Lhir017806.1
Basic Information
- Insect
- Lagria hirta
- Gene Symbol
- pnr
- Assembly
- GCA_947359425.1
- Location
- OX375794.1:8246332-8273276[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.7e-18 4.2e-14 52.6 2.3 1 35 292 325 292 326 0.97 2 2 2.7e-17 1.1e-13 51.2 6.1 1 35 349 382 349 383 0.97
Sequence Information
- Coding Sequence
- ATGGAGCAGCAAAATTCGCCAGTACCTGTCGACATCAAGCCAAAAATCGAGCGAGAAAAAGAAGCTGAACCACCTACTCAGAGTGTTATTATTCGAAGACAAGTAATAACAACAGCCGGTACTATTGAAGAAAACATTGAAGAAAGTAAAATCGAACAGATTGCTGGAGAGGAAGTTGTAAATACGTCTGAATCACCGGAGGAGCAAGTCATTTCAGAAGAGGGGACAACAATTGTTCAGTATGAAGAACAAACGACACCTGAACAGAACTATGATGAAAGTCAATCGGTGTATGTGACAGAAGCTGTTATCACAACAGAAGGGTATCCATCTCAAGGAGATTATCATCAACAACCTCAAACAGTAGCTTATACAACAACATTAGACATGCAACAGCCTAACGCTATTACGATTGAGCCTACGGAATATGCCCAGCTTGAAAGTGTAAACAACCCTCATTACAATGGTCCATACGAAAATGAAACAGCTCAATTTCTACATCATCAGTACCCAAATCAATATGATGGTTATAGTGATGACAAGGCAGGTATTATCAACCCTCAGACAGCATTATATCGAGATACCGATCCAAATCTTGGATCATCAAGATATCAACCTTATGATGAACCGAACCAAAGTGCAAATGGTCAACAGGTGACAATAATAAGTGCCAATGGAGGAGGAACGTATCAATTTACACCAGCACCAGCTTCTGCTTGGCCCAATTCTGGAAGCAGTGAATATAATTACCAACAAGGCAACATGCCTCTCCATCAACCTGACAGTACACAGTACTCGCACATTGGCTGGAATAACAATTCATCAATTGAGGATTCAACGAGAGCACAAATTCGTGAGGTACATATCAAAGAATGCGTGAATTGCGGTGCCAGTGTGACACCTCTTTGGCGTAGAGATGGTACCGGTCACTATCTCTGTAATGCTTGCGGTCTGTATAACAAAATTAATGGTGTTAATAGACCACCAGTGAGGCCTACCAAAAAACCACAGGCGCAAGCTGGGCCTAGGAGAAATGGAGTCACATGTGCAAATTGTAAAACAGGAACTACAACACTTTGGAGACGAAATAATCAAGGAGAGCCAGTTTGCAACGCCTGTGGATTATACTTCAAACTACATAATGTGAACCGACCAATGAGCATGAAGAAAGAAGGAATTCAGACGAGAAAACGAAGACCAAAGAATTCGGGATCGCATAGCCAAGGCAGCCCCAGCACTAGTCAAGTTTTGCTGCCAAATAGAATGTTACATCATTCCTCGTATTATTCACCCAATATGCAAGCAGAAATTGCCGCTGACCAATACCAATTACCGATAGGAGCTGCCACCTTCCAAAACCAATACCACCAACGTCTTCCTGGCGCTGAACAGCTGACAAGACAGATTCCTAATGTAACACCATTAGAGCCCATTCAGTTGGGTGTGAACGATGAGCAAGCTAGTGTAATTACTTCTACGTCACAAAATGCCAGGTATCGTCATCAGGACGAGGATGATGACAGCCAACCCAATGCCTGA
- Protein Sequence
- MEQQNSPVPVDIKPKIEREKEAEPPTQSVIIRRQVITTAGTIEENIEESKIEQIAGEEVVNTSESPEEQVISEEGTTIVQYEEQTTPEQNYDESQSVYVTEAVITTEGYPSQGDYHQQPQTVAYTTTLDMQQPNAITIEPTEYAQLESVNNPHYNGPYENETAQFLHHQYPNQYDGYSDDKAGIINPQTALYRDTDPNLGSSRYQPYDEPNQSANGQQVTIISANGGGTYQFTPAPASAWPNSGSSEYNYQQGNMPLHQPDSTQYSHIGWNNNSSIEDSTRAQIREVHIKECVNCGASVTPLWRRDGTGHYLCNACGLYNKINGVNRPPVRPTKKPQAQAGPRRNGVTCANCKTGTTTLWRRNNQGEPVCNACGLYFKLHNVNRPMSMKKEGIQTRKRRPKNSGSHSQGSPSTSQVLLPNRMLHHSSYYSPNMQAEIAADQYQLPIGAATFQNQYHQRLPGAEQLTRQIPNVTPLEPIQLGVNDEQASVITSTSQNARYRHQDEDDDSQPNA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -