacggtgAGCAAAGATAGACTTGGAGCACACATCagaattcacactggtgatgaatataaatgtaaggaatgtgactttaaaacaatatggaaggGCCATtttaaggaacatgtaaaaatccatactggtgataagtataaatgtaatgattgtaattttaaaacactaAGGAAAGCTCGGCTTAAAGCACATAACAGAATTCATAGTggcaatgaatataagtgtaaggaatgtgactacaaaacaccatggaaactaAGTTTAAAGAATCATATAAAacttcatactggtgacaagtataaatgtaatgaatgtgactataaatcaGTGAGAAAAGATAGACTTATAGCACACATCAGAATTCATAgtggtgaagaatataaatgtaaggaatgtgactttaaagcaGTGAGAAAAGATCGACTTAAAGCAcacatcagaatccatactggcgatgaatataagtgtaaggaatgcgaCTACAAAACACAATGGAAGCAGAATCTAGAGGAACATGTAAAAGTTCATACTGGcgatgagtataaatgtaatgaatgtgactataaaacattgAGAAAATATCAACTGTTAGCACACATCagaattcacactggtgatgaatataaatgtaaggaatgtgactacaaaacaataaggaaaaataGGCTAAAGgagcatgtaaaaattcatactggtgacgagtataaatgtagtaaatgtgactataaaacggtgagaaaatatcaacttttagcacacatcagaattcacactggtgatgaatataaatgtaaggaatgtgactttaaaacaccatggaagggAAATtttaaggaacatgtaaaaatccaCACTTGTGATGAGtacaaatgtaatgaatgtgactttaaaacagcAAGAAAAGATCATCTTAAAGGACACAtgagaatccatactggtgaggaatataagtgtaagcaatgtgactacaaaacaccatggcaGCAGAATTTAAAGACACATTTGAATATTCATagtggtaaaaaataa
Protein Sequence
MRIHTGDEYKCKECGYKTPWKHNFKDHVKIHTGDEYKCKECDYKTQWKQSFKDHVKIHTGEEYKCNECNFKTVRKYKLKEHVKIHTDDEYKCYECDYKTVRKYQLIAHIRLHSGDEYKCKECDFKTPWKGNLKEHVKIHTGDKYKCNECDYKISRKDQLKVHMRIHTGDEYKCKECGYKTPWKHNFKDHVKIHTGDEYKCNECDYKSVKKARLKEHIRIHSGDEYKCNECNFKTVKRYRLKEHVKIHTGDEYKCNECDYKISRKDQLKVHMRIHTGDEYKCKECDFKTPWKGNLKEHVKIHTGDKYKCNECNYKTTRKDQLKVHMRIHTGDEYTCKECGYKTPWKHNFKDHVKIHTGDEYKCNECDYKSVKKARLKEHIRIHSGEEYECKECDFKTVKRYRLKEHVKVHTGDEYKCNECDYKTVRKDTLKAHIRIHTVDKYKCKGCDFTTPWKGNFNEHVEIHSDDKYKCNECDYKISRKDQLKVHMRIHTGDEYKCKECGYTTPRKHNFKDHVKIHTGDEYKCNECDYKSVRKGRLKEHIRIHSGEEYGCKECDYKTVRKDSLKEHVKIHTGDEYKCIECDFKTIWKGNFKKHVKIHSGDEYKCNECDYKTVRKYQLIAHIRIHSGDEYKCKECGYKTPWKHNFKDHVKIHTGDEYKCNECDYKTVRKYQLIAHIRIHTGDEYKCNECDFKTPWKGNFKEHVKIHTGDEYKCNECDYKTVRKYQLIAHIRLHSGDEYKCKECDFKTPWKGNLKEHVKIHTGDKYKCNECDYKISRKDQLKVHMRIHTGDEYTCKECGYKTPWKHNFKDHVKIHTGDEYKCNECDYKSVRKGRLKEHIRIHSGEEYECKECDFKTVKRYRLKEHVKIHTGDEYKCNECDYKISRKDQLKVHMRIHTGDEYKCKECDFKTPWKGNFKEHVKIHTGDKYKCNECDYKISRKDQLKVHMRIHTGDEYKCKECGYTTPRKHNFKDHVKIHTGDEYKCNECDYKSVRKGRLKEHIRIHSGEEYECKECDFKTVRKDSLKEHVKIHTGDEYKCIECDFKTIWKGNFKKHVKIHSGDEYKCNECDFKTARKHHLNRHMRTHSGDEYKCKEGDYKTPWQQSLKKYIKIHTGDEYKCNECDYKTVRKYELKAHVRIHTSDEYKCNECDFKTIWKCHFKEHVKIHTGDEYKCNECDYKTVRKYQLIAHIRIHSGDEYKCKECDFKTPWKGNFKEHVKIHTGDKPKIPARNSKSLTAAKMRALLEANSLEEVRGKGDIEEINILQSVFDNTFEVDCSDTNNESDSDEIIAPGLFYLSKNKSTKWQKKFVVNYRPEALKAEPVHFETTFKWKRDIHTDHIDTSKCEYICTKCNYKTQRKQNLQTHVKIHSDDKYKCKECDYKTPWKHNFKDHVKIHTGDEYKCNECDYKTVRKYELKAHVRMHTGDKYKCNECDYKTLRKNRLKEHVKIHTGDEYKCNDCDYKTVSKDRLGAHIRIHTGDEYKCKECDFKTIWKGHFKEHVKIHTGDKYKCNDCNFKTLRKARLKAHNRIHSGNEYKCKECDYKTPWKLSLKNHIKLHTGDKYKCNECDYKSVRKDRLIAHIRIHSGEEYKCKECDFKAVRKDRLKAHIRIHTGDEYKCKECDYKTQWKQNLEEHVKVHTGDEYKCNECDYKTLRKYQLLAHIRIHTGDEYKCKECDYKTIRKNRLKEHVKIHTGDEYKCSKCDYKTVRKYQLLAHIRIHTGDEYKCKECDFKTPWKGNFKEHVKIHTCDEYKCNECDFKTARKDHLKGHMRIHTGEEYKCKQCDYKTPWQQNLKTHLNIHSGKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-