Basic Information

Insect: Lacanobia oleracea
Gene Symbol: NPLOC4
Assembly: GCA_950371165.1
Location: OX493392.1:27543061-27548738[+]

Transcription Factor Domain

TF Family: zf-MIZ
Domain: zf-MIZ domain
PFAM: PF02891
TF Group: Zinc-Coordinating Group
Description: This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0035 35 5.7 0.0 39 48 173 182 162 184 0.81

2 13 0.0038 38 5.6 0.0 40 48 225 233 203 235 0.82

3 13 0.0042 43 5.5 0.0 40 48 274 282 256 284 0.84

4 13 0.0048 49 5.3 0.2 40 48 309 317 295 319 0.83

5 13 0.0048 49 5.3 0.2 40 48 344 352 330 354 0.83

6 13 0.0039 40 5.5 0.2 39 48 378 387 365 389 0.83

7 13 0.0039 40 5.5 0.2 39 48 413 422 400 424 0.83

8 13 0.0047 48 5.3 0.0 40 48 449 457 439 459 0.84

9 13 3.4 3.4e+04 -3.8 0.0 40 47 499 506 495 507 0.84

10 13 0.0048 49 5.3 0.2 40 48 534 542 520 544 0.83

11 13 0.0045 45 5.4 0.0 40 48 579 587 568 589 0.83

12 13 0.0044 44 5.4 0.0 40 48 626 634 614 636 0.83

13 13 0.0048 49 5.3 0.2 40 48 661 669 647 671 0.83

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0035	35	5.7	0.0	39	48	173	182	162	184	0.81
2	13	0.0038	38	5.6	0.0	40	48	225	233	203	235	0.82
3	13	0.0042	43	5.5	0.0	40	48	274	282	256	284	0.84
4	13	0.0048	49	5.3	0.2	40	48	309	317	295	319	0.83
5	13	0.0048	49	5.3	0.2	40	48	344	352	330	354	0.83
6	13	0.0039	40	5.5	0.2	39	48	378	387	365	389	0.83
7	13	0.0039	40	5.5	0.2	39	48	413	422	400	424	0.83
8	13	0.0047	48	5.3	0.0	40	48	449	457	439	459	0.84
9	13	3.4	3.4e+04	-3.8	0.0	40	47	499	506	495	507	0.84
10	13	0.0048	49	5.3	0.2	40	48	534	542	520	544	0.83
11	13	0.0045	45	5.4	0.0	40	48	579	587	568	589	0.83
12	13	0.0044	44	5.4	0.0	40	48	626	634	614	636	0.83
13	13	0.0048	49	5.3	0.2	40	48	661	669	647	671	0.83

Sequence Information

Coding Sequence: ATGCCTCCTCACAAGCAAGCACCGGGGCCGCGGGGATGCGAACAGCCCCCGGATCGGAAAAGGGTTGGACCGTTGCAGGAGCGCGACGCGTACGGCAACGAGGTGGGCGTGTCGGCCAAGCGCGTGCCCGTGGCCTACCTGCTGGTGGACGTGCCGTGCGGCGTGGCGGCCGACGGCGGCGCGAGCACGTtcagcgcgcgcgccgccttcCCGCCCGCCCACCGCCCGCTGCAGCAGCACCTGCAGACGCTGCGCGCGCTGCACGCGCACCTGCAGGCGGCACCCAGCTTCCTGGAGGCCGCGTCCGACCTGCACGTGCTGCTGTTCCTGGCTAGCAACGAGGCGCTGCCACTGAGCCCGGCGGCGCTGGAGCCGCTGCTGGCGGCCGTGCGCGCGCaggacgccgccgccgccgacgcCTGGCGCGCCACGCCCACCGCTGCCACGCTCCACCAGCTCACCAGCGCCGCCGCCGACCACGACGACGACAGCATGCTGCTGGGCGCGGAGGGCGGCGCCGGCGTGTGGACGTGTCCGCTGTGCACCTTCCACAACGCGCCGCACAACGACGCCTGCGAGATGTGCGCCATGCCCAGGTAcgcacacgcacgcacacacacacacacacacacacacacacacagcatgcTGCTGGGCGCGGAGGGCGGCGCCTACGTGTGGACGTGTCCGCTGTGCACCTTCCACAACGCGCCGCACAACGACGCCTGCGAGATGTGCGCCATGCCCAGGTacgcacacgcacacacacacacacacacacacacacacagcatacTGCTGGGTGCGGAAGGTGGCGCCTACGTGTGGACGTGTCCGCTGTGCACCTTCCACAACGCGCCGCACAACGACGCCTGCGAGATGTGCGCCATGCCCAGcatgcTGCTGGGCGCGGAGGGCGGCGCCTACGTGTGGACGTGTCCGCTGTGCACCTTCCACAACGCGCCGCACAACGACGCCTGCGAGATGTGCGCCATGCCCAGcatgcTGCTGGGCGCGGAGGGCGGCGCCTACGTGTGGACGTGTCCGCTGTGCACCTTCCACAACGCGCCGCACAACGACGCCTGCGAGATGTGCGCCATGCCCAGcatgcTGCTGGGCGCGGAGGGCGGCGCCGGCGTGTGGACGTGTCCGCTGTGCACCTTCCACAACGCGCCGCACAACGACGCCTGCGAGATGTGCGCCATGCCCAGcatgcTGCTGGGCGCGGAGGGCGGCGCCGGCGTGTGGACGTGTCCGCTGTGCACCTTCCACAACGCGCCGCACAACGACGCCTGCGAGATGTGCGCCATGCCCAGcatacTGCTGGGTGCGGAAGGCGGCGCCTACGTGTGGACGTGTCCGCTGTGCACCTTCCACAACGCGCCGCACAACGACGCCTGCGAGATGTGCGCCATGCCCAGGTACGCAcacgcgcacacacacacacacacacacacacacacacacacacacagcatgcTGGAGGGCGGCGCCGGCGTGTGGACGTATCCGCTGTGCACCTTCCACAACGCGCCGCACAACGACGCCTGCGAGATGTGCGCCATGCCCAGcatgcTGCTGGGCGCGGAGGGCGGCGCCTACGTGTGGACGTGTCCGCTGTGCACCTTCCACAACGCGCCGCACAACGACGCCTGCGAGATGTGCGCCATGCCCAGGTacgcacacgcacacacacacacacacagcatgcTGCTGGGCGCGGAGGGCGGCGCCTACGTGTGGACGTGTCCGCTGTGCACCTTCCACAACGCGCCGCACAACGACGCCTGCGAGATGTGCGCCATGCCCAGGTacgcacacgcacacacacacacacacacacacagcatgcTCCTGGGCGCGGAGGGCGGCGCCTACGTGTGGACGTGTCCGCTGTGCACCTTCCACAACGCGCCGCACAACGACGCCTGCGAGATGTGCGCCATGCCCAGcatgcTGCTGGGCGCGGAGGGCGGCGCCTACGTGTGGACGTGTCCGCTGTGCACCTTCCACAACGCGCCGCACAACGACGCCTGCGAGATGTGCGCCATGCCCAGAGAATGTTCTGCAGAAGGCATTCGGCCCTCGCTAAATTGGAGTACTCCCATCGGGTATAGAGGACGACGGAGGATCGGCGATTCGATACCGATGCGAAAGCCTCCAATCACTAGTTATGTAAATCCCGAGGTGGCTTCTGGCTAG
Protein Sequence: MPPHKQAPGPRGCEQPPDRKRVGPLQERDAYGNEVGVSAKRVPVAYLLVDVPCGVAADGGASTFSARAAFPPAHRPLQQHLQTLRALHAHLQAAPSFLEAASDLHVLLFLASNEALPLSPAALEPLLAAVRAQDAAAADAWRATPTAATLHQLTSAAADHDDDSMLLGAEGGAGVWTCPLCTFHNAPHNDACEMCAMPRYAHARTHTHTHTHTHSMLLGAEGGAYVWTCPLCTFHNAPHNDACEMCAMPRYAHAHTHTHTHTHSILLGAEGGAYVWTCPLCTFHNAPHNDACEMCAMPSMLLGAEGGAYVWTCPLCTFHNAPHNDACEMCAMPSMLLGAEGGAYVWTCPLCTFHNAPHNDACEMCAMPSMLLGAEGGAGVWTCPLCTFHNAPHNDACEMCAMPSMLLGAEGGAGVWTCPLCTFHNAPHNDACEMCAMPSILLGAEGGAYVWTCPLCTFHNAPHNDACEMCAMPRYAHAHTHTHTHTHTHTHSMLEGGAGVWTYPLCTFHNAPHNDACEMCAMPSMLLGAEGGAYVWTCPLCTFHNAPHNDACEMCAMPRYAHAHTHTHSMLLGAEGGAYVWTCPLCTFHNAPHNDACEMCAMPRYAHAHTHTHTHSMLLGAEGGAYVWTCPLCTFHNAPHNDACEMCAMPSMLLGAEGGAYVWTCPLCTFHNAPHNDACEMCAMPRECSAEGIRPSLNWSTPIGYRGRRRIGDSIPMRKPPITSYVNPEVASG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -