Lole025810.1
Basic Information
- Insect
- Lacanobia oleracea
- Gene Symbol
- MYT1L
- Assembly
- GCA_950371165.1
- Location
- OX493400.1:7491111-7495983[-]
Transcription Factor Domain
- TF Family
- zf-C2HC
- Domain
- zf-C2HC domain
- PFAM
- PF01530
- TF Group
- Zinc-Coordinating Group
- Description
- This is a DNA binding zinc finger domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.37 4.7e+03 -0.8 0.2 16 24 171 179 167 180 0.76 2 4 3.5e-17 4.4e-13 50.5 7.8 1 29 374 402 374 402 0.97 3 4 2.1 2.7e+04 -3.2 0.1 5 10 423 428 422 428 0.80 4 4 0.023 2.9e+02 3.1 0.2 17 26 450 459 445 459 0.85
Sequence Information
- Coding Sequence
- ATGCGTGGTGCGACGTTCCCTGACCCTCACGGTAATCACTTGATACTTTCACCTTACCATCGGACGGTGCCGTTAACCACGCAAGCCTCCTTGTCTCAGATCAACAAGAGGAGGCTGGAGTTCGGCGTGGATGTAGAGACGTTCAGGAGCAACGACAGGCGCCTGGAGCGCATGAGCAGCGACGGCTCCatggacgaggaggagatccaCGGCAAGCGAAGACGACGCCTCCTCGACGACGAGCGACGAGATGAACCCGAGTTCCGCCGCCGACCGCTCCCCATGCACAGGCCGCAGACCCTGCGACAACCTGAAGAAGATGACGAAACACTCATCCGGGAGACACAGGCTGCGTTAAGAACTCTGTCTGGCAACTGGAATAGAGAACCTCCACAACCACCTAGTGCTGACGAAAATGAGGATGCCAACGGTTTCGAAAATTTATTTGATGATAAACGATCAGAAAAAATGCCTTCTTCCCCTTCACAATCGTCCGACATGTCGCAGAAAAGCTTCTCCACGCATCATCAAGCCCAACAAATGAATGGCAACAATAGTGATCATGAAACCAAAACTAATCTCATTAcaatagaaatagaaaaatGCGAAGATTACGACCGACTTAGCAGACAATCCACTCAGTACGGAGCGCCAAACTTCGACGAGCTCGTCGATTCGTCTTCCAATGAACTAGAAATTGATATGTCAGACAGATGCGATGATAAATACGATGACGACAGAGATATTAAGCCAAAACGTAAAGGTGAAATGGTGTCTGTGAACAAGCAGTCTTTATACAATGCTTACAAGGCGGCCACGGCAGCGTTACCGTACTCTACTCAGTCTGCGTTCAAGCCGCCTGCGGAAGTGAAGCACAGGCTTCATAACTCGTCATTGCCGAGCGAGCCTTTTGGGGGATACTCGAACGAGCACGACCGGAAGGAGAACAAGGGCTCGAAGCAGTACACGGTGCTGCAGCCGGCGGGCGCGGGCTCCCGTGCGGCCACCGCGCTGCAGGAAGCGCGCGCCGTGCCGCTGGCGCAGCCCGCGCGCGACTCGCGCCCGCTCAACGCGCTGTCCCCGCCGGCTCGAGTATTGGCGTTGCACGAGACAATACTAAAGTGCCCCACACCGGGGTGCAACGGGCGCGGCCACGTCAGCTCCAACCGAAGCACGCACCGCTCGCTGTCCGGTTGCCCCACCGCCGCGGCGCGCAAGGCCGCCGCTAGGTCTCAGAGAGCCAGACCCTCAGGCTTCCTCACCGCCGCTGGGTGCAACTCCACGGTTAGGTCACAGAGAGCCAGAATCTCAGGTGAGACGCGTCAATGTAACTTGAGTCAGCTCAACCAAAGCACACACCGCTCCCAGTCCAGCTGCTTCAACGCCGCGGCGCGCAAGTCCGCCGCTAGGTCACAGAGAGCCAGAACCTCAGTATCGCACAGTTCAATCTCGCAGCCTCCTATCGCGATCAGCCAGGAGAGCGTTGCCAGCTCATCGGGCAGCATCTCGCGCGAGCGCGAGGCGTCGCCTCGCAGCCCCGCAGTGAAGCGCGAGGCCGCCGACCTGCTGGTGCCCAAGCGCGAGGCCGGCGAGCCCGAGCGCGACTCCCCCAGCATGGAGACGCGCCACGCCGGCTACGGCGCGCCGCCGGATCAGAGGTCGCCGTATGAGCGGCCCCCGGACGACCACGTCAGGTCGTACAGGTAA
- Protein Sequence
- MRGATFPDPHGNHLILSPYHRTVPLTTQASLSQINKRRLEFGVDVETFRSNDRRLERMSSDGSMDEEEIHGKRRRRLLDDERRDEPEFRRRPLPMHRPQTLRQPEEDDETLIRETQAALRTLSGNWNREPPQPPSADENEDANGFENLFDDKRSEKMPSSPSQSSDMSQKSFSTHHQAQQMNGNNSDHETKTNLITIEIEKCEDYDRLSRQSTQYGAPNFDELVDSSSNELEIDMSDRCDDKYDDDRDIKPKRKGEMVSVNKQSLYNAYKAATAALPYSTQSAFKPPAEVKHRLHNSSLPSEPFGGYSNEHDRKENKGSKQYTVLQPAGAGSRAATALQEARAVPLAQPARDSRPLNALSPPARVLALHETILKCPTPGCNGRGHVSSNRSTHRSLSGCPTAAARKAAARSQRARPSGFLTAAGCNSTVRSQRARISGETRQCNLSQLNQSTHRSQSSCFNAAARKSAARSQRARTSVSHSSISQPPIAISQESVASSSGSISREREASPRSPAVKREAADLLVPKREAGEPERDSPSMETRHAGYGAPPDQRSPYERPPDDHVRSYR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00907523;
- 90% Identity
- -
- 80% Identity
- -