Lyun010042.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lamprigera yunnana
Gene Symbol
-
Assembly
GCA_013368075.1
Location
JABVZV010001875.1:4158679-4176460[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 64 0.00037 0.0052 17.3 3.0 1 23 12 34 12 34 0.99
2 64 2.9e-05 0.00042 20.7 1.5 1 23 39 61 39 61 0.99
3 64 0.033 0.47 11.1 0.8 1 23 66 88 66 88 0.98
4 64 0.023 0.32 11.6 2.5 1 23 93 115 93 115 0.98
5 64 0.00027 0.0038 17.7 1.5 1 23 120 142 120 142 0.99
6 64 0.043 0.6 10.8 0.4 1 23 147 169 147 169 0.98
7 64 0.043 0.6 10.8 0.4 1 23 174 196 174 196 0.98
8 64 3e-05 0.00043 20.7 1.1 1 23 201 223 201 223 0.99
9 64 5.4e-05 0.00076 19.9 1.4 1 23 228 250 228 250 0.99
10 64 0.012 0.17 12.5 0.8 1 23 255 277 255 277 0.98
11 64 0.0053 0.076 13.6 2.4 1 23 282 304 282 304 0.98
12 64 0.029 0.41 11.3 0.8 1 23 309 331 309 331 0.98
13 64 0.032 0.45 11.2 0.5 1 23 336 358 336 358 0.97
14 64 7.1e-05 0.001 19.5 1.5 1 23 363 385 363 385 0.99
15 64 0.00024 0.0033 17.9 1.7 1 23 426 448 426 448 0.99
16 64 0.43 6.1 7.6 1.5 1 23 453 475 453 475 0.97
17 64 0.00074 0.01 16.3 1.3 1 23 480 502 480 502 0.98
18 64 0.0037 0.053 14.1 2.2 1 23 507 529 507 529 0.97
19 64 0.00074 0.01 16.3 1.3 1 23 534 556 534 556 0.98
20 64 0.00085 0.012 16.1 1.3 1 23 561 583 561 583 0.98
21 64 0.00074 0.01 16.3 1.3 1 23 588 610 588 610 0.98
22 64 0.00079 0.011 16.2 1.9 1 23 615 637 615 637 0.97
23 64 0.098 1.4 9.7 0.8 1 23 642 664 642 664 0.98
24 64 0.098 1.4 9.7 0.8 1 23 669 691 669 691 0.98
25 64 0.029 0.41 11.3 1.1 1 23 696 718 696 718 0.98
26 64 0.00074 0.01 16.3 1.3 1 23 723 745 723 745 0.98
27 64 0.00074 0.01 16.3 1.3 1 23 750 772 750 772 0.98
28 64 4.9e-05 0.00069 20.0 1.1 1 23 777 799 777 799 0.99
29 64 0.00024 0.0033 17.9 1.7 1 23 804 826 804 826 0.99
30 64 0.00074 0.01 16.3 1.3 1 23 831 853 831 853 0.98
31 64 0.00046 0.0065 17.0 1.3 1 23 858 880 858 880 0.98
32 64 0.00027 0.0038 17.7 2.4 1 23 885 907 885 907 0.98
33 64 0.23 3.3 8.5 0.4 1 23 912 934 912 934 0.95
34 64 0.022 0.3 11.7 2.2 1 23 939 961 939 961 0.99
35 64 0.39 5.5 7.8 1.4 1 23 966 988 966 988 0.97
36 64 0.014 0.2 12.3 1.0 1 23 993 1015 993 1015 0.98
37 64 0.00085 0.012 16.1 1.3 1 23 1020 1042 1020 1042 0.98
38 64 0.014 0.2 12.3 3.1 1 23 1047 1069 1047 1069 0.98
39 64 0.00027 0.0038 17.7 1.6 1 23 1074 1096 1074 1096 0.99
40 64 0.026 0.37 11.4 1.2 1 23 1101 1123 1101 1123 0.98
41 64 0.00024 0.0033 17.9 1.7 1 23 1128 1150 1128 1150 0.99
42 64 0.00037 0.0052 17.3 1.4 1 23 1155 1177 1155 1177 0.98
43 64 0.00027 0.0038 17.7 1.6 1 23 1182 1204 1182 1204 0.99
44 64 0.00027 0.0038 17.7 1.6 1 23 1209 1231 1209 1231 0.99
45 64 0.00024 0.0033 17.9 1.7 1 23 1236 1258 1236 1258 0.99
46 64 0.00085 0.012 16.1 1.3 1 23 1263 1285 1263 1285 0.98
47 64 0.00085 0.012 16.1 1.3 1 23 1290 1312 1290 1312 0.98
48 64 0.00032 0.0046 17.5 1.4 1 23 1317 1339 1317 1339 0.98
49 64 0.00085 0.012 16.1 1.3 1 23 1344 1366 1344 1366 0.98
50 64 0.00016 0.0022 18.4 1.3 1 23 1371 1393 1371 1393 0.99
51 64 0.00037 0.0052 17.3 1.4 1 23 1398 1420 1398 1420 0.98
52 64 0.00074 0.01 16.3 1.3 1 23 1425 1447 1425 1447 0.98
53 64 0.00024 0.0033 17.9 1.7 1 23 1452 1474 1452 1474 0.99
54 64 0.00085 0.012 16.1 1.3 1 23 1479 1501 1479 1501 0.98
55 64 0.00085 0.012 16.1 1.3 1 23 1506 1528 1506 1528 0.98
56 64 0.00085 0.012 16.1 1.3 1 23 1533 1555 1533 1555 0.98
57 64 0.00024 0.0033 17.9 1.7 1 23 1560 1582 1560 1582 0.99
58 64 0.00037 0.0052 17.3 1.4 1 23 1587 1609 1587 1609 0.98
59 64 0.00011 0.0016 18.9 1.6 1 23 1614 1636 1614 1636 0.99
60 64 0.00085 0.012 16.1 1.3 1 23 1641 1663 1641 1663 0.98
61 64 0.00011 0.0016 18.9 1.6 1 23 1668 1690 1668 1690 0.99
62 64 0.00085 0.012 16.1 1.3 1 23 1695 1717 1695 1717 0.98
63 64 0.00027 0.0038 17.7 1.6 1 23 1722 1744 1722 1744 0.99
64 64 0.011 0.15 12.7 3.9 1 23 1749 1771 1749 1771 0.99

Sequence Information

Coding Sequence
atgcaacatgtcaaaattcatactggtgatgaatataagtgtaaagaatgtgattataaaacagtacagaaaggtcatctaaagcaacatgtcaaaattcatactggtgacgaatataagtgtaaagaatgtgattataaaaccgcacagaaaagtaatctaatgcaacatctcaaaattcatactggtgacgaatatacatgtaaagagtgtgattataaaacggtatggaagaGTAATATAAtgaaacatatcaaaattcatactggtgacaaatataagtgtaaagagtgtgattataaaacggtatggaaaagtcatctaaaggaacatgtcaaaattcatactggtgatgaatataagtgtaaacaatgtaattataaaacagtacagaaagGTAATCTAAtcaaacatgtcaaaattcatactggtgacaaatataagtgtaaagagtgtgattatgaaacggtatggaaaagtcttctaaaggaacatgtcaaaattcatactggtgacaaatataagtgtaaagagtgtgattatgaaacggtatggaaaagtcttctaaaggaacatgtcaaaattcacactggtgacgaatataagtgtaaagaatgtgattataaatcagtacggaaaagtaatctaatggaacatatcaaaattcatactggtgatgaatataagtgtaaagagtgtgattataaaacggtacagaaaagtaatctaatgcaacatgtcaaagttcatactggtgacaaatataagtgtaaagaatgtgattataaatcagtatggaaaagtaatctaatgcaacatgtcaaaattcatactggtgatgaatataagtgtaaagaatgtaattataaaacactacagaaaagtaatctaatgcaacatcttaaaattcatactggtgacaaatataagtgtaaagagtgtgattataaaacggtatggaaaagtcttctaaaggaacatgtcaaaattcatactggtgacgaatataagtgtatagaatgtgattataaatcagtaCGGAAAAGTAGTCTAATGgaccatgtcaaaattcatattggtgacgaatataagtgtaaagaatgtgattataaatcagtacggaaaagtaatctaatgcaacatgtcaaaattcatactggtgacaaatataagtgtaaagaatgtgattataaatcagtacggaaaaaatgtgattataaaacggtatggaaaagttatctaaaggaacatgtcaaaattcatactggtgacaaatataagtgtaaagaatgtgattataaaacagtacagaaaagttatctaaaggaacatgtcaaaattcatactggtgacaaatataattgtaaagaatgtgattataaaacggtatggaaaagttatctaatgcaacatttcaaaattcatactggtgacaaatataattgtaaagaatgtgattataaaacagtacagaaaagttatctaaaggaacatgtcaaaattcatactggtgacaaatataattgtaaagaatgtgattataaaacagtacagaaaagttatctaatgcaacatttcaaaattcatactggtgacaaatataattgtaaagaatgtgattataaaacagtacagaaaagttatctaaaggaacatgtcaaaattcatactggtgacaaatataattgtaaagaatgtgattataaaacagtacagaaaagttatctaatgcaacatgtcaaaattcatactggtgacaaatataattgtaaagaatgtgattataaaacagtacagaaaagttatctaaaggaacatgtcaaaattcatactggtgacaaatataattgtaaagaatgtgattataaaacagtacagaaaagtaatctaatgcaacatttcaaaattcatactggtgacaaatataattgtaaagaatgtgattataaaacggtatggaaaagttatctaaaggaacatgtcaaaattcatactggtgacaaatataattgtaaagaatgtgattataaaacggtatggaaaagttatctaaaggaacatgtcaaaattcatactggtgacaaatataagtgtaaagagtgtgattataaaacggtatggaaaagttatctaaaggaacatgtcaaaattcatactggtgacaaatataattgtaaagaatgtgattataaaacagtacagaaaagttatctaaaggaacatgtcaaaattcatactggtgacaaatataattgtaaagaatgtgattataaaacagtacagaaaagttatctaaaggaacatgtcaaaattcatactggtgaccgatataagtgtaaagaatgtgattataaaacagtacagaaaagtaatctaattcaacatgtcaaaattcatactggtgacaaatataagtgtaaagaatgtgattataaaacagtacagaaaagttatctaaaggaacatgtcaaaattcatactggtgacaaatataattgtaaagaatgtgattataaaacagtacagaaaagttatctaaaggaacatgtcaaaattcatactggtgacaaatataattgtaaagaatgtgattataaaacagagaggaaaaataatctaatgcaacatgtcagaattcatactggtgacaaatataagtgtaaagaatgtgattataaaacagtacagaaaagtaatctaatgcaacatttcaaaattcatactggtgacaaatatacgTGTAAAGAGtgcgattataaaacggtatggaaaagttatctaaaggaacatgttggcattcatactggtgacgcaTATAAGTGTacacaatgtgattataaaacaatatggaaaagtaatctaaaacaacataccaaaattcatacatgtgatgaatataagtgcaaagagtgtgattataaaactgtatggaaaaatagtctaaaggaacattccaaaattcatactggtgacgaatataagtgtaaagagtgtgattataaaacggtatggaaaagtcagctaaaggaacatgtcaaaattcatactggtgacaaatataattgtaaagaatgtgattataaaacagtacagaaaagttatctaatgcaacatgtcaaaattcatactggtgacaaatatacatgtaaagagtgtgactataaaacggtatggaaaagtcatctaaagaaacatgtcaaaattcatactggtgatgaatataagtgtaaagaatgtgattataaaacagtacagaaaagttatctaatgcaacatgtcaaaattcatactggtgacaaatatacatgtaaagagtgtgattataaaacggtatggaaaagaaatctaatgaaacatgtaaaaattcatattggtgacaaatataagtgtaaagaatgtgattataaaacagtacagaaaagttatctaaaggaacatgtcaaaattcatactggtgacaaatatacatgtaaagagtgtgattataaaacagtacagaaaagttatctaatgcaacatgtcaaaattcatactggtgatgaatataagtgtaaagaatgtgattataaaacagtacagaaaagttatctaatgcaacatgtcaaaattcatactggtgacaaatataagtgtaaagagtgtgattataaaacagtacagaaaagttatctaatgcaacatgtcaaaattcatacatgtgatgaatataagtgtaaagaatgtgattataaaacagtacagaaaagttatctaaaggaacatgtcaaaattcatactggtgacaaatataattgtaaagaatgtgattataaaacagtacagaaaagttatctaatgcaacatgtcaaaattcatactggtgacaaatataattgtaaagaatgtgattataaaacagtacagaaaagttatctaatgcaacatgtcaaaattcatactggtgacaaatatacatgtaaagagtgtgattataaaacagtacagaaaagttatctaaaggaacatgtcaaaattcatactggtgacaaatataattgtaaagaatgtgattataaaacagtacagaaaagttatctaatgcaacatgtcaaaattcatactggtgacaaatatacatgtaaagagtgtgattataaaacagtacagaaaagttatctaatgcaacatgtcagaattcatactggtgacaaatatacatgtaaagagtgtgattataaaacagtacagaaaagttatctaatgcaacatgtcaaaattcatactggtgacaaatataattgtaaagaatgtgattataaaacagtacagaaaagttatctaaaggaacatgtcaaaattcatactggtgacaaatataagtgtaaagaatgtgattataaaacagtacagaaaagttatctaaaggaacatgtcaaaattcatactggtgacaaatataattgtaaagaatgtgattataaaacagtacagaaaagttatctaatgcaacatgtcaaaattcatactggtgacaaatataattgtaaagaatgtgattataaaacagtacagaaaagttatctaatgcaacatgtcaaaattcatactggtgacaaatataattgtaaagaatgtgattataaaacagtacagaaaagttatctaatgcaacatgtcaaaattcatactggtgacaaatataagtgtaaagaatgtgattataaaacagtacagaaaagttatctaaaggaacatgtcaaaattcatactggtgacaaatatacatgtaaagagtgtgattataaaacagtacagaaaagttatctaatgcaacatgtcaaaattcatactggtgacaaatataagtgtaaagagtgtgattataaaacagtacagaaaagttatctaatgcaacatgtcagaattcatactggtgacaaatataattgtaaagaatgtgattataaaacagtacagaaaagttatctaatgcaacatgtcaaaattcatacatgtgatgaatataagtgtaaagagtgtgattataaaacagtacagaaaagttatctaatgcaacatgtcagaattcatactggtgacaaatataattgtaaagaatgtgattataaaacagtacagaaaagttatctaatgcaacatgtcaaaattcatactggtgacaaatataagtgtaaagagtgtgattataaaacagtacagaaaagttatctaatgcaacatgtaaaaattcatattggtgacaaatataagtgtaaagaatgtgattataaaacagtatcaaaaaaatgcctaatgcaacatgtcaaaattcatacaagtatCGATATACATgtaggtaatgaatataaatgcaaaGAATGA
Protein Sequence
MQHVKIHTGDEYKCKECDYKTVQKGHLKQHVKIHTGDEYKCKECDYKTAQKSNLMQHLKIHTGDEYTCKECDYKTVWKSNIMKHIKIHTGDKYKCKECDYKTVWKSHLKEHVKIHTGDEYKCKQCNYKTVQKGNLIKHVKIHTGDKYKCKECDYETVWKSLLKEHVKIHTGDKYKCKECDYETVWKSLLKEHVKIHTGDEYKCKECDYKSVRKSNLMEHIKIHTGDEYKCKECDYKTVQKSNLMQHVKVHTGDKYKCKECDYKSVWKSNLMQHVKIHTGDEYKCKECNYKTLQKSNLMQHLKIHTGDKYKCKECDYKTVWKSLLKEHVKIHTGDEYKCIECDYKSVRKSSLMDHVKIHIGDEYKCKECDYKSVRKSNLMQHVKIHTGDKYKCKECDYKSVRKKCDYKTVWKSYLKEHVKIHTGDKYKCKECDYKTVQKSYLKEHVKIHTGDKYNCKECDYKTVWKSYLMQHFKIHTGDKYNCKECDYKTVQKSYLKEHVKIHTGDKYNCKECDYKTVQKSYLMQHFKIHTGDKYNCKECDYKTVQKSYLKEHVKIHTGDKYNCKECDYKTVQKSYLMQHVKIHTGDKYNCKECDYKTVQKSYLKEHVKIHTGDKYNCKECDYKTVQKSNLMQHFKIHTGDKYNCKECDYKTVWKSYLKEHVKIHTGDKYNCKECDYKTVWKSYLKEHVKIHTGDKYKCKECDYKTVWKSYLKEHVKIHTGDKYNCKECDYKTVQKSYLKEHVKIHTGDKYNCKECDYKTVQKSYLKEHVKIHTGDRYKCKECDYKTVQKSNLIQHVKIHTGDKYKCKECDYKTVQKSYLKEHVKIHTGDKYNCKECDYKTVQKSYLKEHVKIHTGDKYNCKECDYKTERKNNLMQHVRIHTGDKYKCKECDYKTVQKSNLMQHFKIHTGDKYTCKECDYKTVWKSYLKEHVGIHTGDAYKCTQCDYKTIWKSNLKQHTKIHTCDEYKCKECDYKTVWKNSLKEHSKIHTGDEYKCKECDYKTVWKSQLKEHVKIHTGDKYNCKECDYKTVQKSYLMQHVKIHTGDKYTCKECDYKTVWKSHLKKHVKIHTGDEYKCKECDYKTVQKSYLMQHVKIHTGDKYTCKECDYKTVWKRNLMKHVKIHIGDKYKCKECDYKTVQKSYLKEHVKIHTGDKYTCKECDYKTVQKSYLMQHVKIHTGDEYKCKECDYKTVQKSYLMQHVKIHTGDKYKCKECDYKTVQKSYLMQHVKIHTCDEYKCKECDYKTVQKSYLKEHVKIHTGDKYNCKECDYKTVQKSYLMQHVKIHTGDKYNCKECDYKTVQKSYLMQHVKIHTGDKYTCKECDYKTVQKSYLKEHVKIHTGDKYNCKECDYKTVQKSYLMQHVKIHTGDKYTCKECDYKTVQKSYLMQHVRIHTGDKYTCKECDYKTVQKSYLMQHVKIHTGDKYNCKECDYKTVQKSYLKEHVKIHTGDKYKCKECDYKTVQKSYLKEHVKIHTGDKYNCKECDYKTVQKSYLMQHVKIHTGDKYNCKECDYKTVQKSYLMQHVKIHTGDKYNCKECDYKTVQKSYLMQHVKIHTGDKYKCKECDYKTVQKSYLKEHVKIHTGDKYTCKECDYKTVQKSYLMQHVKIHTGDKYKCKECDYKTVQKSYLMQHVRIHTGDKYNCKECDYKTVQKSYLMQHVKIHTCDEYKCKECDYKTVQKSYLMQHVRIHTGDKYNCKECDYKTVQKSYLMQHVKIHTGDKYKCKECDYKTVQKSYLMQHVKIHIGDKYKCKECDYKTVSKKCLMQHVKIHTSIDIHVGNEYKCKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-