Lole030501.2
Basic Information
- Insect
- Lacanobia oleracea
- Gene Symbol
- kn
- Assembly
- GCA_950371165.1
- Location
- OX493403.1:17313514-17325145[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.6e-124 8.1e-120 402.3 0.0 205 387 1 199 1 204 0.99 2 2 4.4e-08 0.00037 20.4 3.4 420 469 208 259 200 367 0.80
Sequence Information
- Coding Sequence
- ATGAGAAGGTTTCAGGTGGTAATATCAACGCAAGTGATGGTGGACGGTCCTCTCCTAGCGATATCAGACAACATGTTCGTGCACAACAACAGCAAGCATGGCCGGCGCGCGAAACGGCTAGACCCTAGCGAAGGTACAGACGGCGCCCCAGACAATACTTGTCTATATCCTCCTCTGCCGGTAGCCACTCCATGCATCAAGGCGATATCGCCGAGTGAAGGCTGGACATCGGGCGGGTCGACAGTTATCATAGTCGGGGACAACTTCTTCGATGGACTACAAGTTGTATTTGGAACCATGTTGGTTTGGAGTGAATTAATAACATCACACGCGATAAGAGTGCAGACCCCCCCGCGGCACATACCCGGCGTTGTGGAGGTGACGTTGTCGTACAAGAGCAAGCAGTTCTGTAAGGGCGCGCCCGGGAGATTTGTTTATGTTTCGTTGAACGAGCCAACGATAGATTACGGCTTTCAGAGGCTACAGAAACTTATACCGAGACATCCCGGAGACCCGGAAAAATTACCtaagGAAATAATCCTCAAAAGAGCGGCGGACTTGGCGGAGGCGCTCTACTCGATGCCCCGCAACAATCAGCTGGGTCTCGGTGCGCCACGGTCACCACCAGCCAGTATGCCTTTCAACTCATACACAGGGCAGCTAGCCGTCAGCGTGCAAGATACTGCGGCCTCACAGTGGACTGAAGAGGAGTACGCGCGCAGTGGCGGCTCAGTATCGCCACGGTACTGTTCCGCCGCGTCGACACCGCATGCGGCGCCCGCAGCATACCCGCATCCACAACACTATCCCGCTCCGCCGACCTCACTCTTCAATACCACGTCTCTGTCTCTAGGACCGTACCATCCAGCGAACATGAATGGACACTTATCATCTGACCGTCACTATAACGCGTATAATACGAAAGATAGCGGTCATTACAGTGAAAGAAATGGGAATTCTAAGAGCCTGCCCGACTGTCCGGTAAacattcatacaaaatgcacCGGCAGCGATATGAAAGGGGCTCAGAATAAAGAGTCTAAGCTGAGAAGCGCCTTTGCCGTTGTGAGGCAGAGTCCGCCACGGGTAGCCAATGAGCATCATCAGAATTGGCACCACCTCGCAGTTCAGTGttag
- Protein Sequence
- MRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPSEGTDGAPDNTCLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAAPAAYPHPQHYPAPPTSLFNTTSLSLGPYHPANMNGHLSSDRHYNAYNTKDSGHYSERNGNSKSLPDCPVNIHTKCTGSDMKGAQNKESKLRSAFAVVRQSPPRVANEHHQNWHHLAVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00237253;
- 90% Identity
- iTF_00176893;
- 80% Identity
- -