Lyun009711.1
Basic Information
- Insect
- Lamprigera yunnana
- Gene Symbol
- -
- Assembly
- GCA_013368075.1
- Location
- JABVZV010001778.1:8954073-8958804[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.4e-07 0.00068 19.4 0.0 8 38 88 118 82 123 0.79 2 2 7.4e-07 0.00068 19.4 0.0 8 38 167 197 161 202 0.79
Sequence Information
- Coding Sequence
- ATGGAGTGTAATGTCCTGGAATACAAAGACACAAGAGATTCTTATAGAAATGAAAAAACACCGGATAGATATATGCTGTATAAGCAAAccaaaaggaaaggaaagggaAAGATTAAGTGTGGAGACTACCAACTGGTGTATAGCAGAAAAGAAAAGCATGAAAGTGCCGCAGCAGGTGTAGgtCTGGTTGCTAACAAAATACTTTGCAAGAAgcttactaataaaataataggcAGAACTTCTTCGGAAGTTATGCGAATTGCTATTCATGGTGTTGTTATAATGGGTTTATTTCTGAAAAGAGCAAGTTTAGTCTATAACATACCCCGAACCACATTAAGACgttattataaaaaatgcaaaaacaagGAAGAAGATATCGATTGGAACTCTTCTATACTAGAAGGAGCGCCAAGGTTAACTCCAAACTATAGCGAAAATAAGATATTCACCGATCGTAAAGAACGCCCtcaAACTTCTTCGGAAGTTATGCGAATTGCTATTCATGGTGTTGTTATAATGGGTTTATTTCTGAAAAGAGCAAGTTTAGTCTATAACATACCCCGAACCACATTAAGACgttattataaaaaatgcaaaaacaagGAAGAAGAGATCAATTGGAACTCTTCTATACTAGAAGGAGCGCCAAGGTTAACTCCAAACTATAGCGAAAATAAGATATTCACCGATCGTAAAGAACGCCCtcagtaa
- Protein Sequence
- MECNVLEYKDTRDSYRNEKTPDRYMLYKQTKRKGKGKIKCGDYQLVYSRKEKHESAAAGVGLVANKILCKKLTNKIIGRTSSEVMRIAIHGVVIMGLFLKRASLVYNIPRTTLRRYYKKCKNKEEDIDWNSSILEGAPRLTPNYSENKIFTDRKERPQTSSEVMRIAIHGVVIMGLFLKRASLVYNIPRTTLRRYYKKCKNKEEEINWNSSILEGAPRLTPNYSENKIFTDRKERPQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -