Lole026587.1
Basic Information
- Insect
- Lacanobia oleracea
- Gene Symbol
- DNAJC1
- Assembly
- GCA_950371165.1
- Location
- OX493400.1:22913930-22927640[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-06 0.0054 18.3 0.0 2 31 211 244 210 252 0.86 2 2 1.6e-10 3.6e-07 31.6 0.1 2 43 292 338 291 340 0.87
Sequence Information
- Coding Sequence
- ATGAACGCTATCATCGCCATCACAAACATGTATAATGAGGTGCTCAAAAATGGTCTTCCAAACTGGCGCTCCGCCATTTACTACTACCGTCACGTGAGGAAGATGGGTCTGGCTGAGGGCTCCATCAtcctattcatcatcatcacattcgGGCAGTACGCTGTTGGCTGGGCGGCTTATGCTGAGAAACGATTTACTGCTGAGCAAATACTAAACAGTAGAGGCAAGAAGCACTCCAAGCGGTCAGGATTTGACCAAGGCATATCGGATATCTTGGACCAGCTCCCCAAACCCAGCGTGAAAGACACATTGCCGTTCCAAATACCGAGGTTTGCGTGGTGGTTGGTGACCGCTATACCGTACGGCATCATAGAGCTTAGGAGACAGTTGAAAGAGAGGGAGGAGGAAGCTAAGAGGCAGAAAAAGAGGGAAGAAGAAGAACGAGCCCGCGCAAACCGCGAGGCGGCGGCCGCAGCGGAGGCCAAGGCGGCTGGTGGCGGAGTACGCAAGCGGCGCGGGTTCGTGCCGCCCGCCCGGGACGCCGACTGTCTGCTGGACCCAGCTGATGAGCCTGAGGGGGGGCCCGTCGTTGTGGCTGTGAAACAGGCGGCCGCCCCAGTGATAACCGGCGGCCTCTGGACGGATGACGACCTGGCCGAGCTGGTGCGCCTCGTGAAGAAGTACCCGGGTGGGTCGGCGGAGCGCTGGGAGCGCATCGCCGAAGCCATGTGCCGCAGCGTGCCCGAGGTCACGCACATGGCCGCCAAGCTCAAGGAGAACTGCTACAAGATACCCGGCCAGGAGCCCGAGCAGCCGGTCGTCGTGGAGGCGCCCAAGAAGGTAAAAACGCGCAAAGCAGAGGAGACGTCTAGCGGTAACTGGTCGCAGACGCAGCAGAAGGCGTTGGAGAACGCGCTCGCCAAGTACCCCAAGGGAGGCGCCGGCGaccgctggcagaagatagCCAACACGGTGCCCGGGAAGACCAAAGAGGAATGCATGCAGAGGTGTAAATATCTATCAGACATGGTTAGAAAACAGAAGCagaaggaagaagaagaagcccagCAGAACGCAGAAGGAGACAACATCACAGAAGATCAACAAGACGAAGAGTGA
- Protein Sequence
- MNAIIAITNMYNEVLKNGLPNWRSAIYYYRHVRKMGLAEGSIILFIIITFGQYAVGWAAYAEKRFTAEQILNSRGKKHSKRSGFDQGISDILDQLPKPSVKDTLPFQIPRFAWWLVTAIPYGIIELRRQLKEREEEAKRQKKREEEERARANREAAAAAEAKAAGGGVRKRRGFVPPARDADCLLDPADEPEGGPVVVAVKQAAAPVITGGLWTDDDLAELVRLVKKYPGGSAERWERIAEAMCRSVPEVTHMAAKLKENCYKIPGQEPEQPVVVEAPKKVKTRKAEETSSGNWSQTQQKALENALAKYPKGGAGDRWQKIANTVPGKTKEECMQRCKYLSDMVRKQKQKEEEEAQQNAEGDNITEDQQDEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- iTF_00810014;
- 80% Identity
- -