Lole036800.1
Basic Information
- Insect
- Lacanobia oleracea
- Gene Symbol
- -
- Assembly
- GCA_950371165.1
- Location
- OX493408.1:14144388-14146805[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 5 1.1e+04 -1.9 0.0 22 33 236 247 233 251 0.81 2 5 7.4e-08 0.00016 23.1 0.1 1 45 267 313 267 314 0.89 3 5 1.5e-08 3.2e-05 25.4 0.1 2 44 321 367 320 369 0.95 4 5 1e-09 2.3e-06 29.1 0.0 1 41 373 413 373 417 0.95 5 5 1.4e-05 0.032 15.8 0.0 3 45 425 469 423 470 0.89
Sequence Information
- Coding Sequence
- ATGGACATTGACAACTTCGATCTTGATGATACCGACTCTGATCTCGGCAGCGTACCGGACCGATCGGAACCTGATCCTAGTGAGCTGATTGACGATGACGACGATCTACACAGTGAACCGATATCGCGTACTGTACGTTCCCTCCCCAAATCAATTACCCAACTAACCCGTAGTGGCTTTACAAAGAATAGTGAATCATCAGAAATATTAGTTCAAATAGATCTAGCCTTGTCTGCAAACAAATTACTAGACGAAAAGTTGCATAGGCTGGAAAGAGTTCTCACTTCACGTCTAAATGAATGCCGGGAGAAGCTGAAAGTAGTCCAAAGTAGTGCTggtgaaaatgataaaaaccAAGTTTTCCGCTACATCAATTGTGGTAGGCCCTATTTTAAAGACAAACAGAACTTCCCAGctccagataatgatgatgccAAAATGGCAAAATCTCAGATGTATGACTTCTCCTTAGTAATTTCTGCACCGGGCTGGACAGTGAGGGACAAGTCTCAATTGATTAGTGTGATTCACAAAATGTCAatagagataaaaaaaaaagagttgcaTGCTATAATTACTAAACTAAAGCGCAATTCAGAACCATCAAAACaacaagaaaaagaaataatggCCATTCGAAAGGAAattgataaagtaagtaaattgcCTTTGAGTAAAGTAGCTCTCCCAATAGATCAAGAGTATGATTGGGACGCATTAGCAAACAGGCTGAACAGACGGCATACTGCCCAAGAGTATCAAGCACTCTGGAAGTTATTCTTTCATCCGACAATTAGCAAAAACAGTTGGAGTAAAATTGAACATGCCAATTTACAGCAAATTGCTAATGCAAACCATAAACAAGATTGGGATGCTATTGCTCACAAACTAAATACTGGTCGGACTGGATATCAGTGCTTTGTGTACTTCCGGACTAATATGAACAGTTCTTTTACTGGAAAGAAATGGACCAGTGAGGAGATACAATACCTTAAAAGACTAATAGAATATTTCAAGGAAGACTTCTACATTCCGTGGGGGAAGATAGCTGCAGCAATGGAAAACCGCACTAAAATCCAAATCTATAATAAGTATATGAGGCTCATTGAACTGAGGAAAGGCAGGTTCCTCCCTGAGGAAGATGCGGTCATTCTTAACTGTGTGCAGAGATTTGGAAACAACTATAAGAGGATGGTTAGTTTTTTACCCGGCCGATCTATGGTCCAGATACGTGCCAGACATCAAGTTTTGAGCAAAATGAGAGTGTCAACTGTATGGACTGTTGAAGACGATAAGAAACTTATTCATTTGATGAAAAACCAAGAGTCTAATATGAACTTTTCAATAGCCACACAACATTTTCCAGGCAGAAACAGAACAAAAATTAGAACTAGATATGTTACTCTAATGAAATGGATGAAAAAACATCCCCATTTGGGTTTAGAACATGCACCACGACGAGGCGCACGGCGATTGAATCATGGCCGGCCCATGGACAACTTAAATGAGGCATTAGATAATTTGCATAACTCTTTAATCACAACAGTTGAAACAAAAGCCAAGAAAAAGAAGCTTAGTGATCAGTCGACACACGCAGAGTTGGATGATGCAAttgatgtattttttataaattatttaatacaaaaagaaacagaagcAGAGGTGAAGAAAAAAACTCCTGAAGGTCACTTAGTCTTAGGTCCTGATGACAAGGTGTCAGTTGCAGAATTAAATATTACAAACATGCGTaaagatttattaattttaaatgcttGTATAGATGAGAAAAAGTATTTAGATAGCACATACAAAATAGATTATCCAGATTTAGGAGATAACAGTCAAGATGTCTCTTTAGTTAGAGTGAAGTCCTATTCTCGGAAGAACTCCAGCCAAACTATCCTGGTTAAAGAAACTCCTAATGTTTGGGGAAAGCCTCTGCTTTTTGAAGGCACGAGTACTATGGGACAGCGGACCTTTGTGTTACCCCCACAATTTGCAAGTATAACAGGTATTAAAGCAGTAATAAAATGTGTGATGGAAAACAGTCAATACAGTGAATCTATCAACTTGCATGTGCTTTGCAAGCGAAACAAATTACTGAAGGAGCATTTAGAGCAGGTTCTAGAAAGATTCTATGTTGTGTTCACATGGCCAATGATTTTATCCAATGAGGGGCCTAATAAAATCACTGTATTATATTCACCTAAGATAAATTCTGTTTTCACCAGACCACCAACATTGCCGACTGCGCCGGAAATTACGATAAAtgttaaatgtataaaaaaatataaaaataaggaaGTAACAGAAAACATTGATCTGAATCAAGATGATGTTATGAATAAGAAAGCTGTTATTGCTGTTGAGGAGGAAATAGATAGTAATGATGAGAAGATAGAAGACATGTTTGAATAa
- Protein Sequence
- MDIDNFDLDDTDSDLGSVPDRSEPDPSELIDDDDDLHSEPISRTVRSLPKSITQLTRSGFTKNSESSEILVQIDLALSANKLLDEKLHRLERVLTSRLNECREKLKVVQSSAGENDKNQVFRYINCGRPYFKDKQNFPAPDNDDAKMAKSQMYDFSLVISAPGWTVRDKSQLISVIHKMSIEIKKKELHAIITKLKRNSEPSKQQEKEIMAIRKEIDKVSKLPLSKVALPIDQEYDWDALANRLNRRHTAQEYQALWKLFFHPTISKNSWSKIEHANLQQIANANHKQDWDAIAHKLNTGRTGYQCFVYFRTNMNSSFTGKKWTSEEIQYLKRLIEYFKEDFYIPWGKIAAAMENRTKIQIYNKYMRLIELRKGRFLPEEDAVILNCVQRFGNNYKRMVSFLPGRSMVQIRARHQVLSKMRVSTVWTVEDDKKLIHLMKNQESNMNFSIATQHFPGRNRTKIRTRYVTLMKWMKKHPHLGLEHAPRRGARRLNHGRPMDNLNEALDNLHNSLITTVETKAKKKKLSDQSTHAELDDAIDVFFINYLIQKETEAEVKKKTPEGHLVLGPDDKVSVAELNITNMRKDLLILNACIDEKKYLDSTYKIDYPDLGDNSQDVSLVRVKSYSRKNSSQTILVKETPNVWGKPLLFEGTSTMGQRTFVLPPQFASITGIKAVIKCVMENSQYSESINLHVLCKRNKLLKEHLEQVLERFYVVFTWPMILSNEGPNKITVLYSPKINSVFTRPPTLPTAPEITINVKCIKKYKNKEVTENIDLNQDDVMNKKAVIAVEEEIDSNDEKIEDMFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00952676;
- 90% Identity
- iTF_00851752;
- 80% Identity
- -