Lwla013706.1
Basic Information
- Insect
- Lacanobia wlatinum
- Gene Symbol
- pnr
- Assembly
- GCA_947578705.1
- Location
- OX388027.1:30777001-30789909[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.095 3.4e+02 1.6 2.1 3 10 96 103 95 104 0.87 2 4 0.095 3.4e+02 1.6 2.1 3 10 181 188 180 189 0.87 3 4 1.1e-17 3.9e-14 52.6 3.8 1 35 312 345 312 346 0.97 4 4 6.5e-18 2.4e-14 53.3 6.0 1 34 366 398 366 400 0.98
Sequence Information
- Coding Sequence
- ATGTTCGGCGGCGGCGGCGGCGTGGGCGCGGGCTACAACGGTGGCGGCGGCGACTGCGCCGACGGCTACGGGTTGGGCTACGTAGCGGGCGGCGGCCGCCTGCAGCAGTACGCCGCGCACTTCGCGCCGCACCAGAACGTGTGGCACCACCACCACCCCACGCACCACGACACCTACGGTGAGTACACACTACCTACTCGTCTGCCTGCAGCAGTACGCCGCGCACTTCGCGCCGCACCAGAACGTGTGGCACCACCACCACCCCACGCTCCACGACACCTACGAACGTGTGGCACCACCACCACCCCACGCACCACGACACCTACGGTGAGTACACACTACCTACTCGTCCGCCTGCAGCAGTACGCCGCACACTTCGCGCCGCACCAGAACGTGTGGCACCACCGCCACCCCACGCACCACGACACCTACGGTGAGTACACACTACCTACTCGTCTGCCTGCAGCAGTACGCCGCGCACTACGCGCCGCACCAGAACGTGTGGCACCACCACCACCCCACGCACCACGACACCTACGAACGTGTGGCACCACCACCACCCCACGCACCACGACACCTACGGTGAGTACACACTACCTACTCGTCCGCCTGCAGCAGTACGCCGCACACTTCGCGCCGCACCAGAACGTGTGGCACCACCACCACCCCACGCACCACGACACCTATGATGAGTACACACCCCCTGCAGCAACTATTCATACTTCATGGGGCTATTCTTGTTTCTTCTATGAGAGGCTCGGTGCTTCCTCGGGCTCTCCAGCGAGCGGCGGCGGCGTGGGCGGCGTGGGCGGCGTGGCGGGGGGACTGTACTCGCAGAACATGGTGATGGGCTCGTGGTGCGCGCCCTACGATGCGCTGCAGAGACCCACCGCTTACGATGGCGTGCTGGAGATGTACGAGGAGGGGCGCGAGTGCGTGAACTGCGGCGCCAACAACACGCCGCTGTGGCGCCGCGACGCCACGGGCCACTACCTGTGCAACGCGTGCGGCCTGTACCACAAGATCAACGGCGTCAACCGCCCGCTCGTGAAGCCGAGCAAGCGGCTGTCGGCGGCGCGGCGTCACGGCCAATGCTGCACCAACTGCGGCTCGCGCAACACCACGCTGTGGCGGCGCAACAACGACGGCGAGCCCGTCTGCAACGCCTGCGGCCTCTACTACAAGCTGCACGGCATCAACCGGCCTCTAGCAATGAGGAAGGACGGCATCCAGACGCGGAAACGTAAGCCCAAAAAGTCTGGCAACGGAGCGAAGCCGCCGCAAGACGGCAGCAAGAAAGATGACCACAGCTCTCCAGGAATGGACGACAGCAAACAGAGTCTCCCAGAGGTGCCCCTGCCGCTGACGCAGTCGATGTCTAGTCACAGCAGCCACGGCGCGAAGAGCCGCGAGCACGGCACGCCGGACACGTCGCCGCACGGGCACGCGCAGGCGCACGCGCTCGGGCACGCGGCGCCGCAGCAGCACGCGCACGCGCCGCCCGGCGGCCACGCGCACACGCAGTACCCACTGGGGCTGGGCGGCGCGCCCTTCCTGTCCAACCCGTCGCTGTTCAACATCAAGAGCGAGCCCGCCAGCGGCAACGCGGCCGGCTACGACGCATACCCGCCGCACTCCGCGCCGCACTACCACTCGCAGCAGCACTACCTGCACGCGCTACAGTACGGATTGGGCAACGGCGAAGAAGAGGAAGGCAGCGGCTTCCTGCACCAGCGCAACGTCACGGCGCACGCCAAGCTCATGGCATCAACGTAG
- Protein Sequence
- MFGGGGGVGAGYNGGGGDCADGYGLGYVAGGGRLQQYAAHFAPHQNVWHHHHPTHHDTYGEYTLPTRLPAAVRRALRAAPERVAPPPPHAPRHLRTCGTTTTPRTTTPTVSTHYLLVRLQQYAAHFAPHQNVWHHRHPTHHDTYGEYTLPTRLPAAVRRALRAAPERVAPPPPHAPRHLRTCGTTTTPRTTTPTVSTHYLLVRLQQYAAHFAPHQNVWHHHHPTHHDTYDEYTPPAATIHTSWGYSCFFYERLGASSGSPASGGGVGGVGGVAGGLYSQNMVMGSWCAPYDALQRPTAYDGVLEMYEEGRECVNCGANNTPLWRRDATGHYLCNACGLYHKINGVNRPLVKPSKRLSAARRHGQCCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSGNGAKPPQDGSKKDDHSSPGMDDSKQSLPEVPLPLTQSMSSHSSHGAKSREHGTPDTSPHGHAQAHALGHAAPQQHAHAPPGGHAHTQYPLGLGGAPFLSNPSLFNIKSEPASGNAAGYDAYPPHSAPHYHSQQHYLHALQYGLGNGEEEEGSGFLHQRNVTAHAKLMAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -