Lhir026795.1
Basic Information
- Insect
- Lagria hirta
- Gene Symbol
- MAZ
- Assembly
- GCA_947359425.1
- Location
- OX375797.1:27189055-27190592[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.0033 0.17 13.1 2.2 1 23 159 183 159 183 0.93 2 10 0.0009 0.045 14.9 2.0 1 23 215 237 215 237 0.98 3 10 6.1e-06 0.00031 21.7 0.3 1 23 243 265 243 265 0.98 4 10 7.4e-05 0.0037 18.3 3.2 1 23 273 295 273 295 0.98 5 10 0.046 2.3 9.5 0.0 1 23 313 335 313 335 0.94 6 10 3.4e-06 0.00017 22.6 1.8 1 23 340 362 340 362 0.98 7 10 4e-06 0.0002 22.3 4.3 1 23 368 390 368 390 0.97 8 10 4e-05 0.002 19.2 5.6 1 23 396 418 396 418 0.99 9 10 3.9e-07 2e-05 25.5 0.2 1 23 424 446 424 446 0.98 10 10 3e-05 0.0015 19.6 1.0 1 20 452 471 452 474 0.94
Sequence Information
- Coding Sequence
- ATGTCAATTGAAGATTCTACACCTGTGGTAAAAGCGATAACAGTAGGCGATTTTGATAAAATATGCAGGTTATGTTTGGGAGAGGAAGATGTTACTTGTCTTTCGGGCTCAATTTTTGAAGATATTACAGCAGCAGATCTACTAGAATATTGTTTTTCCACAAAAATTAATGAGGAGGATGTTATGCCACAAAATATCTGTAGCGATTGCCTTGCCGAATTGAGTAGATTGTATGGATTTAAAAAGCAATGTGAGGAAAATGAGGCTATTTTGGAGGCTTTACTGAATCAATCAACGGAGAATGGAAATGATTCTGAAATTCTGAAGATTGAAGTCATTGATGATGACGATTATAAATCAACGGAAAATACAATAGATGATATTTCACTTAAAAACGAATTGGAGGCTGTTGATTCAGAGAAGATTTATATCTATTCGGCGAAAGCAAGAAACGGTTTAGTACAAAGCCAAGAGTTCAAATGTACTACTTGTCAGAAAAGTTATCCAACATTAAAGGAAGTCACAGAGCATAAACGGCGGTTAAAACATGCTGAATATCGTCTAGTTAAATGTGAATATTGTAGGAAATTAATAACCTGTAAAATGTTATCGGTTCATGTAAAATGTCACGGAGAGAAAAAGTATGAATGTGATATATGTCATCAAAAATTTGCGATTGGTAATAATCTAAAGCGTCACAAAATGAGGCATACCGATGAGCGACCATATGTGTGTGCAAAATGTGGCAAACGCTTCATACAGCGTGTCTCTTTGTTGGCTCACGAAAAAACTCACGAGACGGATCGTTCAAAAACGTACAATTGTCAATTTTGTGATCGGGTTTTTAGCCGATCGTGTCGCCTAGCGAACCACATGAGGGGCCATAGAGGCGTTATCGACCACGAAAAATTGGAAGATTATAAAACTGGGGAGCTCTACTTATGCGAAATTTGCTCGGCTGTATTTCAGACCGCGCCAATGTTTAAAATACATTTAGCCGAGCATGCAGCAAAAAAATTTAATTGTGACATTTGCTACAAATCGTTTAAATCGTTATTTCTACTGAAAGCCCATTTGAGAACGCATACTGGGGAAAAGCCATTTACGTGTTCCACATGCGGCAAATCTTTTGCACATAGTAGTAATTTTAAGACACATAGGACTATCCACACAGGCGAAAGGCCATACAAATGCTCTTATTGTCCATTAAGATTCCGACAAGATCCACATTTGAAGCATCACTTGAGGACCCACACCGGAGAGAAGCCCTTTCAATGCCCTATATGTGAGAAGACCTTTGCTTTTAAAGGCAATCTAACAGTACATGAAAGAATTCATACAGGGTTTAAGCCCTATGTTTGTACAATTTGTAATAGGGGATTTTATGATTCGAGCAGCTTGAAGAAACATAGATGGTCTCATGGACCAATTCATTCCATTGCAAATGTAGAAGCGATCTATGAAGAATGTGTTTTAATTGAATAA
- Protein Sequence
- MSIEDSTPVVKAITVGDFDKICRLCLGEEDVTCLSGSIFEDITAADLLEYCFSTKINEEDVMPQNICSDCLAELSRLYGFKKQCEENEAILEALLNQSTENGNDSEILKIEVIDDDDYKSTENTIDDISLKNELEAVDSEKIYIYSAKARNGLVQSQEFKCTTCQKSYPTLKEVTEHKRRLKHAEYRLVKCEYCRKLITCKMLSVHVKCHGEKKYECDICHQKFAIGNNLKRHKMRHTDERPYVCAKCGKRFIQRVSLLAHEKTHETDRSKTYNCQFCDRVFSRSCRLANHMRGHRGVIDHEKLEDYKTGELYLCEICSAVFQTAPMFKIHLAEHAAKKFNCDICYKSFKSLFLLKAHLRTHTGEKPFTCSTCGKSFAHSSNFKTHRTIHTGERPYKCSYCPLRFRQDPHLKHHLRTHTGEKPFQCPICEKTFAFKGNLTVHERIHTGFKPYVCTICNRGFYDSSSLKKHRWSHGPIHSIANVEAIYEECVLIE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -