Lhir004796.1
Basic Information
- Insect
- Lagria hirta
- Gene Symbol
- Mblk-1
- Assembly
- GCA_947359425.1
- Location
- OX375796.1:2843184-2853492[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.1e-18 1.2e-14 54.4 0.0 1 44 31 75 31 76 0.94 2 2 1.1e-18 1.9e-15 57.0 0.0 1 43 375 418 375 420 0.95
Sequence Information
- Coding Sequence
- ATGATGATAAATCCCCATCTAGTTGATAATTTCAGTTTTGATTCCAGAGCGAAACCTAGGATGTCGGCTGTAGCTGGTAGGAGAACATACACAGAAGATGAACTCCAAGCAGCTTTGAGAGACATCCAATCCGGAAAATTAGGAACTAGAAGAGCAGCTGTGATCTATGGAATACCAAGATCGACGCTGAGAAATAAAGTCTATAAGCTGGCTCTAGAACGAGAACGAGAATCGCATTTGAATAGTTCAGTGCCGTTGAAGCTCGAAGAAGAGGAAGTTATGGAGGATGAAAAGGAATTATCTGGTGCTGAAGAGGAGAAAGAAGTGGAGAAAGCTTTACAAGCCCCTCTTTGTGATATTTTAAGGTTTTCCAATGTGGATCTACCCCCAGAAGCTTTAAAGGCAATTCTCCAGAAAAATAAAGATGGAAGCGAACCTTGGGCGGGTTTGGAACACAGTGAAATTGGACCTTACATCCAGAATCTTTTGTTAGCTTCACAAAATCTTCTCGCTAATCACAAATCGATAGATGGCCATCCATCTAATAATATAATGCCCGAGTTTATGAAAAGGATGCTAAACGATGATCATGGTGGAAAAAATAATGGAGATAATGATAAACTGACAAGGCCGAGTCCGTCAAATTCCGTTATAAATAAACAACCTAAATCAGAATCAGATATGGAAACAGATGAAACACCGTCGAATGTGATACTAAAAATTCCGTCCTTCAAACCGACGTCAAGCAAGAACGGATGCGACATATTCCGAACTACACCTGAAACGGGAAGTATGGTATCTCCCCCCGTAACTAGCGAATCTAATTCTCCTCCAATCCTCCCCAATAAACAACCTATAACGATCAAAGATGTTAAAGATGTAATCGCGCAGAGCATCAGCCAGAAATTCCAGCAAAATCTAGAACCATCACGAAGGCCTTCCATATTGGAAATGGATTTTAAACGAGGAGGTTTTACACCACCTTTAACATCTCCCATTTCTGTTATCAAAACACAAGATCTACGACCCTACCAGCCTCCCCCAAAACCACAACATCAAAATCCTATGCCGTCTACAGGGGGTAAAGGTACTCGACCAAAACGAGGCAAGTACCGCAATTATGACCGGGATAGTCTAGTGGAGGCGGTCAGAGCGGTGCAAAGAGGAGAAATGTCTGTACATCGAGCTGGCTCATACTATGGCGTTCCACATTCAACTCTAGAATACAAAGTCAAAGAGCGACATCTAATGAGACCCCGAAAACGCGATCCAAAGCCTAATCCCGTCGACGAAAAAATTGCCAGTTTAAAGCAAAACGACATTCGTGTCAGTCAAGACAAATTGAAAGCGGCTCCAATGATGAAACCGCCCCAAAAATATCCACCAACCTCACCAAACGGAATGAAACTTCCGATCTTCGAACCTGGGATGGCCCCCATTCCAGGCTACAACCCGCCACCATTCCCATTCTGGCCCCATCCAGGATTCCACCACATCCCTCCTCTCGATTATGGAAGAAATCCAGGATCGCCTTTTGCACCGAATCCAGAATTTTTCGCATCGCAAATGATGCAAAAGTTACAAGAGGAATCTGCCAGACAACCTAATAATGCGCCGGCGCTTGCGAAAAGTGCCAGACAAATTGCTGAATCGCTCCTGGACGGCACGGGGTCGAATGGTAGTTTCCTGGATGGGATTATAAGGTCAAGTCTGGAGTCTGGGGTTCCACACGCTGACGATAAATCCCTCAAGGAGGAGAAGATCATCGGGGTCGAGAACATGTCCAATAAGGCTCTTCTGGATCAACTCTGCAGGAACAGCAGGCTGACGCCGCTTTCGAAACCGTCTGGAACGGCCGAAACGAATAGCTCCGGAGATGAGTCTCTCAACTATGTTAGTGGAGCGTCGAATTCGAAGGACCACCAGTCGGATTCTTCGCCCCCACGTTATGACGGCACTGAAATGCTCCAAACGATCGAATTGTCGAACGATTCAAACGAATCATCAGATAAAAGGCCACCAAAAGAAGAATCATTATCATCAGCGACGGCGACGACGCCGCCTCGGATCTACCTGAAGAAAGATCTGGCGAATCCAGACAACCTCCAGCCTGAAATGCTGATGCGCTTCCGGGACGTCATCTTGCCCGATATGGAGCGCAACGGCGTCGGAGTAGAAGGTATGACAGGAGGAAGTGCCTCTGATAATGACGCGCCTCAAGACTGA
- Protein Sequence
- MMINPHLVDNFSFDSRAKPRMSAVAGRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALERERESHLNSSVPLKLEEEEVMEDEKELSGAEEEKEVEKALQAPLCDILRFSNVDLPPEALKAILQKNKDGSEPWAGLEHSEIGPYIQNLLLASQNLLANHKSIDGHPSNNIMPEFMKRMLNDDHGGKNNGDNDKLTRPSPSNSVINKQPKSESDMETDETPSNVILKIPSFKPTSSKNGCDIFRTTPETGSMVSPPVTSESNSPPILPNKQPITIKDVKDVIAQSISQKFQQNLEPSRRPSILEMDFKRGGFTPPLTSPISVIKTQDLRPYQPPPKPQHQNPMPSTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPNPVDEKIASLKQNDIRVSQDKLKAAPMMKPPQKYPPTSPNGMKLPIFEPGMAPIPGYNPPPFPFWPHPGFHHIPPLDYGRNPGSPFAPNPEFFASQMMQKLQEESARQPNNAPALAKSARQIAESLLDGTGSNGSFLDGIIRSSLESGVPHADDKSLKEEKIIGVENMSNKALLDQLCRNSRLTPLSKPSGTAETNSSGDESLNYVSGASNSKDHQSDSSPPRYDGTEMLQTIELSNDSNESSDKRPPKEESLSSATATTPPRIYLKKDLANPDNLQPEMLMRFRDVILPDMERNGVGVEGMTGGSASDNDAPQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00167586;
- 90% Identity
- -
- 80% Identity
- -