Basic Information

Insect: Lamprigera yunnana
Gene Symbol: bab1
Assembly: GCA_013368075.1
Location: JABVZV010002630.1:221767-232048[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.3e-14 2.2e-11 43.4 0.1 3 45 367 409 365 409 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.3e-14	2.2e-11	43.4	0.1	3	45	367	409	365	409	0.92

Sequence Information

Coding Sequence: ATGGGGAGCACGGCACAACAGTATTGCCTGCGGTGGAACAATCATCGCTCAAATTTATTAACAGTTTTCGACGAACTCCTACAAAATGAGGCCTTTACAGATGTGACGCTTGCCTGCGATGGAGGAAGTCCCATTAAGTGCCATAAAATCGTTCTTGCGGCGTGTTCGCCGTACTTTCAAAGTCTATTCGCCAGTTTGTCGTGTAAACACCCCGTTGTTGTTTTAAAAGATGTTAAGTATGGCGAAATTAAAGCCATATTGGAGTATATGTATAGAGGTGAAGTGAACGTTGCTCAAGATCAATTAGCCGCATTGCTTAAGGTTGCGGAGGCTCTTAAGGTTAAgggtttggtggaagaaagtcgaGGTACCGATCACCCGAGTCTGCACCCCAGAGATGACGATCCGATGTCGCGACACTCTCCTACAAATATTAGCACCTCCACGGCGAATATTCAAACAACCCACGGCAGCAATAGTAATACCTCGCCGACGCACTCTACTAGCGGCATGTCTTATACAAAAAACCCCTATCACATATACGGAAAATCTCCGAACATAGAAAGAACTTCTCGAATGAACTTACCTATGTGGGCCGTGCCTGGTTTACCATTAAGTCATCATCCTTCGCCCGTTTCTTCCCAGAATCATCCGCACTCAGCAGCAACGGCGGCCGCAGCTATGTTAAGCAGTTGTTACGAAGCAGCTAATAACGATTTATCTCccctgaaaagaaaaaaactttctaGTTTACTGATGAACAGAGACACGCCAATTTTACGAACGGTTCTCGGGCAAGGTCAAATGGAAACCTCGCAACCTGTTAGTTTAGTCTGCCACACCGATAGTATcgaaaatttacattcaaacgAATCTGATGATCGCTCAGAAAAACATATAAAAAATGAACCCTTGGAAGATGCTCAATCGCCGTATACGGATCTAACAATTatagaagatgaagaaaaactGAAGCTCGGAATTCCATCTTCTTCCCCCCTATCGTATCCAAGCGAAATGCGGAATGTTTCGTCTGGAATAGCTACGTACGTCCCTTCTCAAAAACCCGAATGGAAACGTTATAAACAGTACACACGTAACGATATCATGTCAGCAATCGACGCCGTTCGAAATGGCATGAGTGCGTTGCAAGCTGCGCGAAAGTACGGAGTGCCATCACGAACTCTTTAcgacaaagttaaaaaaatgggaaTAACTACCAGCCGACCTTTTAAGAGAGGTTCCAATGGAAGCAACGCTTGTTTTCCGTACGGACTGAGTGGTACTAATTCGCCGTACAGTGGTCATCTGTCCGAAACCGAAGATCCAGGTATGAATAACCATTCTGCCCTTTTAGAAGCCAGTAGTTTTTTGCAACACGCTTTGGACGGTAGAGGCAACGACGAAAGAGACGCGTTAGCAGCTATGGCGGCGGCGGCAGTTGCGCACGCTGCCGTGACGAGTCATTCGACTAGTCCGCAAAATCAAGGCATGCCTCGAAGTCCTAGTCCTTCTTGTATGATGAAATACATGCATCACAATAGTATGACCTCCTCCCCCGCTCCTGGTAGTGAACATCATCACAGTGAGACAAATGGTAGTTCCGAACGAGAAAGAGACGACGACGAAGATCAAGTTGAAGATTTATCAGTAGGAAGAAAACAAGAATCGAGAGTTATCATGCCGCCCATGAATCAAGTTTccactattataaaaaaagaagaaatgtttAAAGAAGTTTTGAGGGAAGAAATTCGGCAAGAGttaatatctaatatgttgtcaactttgcgcggaaaacatcttcacgctcaagcgcgcgaaatggcttttaatgtgcaccaatggataaaatctcaaaatgaaaatcaatgtataaaggaaattaaagaaaaagtgtcaagagctactgaaGTATCcataagaaccatcgaaaggattattaaagaaggaagcacctcacCTGAAGCTGAGAccaataaaagatttaaaagtcctgaaaaaaaaacgaaatcgcgtgtgtaccgtgaccgcacttga
Protein Sequence: MGSTAQQYCLRWNNHRSNLLTVFDELLQNEAFTDVTLACDGGSPIKCHKIVLAACSPYFQSLFASLSCKHPVVVLKDVKYGEIKAILEYMYRGEVNVAQDQLAALLKVAEALKVKGLVEESRGTDHPSLHPRDDDPMSRHSPTNISTSTANIQTTHGSNSNTSPTHSTSGMSYTKNPYHIYGKSPNIERTSRMNLPMWAVPGLPLSHHPSPVSSQNHPHSAATAAAAMLSSCYEAANNDLSPLKRKKLSSLLMNRDTPILRTVLGQGQMETSQPVSLVCHTDSIENLHSNESDDRSEKHIKNEPLEDAQSPYTDLTIIEDEEKLKLGIPSSSPLSYPSEMRNVSSGIATYVPSQKPEWKRYKQYTRNDIMSAIDAVRNGMSALQAARKYGVPSRTLYDKVKKMGITTSRPFKRGSNGSNACFPYGLSGTNSPYSGHLSETEDPGMNNHSALLEASSFLQHALDGRGNDERDALAAMAAAAVAHAAVTSHSTSPQNQGMPRSPSPSCMMKYMHHNSMTSSPAPGSEHHHSETNGSSERERDDDEDQVEDLSVGRKQESRVIMPPMNQVSTIIKKEEMFKEVLREEIRQELISNMLSTLRGKHLHAQAREMAFNVHQWIKSQNENQCIKEIKEKVSRATEVSIRTIERIIKEGSTSPEAETNKRFKSPEKKTKSRVYRDRT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00838716;
90% Identity: iTF_00003685;
80% Identity: iTF_00854137;