Lhir000826.1
Basic Information
- Insect
- Lagria hirta
- Gene Symbol
- ARID5B
- Assembly
- GCA_947359425.1
- Location
- OX375798.1:10051124-10067627[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.74 3.2e+03 -0.7 0.0 37 52 139 154 136 175 0.85 2 2 3.6e-26 1.5e-22 80.5 0.0 1 89 247 333 247 333 0.94
Sequence Information
- Coding Sequence
- ATGGAAAAAGAAAGAAAGAGATATTACGAAAGAAATAGATTCAACGAAGAGGAGATTGAGCAAAAAAGAGAAGCGAATCAAAGGGATGAAGTATTGGCTATATCTGAAAAAGTCGTTCTCAGGGTGGAGGACCTGATAACGTGGATTACAGTAGATGCAGAATGGACATGGGGTAGATTAGCTAAGTGTGAAACGGACGTCAAAAACCCACCGAAAGAGGAAGAGCACAAAAACACGATCTCTTCGTTAACTGAAAGCTCGTTGGATTTTTCCGATGTTGAAAAGGAAAAGACTGCATCAGATTGCTCGAGTGACCAGTCAGGTCCTCCGGTAATAATCCTCAGCTACCCTCGGTATTGTCGATACCGGGCTATGATGCGAAGACTCCAAGGAGTGGAAAATGAGTTTTTGAAGTACAAAATTGTTAACGCTTTAGGAGGTTTTGTTGCATGCACCAAAAATACACGAATCTTATTTTGCAAAGATACTTTTGATTATCCGGAACTTGAGGGCCACGAACTTTTGTGCAATCATCTTGCTCCGAAATTGAAAGGAAGACCACGGGGAAGGCGAAAAAAGCGAAGTGTGTCTCCTGGATCGGAAAGTAACGAATCGGAATCGTCAGGATTAAATGTTTTTAATTCTGCTAAGGAAAATATTATAGTAGAGGAGAGCAAAAATCGTTTAAGATGTGATAGTAATCAGTTGCGACGTAGTACGCGAACTATTGAGACAAGTGAAAATAAGGAGTTTCTTAAAGAACTAATGGTATTTATGAAAACAAATTACACACCTATTGGAAAAATACCTTCTTTAGGCTACAAAGAATTGGATTTATATTCATTTTATCATAGAGTACAAAAGTTAGGAGGTTATGATTCAGTAACTGCAAATCGCTTATGGAAAAATATTTTCGATGACTTGAGCGGTCACACAAGTAGTACGAGTGCAACTACGGTTATAAGAAGACACTACGAAAGGTTTCTTTTACCCTACGAGCGCCATATTAAAGGAGAAGAGTACAAACCACTACCAATTTCAGAAAGACGAAGACTGAAAAGCAAAACTGGCGGAAGCAGTACAAGTGACGCTGAAACTAGTGAAAGCACGTCTAGAAGTGGCAATAGTACACCAATACCGCAAGCTGTTAGTATATTTCCAATAACTCCAACTACACCTACGGAAAATAAGGAATTCAATTTGCAAGTAAAGTCTGAGGCGAAGATGTCATCTTTACGAAGTGTACGCGTAAAACCCGAACGACAAAAAGACAGATTGAGTATTGAAAAAATGACAATTGTGCAAAACGATAATAATAATAGTGAATCAAGTGTAGGTGACGTTACAATTGAAGTGAAAGAATGCGATGATAAAGTTGTGGAATGTGAGAAAGTTGAAGTGAAAGAATGCGAAGTGGACATTATACCAATATTACCAATTATTAAACCAGAACCAATAAGTGCTAAAGTGGAAATTCCTGAGAAGGATGCTGAACCGGTAACATCGGCTGTAGCTCCAGTAGCGCAGAAATTGACTATTGAAAAATCTCATTTACCAGTTGAAGAGAAAGAAGACATCTCTATTATTAAAACCGGTGATACGCCAACGGAAAGGGAAAGCAACAGCCCAGAAGTAATTGAGGTGCCATATAAACCTAAGAGTCCTGAAATAATAGATTTAGAATCGGGGAGTTATTCTACAAAAACTTTACATCAACCGTTTTTGCATGAAGTTAAAAAACGGAAATTGGACATTTTAAAAGAAGGTGGATTGGAAGTTACGCCGGTTAGAAGTTTTGCTCCACCACTTTTAAAAGATGCTCGCCCTTCTGTCATTCAACCAACTGGTGCCACCAGTATTCAAAAAACATCGAAAGCAAGCATAATTCAAATGCCACCTCCACTCATCGGTTCTGTTCCAGCCAAACGCTTACAATTGCCGCTGTCTCAAACTCCAAATAATCCAATGAAGTCTGAAAGTAAACTACCGTCTTCAAAATCGTGTTCATATGTTAATGGAAGTGGCCCCCCCAAAGTTCTTCAATCAAAATCAATCTATTCATATTCAGAAAAAATGGTGTATGGAAATCCCAAAGACTATATGCTGCCTCCTACACCGATTGTGCATACTCCAAAATCTATAGGCTCAAGACAAAGTGCAGATATTTTAGACTTGACAGTCACCAGTCCACAAAAACCTGTTGTAGAAATAGTAAAAATTCCAAATCCTATCCCTCTACAAGCGTCTTTCAATTCATCAGCCCGACTTCCACATAAACCTATTGCCACTTCTCCAATGTTAGAAAGGTCACGAATAGGTTCTAATTTAGAAATAACTTTAGTTGGTTCCAACTCGGGATCGAGTAAAGCGTCAATTCCTAGTGTTCCTACGCCTTCGCGCTACACTCTTCCAGCAATGCCTCATCCTAGACATCATGCGTATCATAGACCTTTAGAGAAATATCCTCAAAAACGATCCACTTCTGATTATTATCCTAATCATAAATTACCCCGGATGCATCATGAAAATGGTAGTAAATATCCAAAAATGATTCCTTCAATGCCAGTTCATCCAGTTTTACCTCGAAGAGATAAAATCGATCTCACAACTCCTTCTCATTCTTATAACAATCCACGAATTCCACCTGTGATTAAAGCAGATATTCCAAAACCTACCGCTCAAATTCTACCAACAGTTCCTCCTAAGCACTTAACAACACCTCCAGTTTCATTCCATCCATCGGCGTATCTGTCGCATTTATATGATAATACCAAAAACCTAGCACCATATATGTCATTTTTGGACCCTGTTTATTTAACAGCGATGCAGAATCTATATTCTCATACTCAACTGACAGGTGGTCATCCAATACCACCAATTCCCTCCCCAGAGCAGCTAAAATTCTACACCGATTTGATGGTGCACAATTCAAGGATGAATAATTTTCCATTCCCAATTGGAACGGACGGGAATCCTTCCAATAATAATTTTAAAAAACCATAG
- Protein Sequence
- MEKERKRYYERNRFNEEEIEQKREANQRDEVLAISEKVVLRVEDLITWITVDAEWTWGRLAKCETDVKNPPKEEEHKNTISSLTESSLDFSDVEKEKTASDCSSDQSGPPVIILSYPRYCRYRAMMRRLQGVENEFLKYKIVNALGGFVACTKNTRILFCKDTFDYPELEGHELLCNHLAPKLKGRPRGRRKKRSVSPGSESNESESSGLNVFNSAKENIIVEESKNRLRCDSNQLRRSTRTIETSENKEFLKELMVFMKTNYTPIGKIPSLGYKELDLYSFYHRVQKLGGYDSVTANRLWKNIFDDLSGHTSSTSATTVIRRHYERFLLPYERHIKGEEYKPLPISERRRLKSKTGGSSTSDAETSESTSRSGNSTPIPQAVSIFPITPTTPTENKEFNLQVKSEAKMSSLRSVRVKPERQKDRLSIEKMTIVQNDNNNSESSVGDVTIEVKECDDKVVECEKVEVKECEVDIIPILPIIKPEPISAKVEIPEKDAEPVTSAVAPVAQKLTIEKSHLPVEEKEDISIIKTGDTPTERESNSPEVIEVPYKPKSPEIIDLESGSYSTKTLHQPFLHEVKKRKLDILKEGGLEVTPVRSFAPPLLKDARPSVIQPTGATSIQKTSKASIIQMPPPLIGSVPAKRLQLPLSQTPNNPMKSESKLPSSKSCSYVNGSGPPKVLQSKSIYSYSEKMVYGNPKDYMLPPTPIVHTPKSIGSRQSADILDLTVTSPQKPVVEIVKIPNPIPLQASFNSSARLPHKPIATSPMLERSRIGSNLEITLVGSNSGSSKASIPSVPTPSRYTLPAMPHPRHHAYHRPLEKYPQKRSTSDYYPNHKLPRMHHENGSKYPKMIPSMPVHPVLPRRDKIDLTTPSHSYNNPRIPPVIKADIPKPTAQILPTVPPKHLTTPPVSFHPSAYLSHLYDNTKNLAPYMSFLDPVYLTAMQNLYSHTQLTGGHPIPPIPSPEQLKFYTDLMVHNSRMNNFPFPIGTDGNPSNNNFKKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -