Lhir017804.1
Basic Information
- Insect
- Lagria hirta
- Gene Symbol
- gata5-a
- Assembly
- GCA_947359425.1
- Location
- OX375794.1:8184732-8218837[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.3 9.8e+03 -3.0 0.1 8 17 15 24 13 27 0.72 2 3 3e-18 1.3e-14 54.2 2.7 1 34 122 154 122 156 0.97 3 3 4e-18 1.7e-14 53.8 4.5 1 35 176 209 176 210 0.98
Sequence Information
- Coding Sequence
- ATGCCATACTATGGAACAGGATCCCCCGAATTATCATCACAATCTACCCAACTATGGACATCAGGAATCAACTCAAATCAGGGATTACCTCTGGGAGAAGAATACCCCAAAGTGTCGTCATCAACAAGTTTACCTGCTTTCAATCGTTTATCTACTCCTCTTCACCACACAAATCACAGACATGTGCCCTATACAGTACCTAACCAATCGTACGCTGATTGGCCGTATGCTGAACCGGCTGGTACTCTTCAGTATAACATTTTAAGTACCGGAGGTGGCAGGAATCGACAGCTTTCTGCTTCGCAATCATTGACGGCAACTATAGATCCTCGTACAACCGAATATTTTACCGAAGGACGAGAATGTGTGAATTGTGGTGCAATCGACACCCCTTTATGGAGAAGAGATGGTACTGGTCATTACCTGTGCAATGCTTGTGGTCTTTACCATAAGATGAACGGAATGAACCGACCACTCGTCAAGCAGCCTCGTAGATTGTCTGCATCTCGCCGCGTTGGGCTAACCTGCACTAATTGCCGTACCAACATGACTTCTCTCTGGAGGAGAAACAGTGTTGGTGAGCCTGTCTGCAATGCTTGCGGACTCTATTATAAACTCCATGGCGTCAACCGGCCCCTAGCTATGAAAAAAGATAGCATCCAGACCAGAAAAAGAAAACCAAAGGGTAGCAAAGATGCAACCAGAGCTACTCTTGCAAATAATTTGGAAACAACAATAAATAACATAAAACTTGAGCAAAACTTGCCAGCTGTAAAAGTAGAACATTCACCATTAGACAACTACAACGATTTGAGATCTGTGGCAAATCTCACTCATATTCAACACAGTGGTGGTGCGAATTACGGATACAGTAACCAATCACATCAGAGGATGTCGCCGTATTCATCTCAAGCATCACAACTAACCAACAATTATTTTGAAATGCTGCAACAACAGCAACCTAGCCCTAGTTCACCTTCCACTACGTCGCCAAGTCCGAATTCTCCTCTTCTTGTGAATAACAATAACAACAACAATGTGAAAGTTATTATAAATGGAGAAAATCTGGAGCGAGCTACCGTAGTGTCTCTATCATCATAA
- Protein Sequence
- MPYYGTGSPELSSQSTQLWTSGINSNQGLPLGEEYPKVSSSTSLPAFNRLSTPLHHTNHRHVPYTVPNQSYADWPYAEPAGTLQYNILSTGGGRNRQLSASQSLTATIDPRTTEYFTEGRECVNCGAIDTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRVGLTCTNCRTNMTSLWRRNSVGEPVCNACGLYYKLHGVNRPLAMKKDSIQTRKRKPKGSKDATRATLANNLETTINNIKLEQNLPAVKVEHSPLDNYNDLRSVANLTHIQHSGGANYGYSNQSHQRMSPYSSQASQLTNNYFEMLQQQQPSPSSPSTTSPSPNSPLLVNNNNNNNVKVIINGENLERATVVSLSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -