Lyun017817.1
Basic Information
- Insect
- Lamprigera yunnana
- Gene Symbol
- Eip74EF
- Assembly
- GCA_013368075.1
- Location
- JABVZV010002408.1:670320-711342[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-07 0.00014 21.6 0.0 3 37 460 495 458 500 0.88
Sequence Information
- Coding Sequence
- ATGTTACTGCCAGGATACACGACGACTCCTTCGCGTAGTCCAACGcccgaaataaaaaaagagaataataTTACAGACAACGATTGTGTGCCATTAGATTTAAGTGTAAATAGTGGACGTTTGAGTCCGGGACTTCGAGATTCTGGTACCGAGAGTGACGACTCCGGTGGACGATGTTCTCCAGAAGGGGGAGATTGCAAAGCTTACAAGAAAAGTTTGATGAAACGTTATCtagacAACAGCGAAATGGGTTATGGACCATTAAGAATCTCGGAATCTCCTCCGCCCGCGAAGCATCATAGGTCTGAAAGTTCCAGGGCACTTTTACACGGTATTCTTTCGGGACAACATCCAGGCTTGCACCATGCACACGCTCTTATTACTGCGCATCGTACTTCTGCTTATACAACGACAACGACAGGTTCACTGCCACCTAGCCCAGCAGATTCAGGTGTTTCCGACGTAGATAGTTCTTCCAGTGGTCACGCGTCGACTGACGAGCTCAAATCGCGTTTGCAACCACCGGGCCTCGGACCACATTCACCTTTAGGTTTTCCACCAAATCAGCAGTTCCTTACACCTTACCATTACCATCCGTCGGGACACGGACACGGACACCCTCACAGAGGGCACATGTCGCATCAGTCTCCGTATCCGCATCGGCCGCAACTGCCTGACAGTTACACCACCTACATATCGTCACTGCAACAACATCAAGCTCAACAAAATTCCAACTTACAAGGATACCATCACAACAATAGCCATTCTCCATTCACAGCACCTTCTGCACCTTCACCACCGAGGGGATATGCCATTCCGACATCGGTAATTCAGGCAGCTACTTCAAGCGTTAATGATGAGCTCTCTTATATGTTAGATCTTGGTTTTCCCCCTCGAAAACTGAAAAAGGTTAAGAAACCAAAACCGGGCGAACATGGATCAGTAAAGAGAAAAAGTCGCGAAGGATCGACAACATATTTATGGGAATTTTTGCTCAAGTTATTGCAGGATAGAGAATACTGTCCTAGATATATTAAGTGGACGAATAGAGAAAAAGGTGTTTTCAAATTGGTAGATTCAAAAGCCGTTTCTCGATTGTGGGGTTTACACAAGAACAAACCAGATATGAATTATGAAACTATGGGTCGAGCTTTGAGATATTATTATCAACGAGGTATTCTTGCCAAGGTAGATGGTCAGAGATTAGTTTACCAGTTTGTTGAAGTTCCAaaagatattgttgaaattgATTGTACAGGATGGAGTATGCTGTTGATACCATATTTTCAACGCTGGATTCAAACTTTAATATATACTCTATGcATGCCTCGTAAACTAAAGTCTACAtctacaaagaaaaggaaaatatgGGATAAGGGCGCAATGCAACGAGCCATAGTAGCTGTAAAAGGAGGAGAAATGGGTACGTTATTGCCTTCACAAACGTTTGGTGTTCCGAGAACGACTTTGCAACGTTCTGCTAAAACGACTGATATGACTCCTACTGAATCAGTTCAACTTAAATTTGGCAGAAAACCTGTACTATTGTAA
- Protein Sequence
- MLLPGYTTTPSRSPTPEIKKENNITDNDCVPLDLSVNSGRLSPGLRDSGTESDDSGGRCSPEGGDCKAYKKSLMKRYLDNSEMGYGPLRISESPPPAKHHRSESSRALLHGILSGQHPGLHHAHALITAHRTSAYTTTTTGSLPPSPADSGVSDVDSSSSGHASTDELKSRLQPPGLGPHSPLGFPPNQQFLTPYHYHPSGHGHGHPHRGHMSHQSPYPHRPQLPDSYTTYISSLQQHQAQQNSNLQGYHHNNSHSPFTAPSAPSPPRGYAIPTSVIQAATSSVNDELSYMLDLGFPPRKLKKVKKPKPGEHGSVKRKSREGSTTYLWEFLLKLLQDREYCPRYIKWTNREKGVFKLVDSKAVSRLWGLHKNKPDMNYETMGRALRYYYQRGILAKVDGQRLVYQFVEVPKDIVEIDCTGWSMLLIPYFQRWIQTLIYTLCMPRKLKSTSTKKRKIWDKGAMQRAIVAVKGGEMGTLLPSQTFGVPRTTLQRSAKTTDMTPTESVQLKFGRKPVLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00152051;
- 90% Identity
- iTF_01284051;
- 80% Identity
- iTF_00853744;