Lole037052.2
Basic Information
- Insect
- Lacanobia oleracea
- Gene Symbol
- Mblk-1
- Assembly
- GCA_950371165.1
- Location
- OX493408.1:18689765-18724283[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-12 9.5e-10 39.5 0.0 2 37 170 206 169 210 0.91 2 2 7.1e-18 2.1e-15 57.6 0.0 1 43 378 421 378 423 0.95
Sequence Information
- Coding Sequence
- ATGGAAAGCCGATCCCAATTTAGCAGTAGCCTCTTTGTGGAGACTAAGAAAATGGCCGTGAGTCCCGCATCGGAGTCGGACAGCAGTTCGGTGTCGGGGGCGAAGAGTCCTGCGTCGGCGCCGCCTCTGCTGCAGCACTTGCTCCAACTGCAGGCTCAGAACCCTCAGACTATAGCACAGGGGTACACAGACATGTGTGTGCAGTTTCAGCAGATGCTGACGGCACTGGCTGCGCTCGGCAGCGGGCTGGTGCCACCGCCGCCGCTGTCGCAGCCCTGGATGATGCAGCGGATGGTGCATAGGCAGACCGATAGGCTACCAGAGGTGGGTGAGAAGGCGCCAGCATCTTCCTCCCCGAACCTCGCGGAGCAGCCGCTGGACCTTAGCGCCAAGTCCACCTCCAGCACCAGCGGCACACCACCTCCTGACTCCAAGCATTTGGATAATAGATTGAAGCGCACGGCGCTGGAGAGCGCCAGCAACAGCTCCGGGCGGCGCGCCTACTCCGACGAGGAGCTGCAGGCGGCCGTGCGCGACATCCAGGCCGGCCGCCTGGgcacgcgccgcgccgcgctgctGTACGGCATCCCGCGCTCCACGCTGcgcaacaagctcaacaagTTCGGGCCCGTCGACCACGCCGACTCCGACAACGACAGCGACGCCGAGCGCGCCGACTCGCCCCCCTCCGTCATCCTCAAGATACCCACGTTCCCCCCGCCCGACGACAAGAGCCCCTCCCCCGCGGGACAGCTCCAGGCCCCCATCGCGCCCATCACGCCGATGCTCCCCGCGGGCCAGACCTCGCTCAAGGCGCCCTCGCAGCTGCTGCTGCCGCCCTCCGTGTTCGCCGACCCGCCCTCGTCGCAACACCTGTTCACGTCCCTCAGTGACGTCATCGCTAAGAGTATCAGCCAGAAGTTCCAGCAACCACTAGACAGGCCGCACCACCAGCCCAGTGAGCTCATGTACGCGCGAGGGCCCGACCGACACGTGTCCGTCATCAAGACTCCGCCGGACAACCAGCGCTACCCCGCGCCCGGCAACTCCAAGCAGATGCCCAACAACAACGGGCAGCCCGCCGCCGGCGGCAAGGGCACGCGGCCCAAGCGCGGCAAGTACCGCAACTACGACCGGGACAGCCTCGTGGAGGCCGTGAAGGCGGTGCAGCGCGGCGAGATGTCGGTGCACCGCGCCGGCTCCTACTACGGCGTGCCGCACTCCACGCTGGAGTACAAGGTCAAGGAGCGCCATCTCATGCGGCCGCGCAAGCGCGAGCCCAAGCCGCCACAGGACGCCGGCAAGCCGCAGCCGCCCAAGCCGCCGCCGCCGAAACCGCCGACGAAACCGTTCTCCAACGGCCTCAACGGTCCGGAAGCCCCAGGCTACCCGCCGGGCTACCCGTTCTGGCCCGGCAGCGGCttcccgccgccgcccgcccccGACCTGTACGCCTCGCACATGATGCGACGACTGCGCGAGGAAGCGCCTCCGCCCGCCAACGGCTCGTTCCTGGAGGGCATCATCCGCTCGAGCCTGGAGCGGCCGGCGCTGCTGCAGCGGCTGGCGGCGGCGCCGGGCGAGGCGCGCCGGCCGGACGACGGCGAGCCgccggcgcggcgcgcgcggctgGACAGCTCGGACCAGGCGCTGGCGGCGGACATGCGCGAGGCGGTGCAGCGGCTGCGCGCCGACAAGCTGCGGCCGCGCAACGGCACGCCCaccccgccccccgcgccgcccgccgagccgccgccgccgccccccgcgccgcccgccgcgccgcccgacCGCGCCTAG
- Protein Sequence
- MESRSQFSSSLFVETKKMAVSPASESDSSSVSGAKSPASAPPLLQHLLQLQAQNPQTIAQGYTDMCVQFQQMLTALAALGSGLVPPPPLSQPWMMQRMVHRQTDRLPEVGEKAPASSSPNLAEQPLDLSAKSTSSTSGTPPPDSKHLDNRLKRTALESASNSSGRRAYSDEELQAAVRDIQAGRLGTRRAALLYGIPRSTLRNKLNKFGPVDHADSDNDSDAERADSPPSVILKIPTFPPPDDKSPSPAGQLQAPIAPITPMLPAGQTSLKAPSQLLLPPSVFADPPSSQHLFTSLSDVIAKSISQKFQQPLDRPHHQPSELMYARGPDRHVSVIKTPPDNQRYPAPGNSKQMPNNNGQPAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDAGKPQPPKPPPPKPPTKPFSNGLNGPEAPGYPPGYPFWPGSGFPPPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPALLQRLAAAPGEARRPDDGEPPARRARLDSSDQALAADMREAVQRLRADKLRPRNGTPTPPPAPPAEPPPPPPAPPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00147216;
- 90% Identity
- iTF_00122280;
- 80% Identity
- -