Basic Information

Insect: Lacanobia oleracea
Gene Symbol: -
Assembly: GCA_950371165.1
Location: OX493414.1:11617729-11623812[-]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.11 2.5e+02 3.3 0.9 3 39 74 122 72 129 0.59

2 7 0.0052 11 7.6 0.0 21 44 344 368 336 370 0.86

3 7 0.0071 16 7.2 0.2 15 43 434 467 418 470 0.71

4 7 0.0047 10 7.7 0.2 22 46 584 618 572 618 0.74

5 7 0.0014 3 9.5 0.1 3 44 669 719 667 721 0.82

6 7 0.00027 0.6 11.7 0.2 23 42 869 888 838 892 0.79

7 7 0.051 1.1e+02 4.4 0.1 3 15 1047 1059 1045 1106 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.11	2.5e+02	3.3	0.9	3	39	74	122	72	129	0.59
2	7	0.0052	11	7.6	0.0	21	44	344	368	336	370	0.86
3	7	0.0071	16	7.2	0.2	15	43	434	467	418	470	0.71
4	7	0.0047	10	7.7	0.2	22	46	584	618	572	618	0.74
5	7	0.0014	3	9.5	0.1	3	44	669	719	667	721	0.82
6	7	0.00027	0.6	11.7	0.2	23	42	869	888	838	892	0.79
7	7	0.051	1.1e+02	4.4	0.1	3	15	1047	1059	1045	1106	0.88

