Lole025045.2
Basic Information
- Insect
- Lacanobia oleracea
- Gene Symbol
- Pias1
- Assembly
- GCA_950371165.1
- Location
- OX493399.1:18516965-18523271[-]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.5e-23 8.6e-19 68.5 8.4 1 49 350 398 350 399 0.97
Sequence Information
- Coding Sequence
- ATGGTTAAAACACGATCTTCAGCGAGGGTAGGAAGCGCGGCCCCCAGTGCGCCCGCCGAAAATGGAACTTCTTCCGAACTTAGATCGCGGCTCAAAACCACTGAGAACGGTCACCGCTCGCAAAGGCCCTACAATCAAACTAGGCAAGTTCCAGTTCTTGTCGCGAACAATCAGTCGCTGTCATCGGGCGGCGTGGGCCCGGGCAGTGGGTCGCAGGGCAAGGACCCCCTGGCGCCCGCGCTGCCCGGCTCGCGCGCGCTCTACCAGCATCCCGCCGTCAGCGGCTACAACACTCAGGATTCCCGGGGACAAAATATGCCTGTCACGGCACGGCAGAACCCGATCTACCCGAGCAGTATGTACCACGGCtacggcggtggcggcggcggcaccCTCGCTCCGATGCCCTCGCCATCGCCCACGGCGCCGCTACCGCCCTTCCCCGTACACCCAGACGTGAAGTTTAGGAAACTGCCGTTCTACGACGTGCTAGCGGAATTGATGAAGCCCTCCACTATGATGCCGATGCAAGCCGGCCGCATGCAGGAGGGCACCTACGTGTTCCACCTTACTCCACAGCAGGCCACAGAGATAGCTTCCGGGAAGGATCTCGTCGGCACCAGCAACAAACTCGATTATGTCATACAGGCACAACTCCGGTTTTGTCTCCTAGAAACTTCATGTGAACAAGAAGACCATTTCCCGCCTAGTGTTAACGTCAAAGTTAACAACAAAATGTGTCCACTGCCAAACCCAATACCAACGAACAAGCCAACCCCAGAGCCGAAGCGGCCACCGCGCCCAGTCAACATATCGTCGCTGGTGAAGCTGTCGCCCACGGTCGCCAACACGATCCAGGTGACGTGGGCGGCGGACTTCACGCGCGCCTACGTGCTCAGCGTGTTCATGGTGCGCAAGCTGACCTCTGCTGAGCTGCTGCAGCGGCTCAAGAACAAGGGCACCAAGAATCCGGACTATACGCGGTCACTCATAAAGGAAAAGCTGTCGGAAGACTACGACAGTGAGATCGCGACGACCTCCCTGCGCGTGTCGCTCATGTGTCCGCTCGGCAAGATGCGCATGTCGTGTCCGTGCCGGCCCGCCAACTGTCCGCACCTGCAGTGCTTCGACGCGTCGCTGTTCCTGCAGATGAACGAGCGCAAGCCCACCTGGCTGTGCCCCGTGTGCGACCGCCCCGCGCCTTATGACTCCCTGGTAGTTGACGGGTACTTCCAAGAGGTGCTGACGTCGGCGCGGCTGTCGGGCGACTGCAACGAGATCCAGCTGCACGCGGACGGCAGCTGGTCCGCGcacgcgccgcccgcgcgcgcgccgctgcaGGCGCAGCCCGCCGCCGAGCCCGTCACGCTCATCGCAGACGATCTCGGTCAGTAG
- Protein Sequence
- MVKTRSSARVGSAAPSAPAENGTSSELRSRLKTTENGHRSQRPYNQTRQVPVLVANNQSLSSGGVGPGSGSQGKDPLAPALPGSRALYQHPAVSGYNTQDSRGQNMPVTARQNPIYPSSMYHGYGGGGGGTLAPMPSPSPTAPLPPFPVHPDVKFRKLPFYDVLAELMKPSTMMPMQAGRMQEGTYVFHLTPQQATEIASGKDLVGTSNKLDYVIQAQLRFCLLETSCEQEDHFPPSVNVKVNNKMCPLPNPIPTNKPTPEPKRPPRPVNISSLVKLSPTVANTIQVTWAADFTRAYVLSVFMVRKLTSAELLQRLKNKGTKNPDYTRSLIKEKLSEDYDSEIATTSLRVSLMCPLGKMRMSCPCRPANCPHLQCFDASLFLQMNERKPTWLCPVCDRPAPYDSLVVDGYFQEVLTSARLSGDCNEIQLHADGSWSAHAPPARAPLQAQPAAEPVTLIADDLGQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00948436;
- 90% Identity
- -
- 80% Identity
- -