Lhir013489.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lagria hirta
Gene Symbol
nfxl1
Assembly
GCA_947359425.1
Location
OX375800.1:16205419-16209666[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2 3e+04 -5.1 1.9 15 19 162 166 162 166 0.85
2 20 0.09 1.4e+03 0.2 0.4 4 10 197 203 196 203 0.96
3 20 3.1e-08 0.00046 20.9 17.0 1 19 211 228 211 228 0.99
4 20 5.2e-09 7.8e-05 23.3 13.6 1 19 264 282 256 282 0.87
5 20 0.71 1.1e+04 -2.7 0.7 5 10 306 311 306 311 0.94
6 20 1.1e-08 0.00016 22.3 9.2 1 19 317 335 317 335 0.99
7 20 1.3 2e+04 -3.5 1.0 5 10 359 364 359 364 0.86
8 20 1.6e-07 0.0023 18.6 11.6 1 18 370 387 370 388 0.97
9 20 1.1 1.6e+04 -3.2 0.2 1 4 397 400 397 401 0.87
10 20 0.00019 2.8 8.8 14.8 1 18 422 439 422 440 0.94
11 20 3.5e-09 5.2e-05 23.9 9.3 1 18 449 466 449 467 0.97
12 20 2 3e+04 -4.3 1.1 5 10 495 500 495 500 0.83
13 20 0.0014 21 6.0 3.2 10 19 516 525 514 525 0.92
14 20 0.011 1.7e+02 3.1 5.9 3 12 536 545 535 545 0.87
15 20 1.7 2.5e+04 -3.9 0.6 9 12 595 598 595 598 0.77
16 20 2 3e+04 -4.3 1.1 6 10 604 608 603 608 0.64
17 20 4.2e-05 0.63 10.8 6.4 1 12 614 625 614 625 0.97
18 20 0.87 1.3e+04 -3.0 0.7 6 10 642 646 641 646 0.86
19 20 1.3e-05 0.19 12.5 19.3 3 19 655 671 654 671 0.92
20 20 0.00038 5.7 7.8 11.2 1 16 714 728 714 734 0.92

Sequence Information

Coding Sequence
ATGAACAGTCGAAAGAAAACATCGAACCCCTGGTCTCAAAATGTAGCTAAGAAGAAATCTCCTGCACCTGTCCGCCAAAGTGCTCCAACTCCTGCAGAAGTTCGATTTAAAGAGGCTCATGGAAAATTGCAGGCAGCGGTGCAGAAACACATTAAAGATTATGAGTCGTCTTCAGAGGAAGAGGAGCTTGAATCAGAAAATATTATTGGGCAAATTGTGAGGAAATACACCGAAACCGGGGTGACAGACGAATCGTTGGGTCGCACGAAAATATTCTTACAAGATTCCTTTACAAGTGGCACTTTCACATGCCTCATATGTATTTCTAGAATTAAACGAGAAGCGGCGGTTTGGAGTTGTTTCGAATGTTATTGTGTTTTTCATCTGAATTGCATTCAAAGATGGTCAAAAGATAGCATTTTCCAACAAAAACAAATTTTAGAAAGCCCTGTTCAGATTAGAAAAGTTACATTATCATGGGGTTGTCCTAAATGTAGAAGTGATTATAAACTAGACGATATTCCAGAGAAATATTTATGCTTTTGCAAAAAGACTGTTGAGCCGAAGCTGCAAACATTTTTAGCACCACATTCATGTGGAGAATTATGTGGGAAAGAATTGAAGCCAAATTGTGGACATAAATGTTTATTGTTATGCCATCCAGGTCCATGTCCTCCTTGCCCTGTTACTATTAGCATTACTTGTTACTGTGGAGACAAGCCACCAGTTACACAACGCTGCAGCAATAAAGAATGGTCTTGTGGAGGTCGCTGTGGAAAGTCATTATTATGTGAAAAACACACCTGCTCTGAAATCTGTCATGCTGGAGATTGCCCTCCTTGCCCCAAAAAAAGTTTACAGAAATGTATGTGTAAGAATCAACAAAAACTAAGAGATTGTGCAGCTTCTTTATGGACTTGTGACAAGATATGCAACAAACCACTCGAGTGTGGTAATCACAACTGCGCAATCGTTTGTCATGCAGGAGTTTGCGATTCATGTCCTTTAGCAAAGCTAAGATTTTGCCCTTGTGGAAAAACAAAATACCAATTGCCTTGCACTGAAGAAACACCGACGTGTCCAGATACATGTGATAAATTACTTGAATGTGGTCTTCATACTTGTAATCAGCGTTGTCACAAGGATGCTTGTGGTCCATGTCTGGAAACAGTAGTTAAATCATGCAAATGCGGTTTACATTCCAAAGAAATTCAATGCTATAAAAGCTACTCGTGCGAAACAAAATGTAAAAGAATGAAAGACTGCAACAAACATCCCTGCAATAAAAAGTGTTGTGACGGAAACTGTCTTCCATGTGATAAACCCTGTGGACGGACTTTAAATTGTAGCAATCATAAATGTAGCTCCGTATGTCACCGTGGAATGTGCTACCCTTGTAACCAGCTTGAAACTGTGAGCTGTCGTTGTGGAGCCACTACCATTAATGTACCTTGTGGTAGAAAACATCGAACTAAACCACCAAAATGTCTGAAACCATGCACAATACCTCCAGACTGTCATCATCCGCAACGAGAATTCCATCGATGTCATTTTGGTGATTGCGCTTCTTGCAAGCAGATTTGTAATAAGTCACGCTTATCATGTACACATTCATGTCCAGCCCCCTGTCACTCAGCTGTCTTAGTAAAAATTGAAGCTCAGAAACCATCCATGCCTTGGGAACAAACAAAACCACAAATTGAAAAAAGGGAATTATTGTGCCCGAATTGTGTTGTACCCCTTCCAGTTACCTGTTTAGGTGGTCACGAAACAAGCAATTGGCCTTGTCACAAAGCAGTGCCTTCAAGCTGCCATCGATTATGTGGGCGTTTATTAGATTGTGGAAATCATACATGCTCTCTGGAATGTCATTCAGTAGAATCACCTTTGGATGATATTAAAGCTGATAAGAATTGCGAAGCCTGTGAAAATCCCTGTTCAAAACCGCGTCCGGAAGGCTGTACTCACAACTGCCCGAAACAGTGCCACCCTGGACCATGCCCCCCTTGTAAGCACATTCTTCGCATTAAATGTCACTGCGGTCTAACTCAACCATACGTAACCTGTTCCGATTGGTTAACTTTAGAAAAACGTGTGAATATCCAAAGCTGTGGCAACCAATGCCCTAAAAACTTTGCCTGTGGGCACAAATGTCGTACAAATTGTCACGTTGGAGTATGTCCTAATCCAGAGTTATGTAAACGTAAGGTTAAATTCACATGTAAATGTAAACGGATTAAGCGGGAATTTCCTTGTGACGCTGTTCGGAATAATTTAGCTAAAGTCGAATGCGATGATATTTGTTTTCAAAAGAAGGAAGAGGATAGGAAACAGCAAGAATTAGTCGATGCACAAAAAAAACGGGAGGAAGAATTAAAGAATGAAAAAGAACTAGCCAAATATAAACGCATATTTGAAGGGAAGAAGAAAAATAGAGATAGAAAACAACATGAAGAAGAACAAGAAATTAAGTTTATACAGAAGTATTGGGTGTTAATAAGTTCTTTTATAATAAGTAGAGATCCAAATGCCTTAAATATATATTTATACCGGGGTTTATACTACAATGTTTTACAACTTAGTGCAAATCATTCTCTCGTAAATGGTGGGTAA
Protein Sequence
MNSRKKTSNPWSQNVAKKKSPAPVRQSAPTPAEVRFKEAHGKLQAAVQKHIKDYESSSEEEELESENIIGQIVRKYTETGVTDESLGRTKIFLQDSFTSGTFTCLICISRIKREAAVWSCFECYCVFHLNCIQRWSKDSIFQQKQILESPVQIRKVTLSWGCPKCRSDYKLDDIPEKYLCFCKKTVEPKLQTFLAPHSCGELCGKELKPNCGHKCLLLCHPGPCPPCPVTISITCYCGDKPPVTQRCSNKEWSCGGRCGKSLLCEKHTCSEICHAGDCPPCPKKSLQKCMCKNQQKLRDCAASLWTCDKICNKPLECGNHNCAIVCHAGVCDSCPLAKLRFCPCGKTKYQLPCTEETPTCPDTCDKLLECGLHTCNQRCHKDACGPCLETVVKSCKCGLHSKEIQCYKSYSCETKCKRMKDCNKHPCNKKCCDGNCLPCDKPCGRTLNCSNHKCSSVCHRGMCYPCNQLETVSCRCGATTINVPCGRKHRTKPPKCLKPCTIPPDCHHPQREFHRCHFGDCASCKQICNKSRLSCTHSCPAPCHSAVLVKIEAQKPSMPWEQTKPQIEKRELLCPNCVVPLPVTCLGGHETSNWPCHKAVPSSCHRLCGRLLDCGNHTCSLECHSVESPLDDIKADKNCEACENPCSKPRPEGCTHNCPKQCHPGPCPPCKHILRIKCHCGLTQPYVTCSDWLTLEKRVNIQSCGNQCPKNFACGHKCRTNCHVGVCPNPELCKRKVKFTCKCKRIKREFPCDAVRNNLAKVECDDICFQKKEEDRKQQELVDAQKKREEELKNEKELAKYKRIFEGKKKNRDRKQHEEEQEIKFIQKYWVLISSFIISRDPNALNIYLYRGLYYNVLQLSANHSLVNGG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
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80% Identity
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