Sequence Information

Coding Sequence: ATGGACGGCTCAATAGTGGTTAAAACTGAGATGGGGACTAATGGAGAAATACTGCTTTTTTATGTTGATGAAAATGGTGGCAATGAAGAAGGGGTACTAACAACCGTTGAAAGCATAGAAAACCAAGCAATGCAATTGCAACAAGATAACTCCTTCATCATTCAAGATGTTGCAGATGACTCCAATGAAATAGGCATTGACCAGTCTGTATTAACAGATCACTGGACCGAGGATGAAACAAAGAAACTTCTGGTCTTCTACAATGATAATAAGCAGACTTTCATCAATGGTACAACAAAGAAGAAGCATCTATGGACCGTAGCATGCAAGACCATGATTGTTGGTAAAAACCCAAACTCATGTGAAGCTAAACTGAACAGCTTACAAGCAAAGTATAACGAAATTTGTGGTCACATACAAAAAGGAGTCTATGTAAAGTGGCCATACTTTGAACTATGCCATCAAATATTCCATGATGAGACCCCCATGATTACGGTTGAAACCTTAAATACACCAGAACCACAAATAATCAAAGTTCCTGCTCTTAAACAGAATTATGATAATGTTATGGTGGTTAAAACGGTTAACAGTCGGGCAACGGCTGATGAGAAAGTTGAAATGATGCTGAAGTTGTATCTCAAATACAAGAAAAACTTCCAAGCTGAATATTGGAGACGTGGCATATGGGAGACTATTGCATTAGAGATAGGTGAAGATGATGGAGAATACTGGCAGAAAAGGTTCTTGAACTACAAGCAACATTATCTAAGATTGATAGACAAAAGACGAGAGAGTGGGTCAGAGGGTATCAACTGGCCTTACTTAGAACTATTCGACAAAATCTTTGAAGGTGACGAAGACTTCCATAGAAAATATCTGACCGAGGAGTATAGGCAAATCGAAAACCAGGCAATATCTGAAGTTGAAGAGCCCCCATCTACAATTGTTGACTGGGACACCACAGAAATGACCGTATTAGTAAAATACTGTTTTGACTGCTTTGATGAATTTCAAGACAAAACCATTCCAAACAATTTCCTTTGGACTGAAATTGGCCGTTTACTGGACAAAACTGCTGAAGCTTGCAAATTAAAGTACGAGGAACTGAAGGATGCACATTTAGAGAAATACATTGAGGGAGGTTATGACTTACGGACAAGAAAACCCATTGCAATATTGTTTGATAATATAATAtccaaaaacattgaaaatcaaATCATAAAAAGTGGTACAATACCTGAGCAACTGGAGATGTGGAAGACTGAGGAACTAGATGAATTAGTGCAATTCTTCTACGACAACATAGAGATGTATAAAGACCTGATCTGCCATTTTGTGTGCTGGGCAGGTGTTACCAAAAAGTTGAAGCGAAGTCTGCAAAGTTGCCGAAGCCAATGGGAGGATCTTGTAAGCCTGTATAAGACAATATTGAATGATAAAAAAGAGAATCCTGACATGCAAATAGATTGGAGATATATTGAAGTGTTTGATAGGATTTTTGACTATGGCATGGATACCAAATTGCTTTCTGGCTACGAAACTTTGAAAGGATTTGGACACAATCAGAAAATTGAAACTTCAGGGAAGATTGGAGTTAAGAAAGTCAACATCAAACTGGACGACACCATGGAAGAATATACCGATGATGATGAGTCCTATGACGAACGGGGCTTCACGAAACGCACTAAACGACGCTCGGGCGACTCCAAAGCGTTCAAAATCCTCGAATACTACcagaaaaataaagataagttttcAACTACGAACAGGAACAAACATTCTCTATGGGACATACTGGCCAAACAGATTGGCATATCAGCAACGCAATGCGCTCACCGCTTCAGAAACTTAAAACAAGTCTACACGGCTTACGTCCAAAGAGAAATCAGCAAACCTGAAATGCCAATCCTCTGGCCATATTACGCACTGTGCAAAAAAGTTTTTGGTTATAGGGCAATCAAATCTAAACTCAAAAATGGAAAAATGGATTCAGATGATAGCGAAGACTGGTCAGCAAAAGAAATCAAACAATTAATCAACTATTTCTCGAACAACTTTGATGATATAAACCTTAACATAGAAGACACAGCAAAATGGTCAGACTTAGCTGGTGAAATAGGAAAAGGGGAGAACTCTTGCAAGGAGAAGCTTCTAGAACTCCGGAAGTcttatagaaagctgaaaacTATGAGAAGTAGGAACCCTGATGTTAAAATTTCTTGGAAGTACTTCAATATGTTTGAAGATATTTATAATGCTAAGGAAAATGGTGTGGAGACATTAGAGATGGATGATAGTGAAACCACGTATATGGAGATACCGGCCGGTTCGGATGAGAGGATGGAGCAAGAAGAAGACGACTACCAATGCATCATAGTAATACCAGAAGGCCAAGACATATCACAGATCGAGAACGCTCGAATTATAATACAAGATAACTCAATGCCTCAACAACAAGAAGAAACTATCCAAACAGAACCTGAACCTCTCAAGGAGGGTAAACCACTTCCAAAATGGACGAAAAGAACTAAAAAGAGGTTGCTTATATTCTATATAAACTATATCAGAAGTAATAAAGGGAAGGAGATTATCGCTAAAGAAATGTGGGCAGAAATCGCGTCTAAAATACCTAACAAAACGCCACTTGCGTGTAGGAAAATGTTTGCCAAACTCAAGGCTAACCACAAACAGATTGATGAGTCCAACCCTTATGTGAAGAAAACTCCTTATTTTGCGTTAATGGAGAAAGTAATGCGTTTAAAGCCGAAATTCGCGAAAACTGAACAAAATAAGGCTTTGAAAGATGGAAAAGTATACAAAGATGTTGCCTTACCTGATGAAAAAGTAGTACAAGCACTGCAATActatttagaaaatatagagGACTTCGTCAGTCCACGATTCGAGAAGAAATACCTCTGGACTGAACTTGCAAATTACGTTTGCGAGCCAATAACTAAAGTCTTCAACAAAATCAACTATTTAAAACAAGCTTACAACATGGATACGGACGAAGTAGCCGGCGAAAAGACTCCATTTGCAGAGTACTTGAAAGAAATATTTGCTAAGGAGATAGCAATCAAACTCTTTTTAGAAAACCAACCAAAGCCGGTCATTGAAGAACCAGGGGTAGAAGAAACCTGGTCTGACGAAGAGACGGAACAGCTACTAGAGTGGTATCTAAGCAATTTAGACAAATTCAAGAACCCTAAATTCGTCAGAAGCTATCTCTGGATGGAAGTTTCTGGCATGCTAAATAAAAGTGCTATTACCTGTTCCAAGAAAATGTCTGAAATCAGAACGCAATATAGGAATATGGTGAGAGAAAGGCCTGAGGAACTGAATGAGTGGAGGTTCCTTGATCTTTGTCAGAAGATATATGGGACGGGAAAGAAAGGTACCCCGATGAATAGTAATTAA
Protein Sequence: MDGSIVVKTEMGTNGEILLFYVDENGGNEEGVLTTVESIENQAMQLQQDNSFIIQDVADDSNEIGIDQSVLTDHWTEDETKKLLVFYNDNKQTFINGTTKKKHLWTVACKTMIVGKNPNSCEAKLNSLQAKYNEICGHIQKGVYVKWPYFELCHQIFHDETPMITVETLNTPEPQIIKVPALKQNYDNVMVVKTVNSRATADEKVEMMLKLYLKYKKNFQAEYWRRGIWETIALEIGEDDGEYWQKRFLNYKQHYLRLIDKRRESGSEGINWPYLELFDKIFEGDEDFHRKYLTEEYRQIENQAISEVEEPPSTIVDWDTTEMTVLVKYCFDCFDEFQDKTIPNNFLWTEIGRLLDKTAEACKLKYEELKDAHLEKYIEGGYDLRTRKPIAILFDNIISKNIENQIIKSGTIPEQLEMWKTEELDELVQFFYDNIEMYKDLICHFVCWAGVTKKLKRSLQSCRSQWEDLVSLYKTILNDKKENPDMQIDWRYIEVFDRIFDYGMDTKLLSGYETLKGFGHNQKIETSGKIGVKKVNIKLDDTMEEYTDDDESYDERGFTKRTKRRSGDSKAFKILEYYQKNKDKFSTTNRNKHSLWDILAKQIGISATQCAHRFRNLKQVYTAYVQREISKPEMPILWPYYALCKKVFGYRAIKSKLKNGKMDSDDSEDWSAKEIKQLINYFSNNFDDINLNIEDTAKWSDLAGEIGKGENSCKEKLLELRKSYRKLKTMRSRNPDVKISWKYFNMFEDIYNAKENGVETLEMDDSETTYMEIPAGSDERMEQEEDDYQCIIVIPEGQDISQIENARIIIQDNSMPQQQEETIQTEPEPLKEGKPLPKWTKRTKKRLLIFYINYIRSNKGKEIIAKEMWAEIASKIPNKTPLACRKMFAKLKANHKQIDESNPYVKKTPYFALMEKVMRLKPKFAKTEQNKALKDGKVYKDVALPDEKVVQALQYYLENIEDFVSPRFEKKYLWTELANYVCEPITKVFNKINYLKQAYNMDTDEVAGEKTPFAEYLKEIFAKEIAIKLFLENQPKPVIEEPGVEETWSDEETEQLLEWYLSNLDKFKNPKFVRSYLWMEVSGMLNKSAITCSKKMSEIRTQYRNMVRERPEELNEWRFLDLCQKIYGTGKKGTPMNSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00771874;
90% Identity: iTF_00851758;
80% Identity: -