Lhir028443.1
Basic Information
- Insect
- Lagria hirta
- Gene Symbol
- ct
- Assembly
- GCA_947359425.1
- Location
- OX375802.1:15548579-15576959[+]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.6e-27 3.9e-23 82.0 0.0 2 72 348 419 347 424 0.95 2 3 1.1e-32 1.6e-28 99.2 0.0 2 77 726 802 725 804 0.96 3 3 1.2e-30 1.8e-26 92.7 0.0 3 75 936 1009 934 1013 0.95
Sequence Information
- Coding Sequence
- ATGGCGGCCATTGCACGCATAATTGCTCCATCTCGCATACTCAATCCGAAGTTCTGTCTTAAATCTAGCATTAGGCATCACTTCGGGGATTCCCCTTTATTTCCTCCACCACCTGAAATACGTGATTTGCTTTCGATCAATCAATTAGTTGAAGAAGTACAAAGACTACAGAGCACAATATCTAAACTCAAAGAAACCTCTATCACACAAATCTCTAGGCTAGAAGACCAATTAGAACAGAAAAGACAAATCATCGTCCGGCTAGAGGCCCAACTAGACCTCCAGCGGGACTATGAAGACATGAAGCGGGAAATCAGTATTTTAAGGCCGGATCTTCCAAATCTTCCCGAATCAACAAAATCCATAGACTTACTTCTAGAAAAATCGAAAAGCCTCCAACAAAGCGAAAACAGGGTCAAAACGCCAACACAAGAGGTTGAAGGGGTTGCAAATCCACCATCAACGGAGGCGCTTTCTCCTTTGTCCCCTCCAGCAACCTTGCCTCGTCCTTTCCAGAACGTAGAAACCTTTGGTAGCATGTTAGGCGAAGAGATCGTAGCTAATTGGCGTCGTAGGATCGAGCATAATAATCGTCTAATATCCCGATCACCCTCTCTAGATGCAAAAACGCCGACAACAATCCTGGATTTTGCGTCGAGTACACCAAATACTATTAACGAAAAATCAACGGCATCGACACCGCAACCTTCCGACCAACAGCTTCCCCAAACGCCGCCGGGGGAGCCAATCACCCTCAACGGCAACCCAAAGAGTCCAGAGGACAACAATAACCACCACGTCAGTAACAATAATATCCCTATGGCCACCATGTGTGCTGTGAATAACTTCTTCAAGGGAGAAGAAACGCTCAAAAGTCCGTACAGGTTCGAAGACCACAGGTCGCCGTTTCGATTTGCTGAAGATCTCGGAATGGCCCCTGGTTCGATGGTAGGAAGATTGGGCGAGAGTCTGATCCCCAAAGGAGATCCAATGGAAGCCAGACTTCAGGAAATGCTACGCTACAATATGGACAAATACGCTTCACAAAACCTGGACACACTTCACATATCCCGAAGGGTTCGAGAGCTATTATCGATACATAACATCGGACAGCGATTGTTCGCAAAATACATTCTGGGACTGTCCCAAGGAACAGTGTCCGAGCTTCTGTCCAAACCCAAACCTTGGGACAAACTCACGGAGAAAGGACGGGATAGCTATAGGAAGATGCATGGGTGGGCCTGCGATGAACAGGCCATCCTGCTCCTGAAATCGCTCATACCAAAGAAAGGCAAAGATTCAGGAATGCCAACATTCGGCCGTCCAGAAAATGAATTTACCGATGAACGGATAGCACATATTCTTAGCGAAGCAAGTCAGATTCAACAGTTAAAGTCACATCATACCGAAGATAGTCATAGTAATGATGACTCGCAATCGCCTCACAACCAATGCCTCAGTCCCTTTTCAAAGGATTCGTCCCAAAACCGGCGACTGAAGAAATACGAAAACGATGACATTCCACAGGAAAAAGTAGTCCGGATTTATCAAGAAGAACTGGCAAAGTTGATGGGAAGAAGAATGGATGAAATGAGAAATCCGAGGGAACATTTTCCTGGTATGTTTTTCCCTCAATTATTTAGCGGTGGTCAAATGGATAGAACTCAAGAAGAAATCAGAATGGCTCTAGATGCTTATCATCGAGAAATAGTGAAATTGAACCAAACCAATCCAGGTCAAATGCCTAATTTAGGATTATTGGCACTTCAACAGCAAGCGCTTGTACATCATCAAGCAAATGGTGGAGTTCAGGATTTATCTTTACCAAAAGAGAAAAAGATTTGCAATGGAGAGGACAAAGATCAATCAGATATTAAAGATGAAGCTTTGAGACATTCTGGTAGTGCGTTTAGTTTAGTCCGCCCAAAAATTGAACCTGGTTCCCAGCCTTCGAGCGGTTCAACGGCTTCTAGTCCTTTGGGAAACTCTATTCTACCACCTGCAATGACTCCAAATGACGAATTCTCTAATTCGGCAGTTGCAAGCCCCCTTCAAAGAATGGCTTCAATTACAAATTCATTAATTTCACAACCTCCATCTCAACCTCATCATTCATCGTCACAAAGACCCCTAAAAGCCGTGTTACCTCCAATAACTCAACAGCAATTTGATCAGTACAATAACCTAAACACAGAAGACATTGTGAAAAAAGTGAAAGAACAGCTTAGCCAATACAGTATAAGCCAAAGACTTTTCGGTGAATCCGTGTTGGGATTATCACAAGGATCTGTCAGTGATCTCTTGGCAAGACCCAAACCTTGGCATATGTTGACGCAGAAAGGCCGCGAACCTTTCATCCGAATGAAAATGTTTCTAGAAGACGATAACGCTGTCCACAAACTGGTAGCCAGCCAATACAAAATCGCCCCAGAAAAACTCATGAGAACTGGAGGCTATGGAGGTGCTGGCCCTATAATCGGAAAACCCATGCCTCCAACGCCGAAAATGCTTAGCGAAGCTGCTGGCTTAATCAACAAAATGCAAGAAACGCAAAGTTTGCTCCCGCCATCGCTACAGCTAGGGCCACCTTCACTAAATCAAAATCCGCCACCGCCTCCAATGCTACTGACACCTCCAGGTGTACCGCCACACCATGCCATCAATCTACCGACACCTGATCATCTGAAAAAATCAAATCCGAGTCCGCACGCGATTCCACATTCTCCCATGGGGCCACACCATCAGTCTTTGCGGAATATGCACCAGCATATGTCGCCGAGTGTCTACGAAATGGCGGCGCTCACCCAAGATTTGGACACGCAAGTCATCACGACAAAGATTAAAGAAGCGCTTCTTGCCAATAACATAGGACAAAAAATTTTTGGTGAAGCCGTTCTCGGTTTATCGCAAGGCTCCGTCAGTGAACTCCTGTCCAAGCCCAAACCCTGGCACATGCTAAGCATCAAAGGTCGGGAGCCATTCATTCGCATGCAGTTATGGCTGAACGACGCCCACAACATTGACCGACTGCAGGCCCTCAAAAACGAGCGTCGCGAGGCCAACAAGCGGCGTCGTTCATCCGGTCCCGGGGCTCATGATAACAGCTCCGATACCTCCTCAAATGACACATCCGAGTTCTACCATTCCAATTCTCCTGGGCCTGGTCCAGGGCCAACAAAGAAGCAACGTGTGCTGTTTTCCGAAGAACAAAAAGAAGCACTGCGGCTGGCTTTTACTTTAGATCCCTACCCCAATGTGGCTACTATTGAATTTTTGGCATCCGAATTGGGTTTGTCTAGTAGAACCATTACAAATTGGTTCCATAATCATCGGATGAGGTTAAAGCAGCAAGTGCCACATGGAATATCCTCTGATATTCCAGTCAGAGACCAGTCGGGTGCACAAGGACCATTTGACCCTGTTCATTTTAGACTGTTGTTAAACCAAAGACTTTTAGAGCTATCAAAAGAGCGAATGGGGTTGAGTGGGGTTCCACTGCCTTATCCGCCGTATTTAGCTGCGAATACCAATCTTGCCGCATTGATAAGTCGCGGGCTTTTGCCAAATGAAATGGACTTGACGGCGTTGAATAACGCTGTTAAGGAAGAAATGAGTGGTCTAGATCTATCGATGGGAGGACTAAAACGAGAACCTGGCGATTTCGATGATGATGATGACGTTGAAAGTAATGTAGGATCAGAAGACTCAAATTTATCAACGAGTAGTTTGATGAAATCGGAACCCAAAGAAACTCCATCAGTGAATCAAAGTCGGAGTTCAAGAAGGAAACCGGCGGCGCCTCAATGGGTGAATCCGGAGTGGCAGGATACGGATAAGGAGAAACAAACTGGAGATGAGGTTATAATAAATGGAGTGTGTGTTATGCAAACGGAAGACTATGGGAGAAGAAATTCAGAAGAAACAGTGCGGGTTGAACCAACGCCAGTGATGGACAGGTTTGAGGATGACCAAAGTGATACTTCTTCTATTAGTAATGACAATGAACCACAAAATCAAAATGAAGACAAAGACAAAAATGAAGAAAATAGAAGTGTGAATAATGATGAAAATGTAAAAGATGAGAAACATGAAACGGAAGATGAAAGGTGGGATTATTGA
- Protein Sequence
- MAAIARIIAPSRILNPKFCLKSSIRHHFGDSPLFPPPPEIRDLLSINQLVEEVQRLQSTISKLKETSITQISRLEDQLEQKRQIIVRLEAQLDLQRDYEDMKREISILRPDLPNLPESTKSIDLLLEKSKSLQQSENRVKTPTQEVEGVANPPSTEALSPLSPPATLPRPFQNVETFGSMLGEEIVANWRRRIEHNNRLISRSPSLDAKTPTTILDFASSTPNTINEKSTASTPQPSDQQLPQTPPGEPITLNGNPKSPEDNNNHHVSNNNIPMATMCAVNNFFKGEETLKSPYRFEDHRSPFRFAEDLGMAPGSMVGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHISRRVRELLSIHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDEQAILLLKSLIPKKGKDSGMPTFGRPENEFTDERIAHILSEASQIQQLKSHHTEDSHSNDDSQSPHNQCLSPFSKDSSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRMDEMRNPREHFPGMFFPQLFSGGQMDRTQEEIRMALDAYHREIVKLNQTNPGQMPNLGLLALQQQALVHHQANGGVQDLSLPKEKKICNGEDKDQSDIKDEALRHSGSAFSLVRPKIEPGSQPSSGSTASSPLGNSILPPAMTPNDEFSNSAVASPLQRMASITNSLISQPPSQPHHSSSQRPLKAVLPPITQQQFDQYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGAGPIIGKPMPPTPKMLSEAAGLINKMQETQSLLPPSLQLGPPSLNQNPPPPPMLLTPPGVPPHHAINLPTPDHLKKSNPSPHAIPHSPMGPHHQSLRNMHQHMSPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNIDRLQALKNERREANKRRRSSGPGAHDNSSDTSSNDTSEFYHSNSPGPGPGPTKKQRVLFSEEQKEALRLAFTLDPYPNVATIEFLASELGLSSRTITNWFHNHRMRLKQQVPHGISSDIPVRDQSGAQGPFDPVHFRLLLNQRLLELSKERMGLSGVPLPYPPYLAANTNLAALISRGLLPNEMDLTALNNAVKEEMSGLDLSMGGLKREPGDFDDDDDVESNVGSEDSNLSTSSLMKSEPKETPSVNQSRSSRRKPAAPQWVNPEWQDTDKEKQTGDEVIINGVCVMQTEDYGRRNSEETVRVEPTPVMDRFEDDQSDTSSISNDNEPQNQNEDKDKNEENRSVNNDENVKDEKHETEDERWDY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00870456;
- 90% Identity
- iTF_00852571;
- 80% Identity
- iTF_00852571;