Lole044905.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lacanobia oleracea
Gene Symbol
Arid5b
Assembly
GCA_950371165.1
Location
OX493415.1:16117312-16134529[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.5e-14 4.7e-10 41.2 0.1 3 89 275 348 273 348 0.88

Sequence Information

Coding Sequence
ATGCAGCGAAAGAGAGAAAACGTATCCCCATCCCTGTCTCAACCAGCTGACTGTCAAAATCAGCTGTCCCAACTGCGATACCGTTTCGACATCGCAGCGATACCGCTACCCCTGTGCCAAATATCCGGGGCTTGGGGTGAGGACGAGGTACTCGCCATCAACGACAAGGTGGTCCTCCGAGCTGATGACCTGCTGTCCTGGATGTGTGTGGGCACGGAGTGGCGCTGGGGGCTGCGGGCCGTGTGGCGCGGGGCCTGCGCCCCCCCGACCGCGGCGGACCTCCCCCGCCACGCGCCGCTCACGCACACCAAGCTGGACTTCAGTGATGTTGATACGGAGAAGAGTGCCATTGTGGAGGATGCTGAAGCCCCAGGGGTCGTAGTGTTCTCGTACCCTCGCTACTGCCGCTACCGGGCGCTCATAGCCCGGCTGGAAGGCATTCAGGCGTCTTGGCTGCGGGACTCCTTGGTGGCAGCCCTAGGCGGGTACGCGGCGCCCACCAGCAACACCAGGATATTGTACTGCAAGGACACCTTCGAGTACCCTGAGCTGGAAGGTCACGAGTTCGTGTGCAATCACTTGGCGCCGCGCCTGAAGGGCCGCCCCCggggccgccgccgccgcgcgacCACTCCCGACCGCCCACACGACCCGACCGACCCGCGGCCCGACTCCGACCGCTCCGACTCCGACGAGCCCCCCGCCTCCCGCCCCGCCAGCGACCCGCCGACGCCGCGGCGCCTCTCCCTCCGCAACGGCGCCCCCCCTCCCAGCGACGAAGATGAGGAGGAGTACAAGCGAGTGGAACAGACTCCTGAGGACCGCGCCTTCCTGCAGCAGCTGAAGACGTTCTACAAGACTCGCAGCGAGCCCTTCAAGAGTGGACACACGTTGAAGCACCTGTCGCTCCGCGCGCTGTACTCGTGGGTGTGCATGCGCGGCGGCTACGAGGCCGTCTGCCGCCACCAGCTGTGGCGAGCGCTCAGCGCCGACCAGCCCGCGCGCACCCGGAGACACTACGAGAGATACCTCCTCCCCTTCGAGAACCACGAGCGACGCAACGGCACATCGCTATCGCTAAAACTAAACGGCAAAATAGACAACGAGCCGCGAACCATCGCTACCATAGACGTCACAGACTCCCCCCGTCGCGAAGACGACAAAGTGCTGCGGACCCCCTCGCCCCACTACGACAGATACGACAAACTCGACGCCTACGACAAACTCGCTAACTACGACAAACCCGACAACTACGTCAAACCTGACATCGATAGTGAAACGGGAGAAATTACAACCAAAGATGATGTTATAGTAAAAAATGCGGAAGAATTGAATAGGGAATTTTTAGATTCACTGCCCAAAGAGGAGAAGCCTGTGAAGATTTCAGTGAAACCTGTGGAGAAGTTGATTGAGCCGGCGAAGTTTGAGGGTCTGGAGATAAAGGAGCTTCCTCCTGCCAAGGAAGAGGTCAGGGACCTCAGTCAGAACTATTTGAGTGATATGCAGAAGTTTAGTATGGTTCCAGGCGCGCAGTCCCCGGCGGCGCGCTCGGCGCCGCTCAACGGgcacgccgcgcccgcgcactCCGACCTCAAGACGAGCCGGCCCGCGGGGCGCAGCTCCCTGCGTGCAGTGCGCGTGAAGCCGACGCGCGCGCAGCTCAACACGCCCGCCAGCACGCCGCCGCAGTCGGGTGCGTCGCCCCCGGGGCCGGGCGGAGGTGCCAGCGGCCCGGGCGGGGCAGGTGGCCCCCCGGGCGGCGCGAGTCTCCTCCCGGGCGGTGCGGGAGGGCCGGTTACGAACTTCGGTATCCACCACCCACCGCCGCCCACTATCGACGACGACATCGTGGAGGTTCCGTACAAAGCGAAGAGCCCAGAGATAATTGACTTGGACGAGTACCCGGAGAGCCCGCAGGCCGTCAAGAAGAAGAAGCTGGACATCCTAAAGGAGCGTGGCCTGGAGGTCACCGCTCTGCCGCCGCCCTGGGCCAGCGCTCCCCACGTTCTGCCGCCTCCCATGATCCTCAACCCAGCAGTGCAGCACCAGATCATGACGCAAGCACAACTCTTCCAGATGTACAACATCATCCCACAGAAGTACGCCAACGGCCTGCAGCCGCCCAAGGTCATCCAAGCGTCCTCCATCTTCGGCAGTTCTGGTCCCGAGAAGACAGTATACGGCAACCCCAAGGACCCGTTCATGCCCCCCCCGCACGTGCTGCGCGGCGCCCCCCTGCGGCCGCTGCGggcgccgccccccgcgcccgcgccccacGTGCTGGACCTCACGTGCAAGTCGAGCAGCCTGTCGCCGCACGAGGTCGGCCCGAGTGGCTCCGAGATACAGAACTACGCCTTAGTCGACGGTAAGGCAGTCGTCGGCTCCAACTTGGAGATTACCTTAGTCAATAAGAACCGGCCTCCGCAGAAGAGGTCTAGCAATGGGAAGTTCATGTCGGCTAAGACTCCCACCCCGCCGAAGGACGTACCCAAGAGCGGTGCACAAAAGAAGCCAGCTATCAACATACCGAACTATCAAGTCAGAGAAGATTCCTCTCCTACACTTGGCCAGTTCCAGGAGCCGTACGTGGCGCTGTATAGCAGTCTAGCAGGTCAGATGGACCAGAGACAGCTGGCCATGTACCGCGAGCTCGTGAGCAGGCAGTTCCGCTACCCGGGCTTGCTCAACCTGCCCACCACCAACAATTAG
Protein Sequence
MQRKRENVSPSLSQPADCQNQLSQLRYRFDIAAIPLPLCQISGAWGEDEVLAINDKVVLRADDLLSWMCVGTEWRWGLRAVWRGACAPPTAADLPRHAPLTHTKLDFSDVDTEKSAIVEDAEAPGVVVFSYPRYCRYRALIARLEGIQASWLRDSLVAALGGYAAPTSNTRILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRATTPDRPHDPTDPRPDSDRSDSDEPPASRPASDPPTPRRLSLRNGAPPPSDEDEEEYKRVEQTPEDRAFLQQLKTFYKTRSEPFKSGHTLKHLSLRALYSWVCMRGGYEAVCRHQLWRALSADQPARTRRHYERYLLPFENHERRNGTSLSLKLNGKIDNEPRTIATIDVTDSPRREDDKVLRTPSPHYDRYDKLDAYDKLANYDKPDNYVKPDIDSETGEITTKDDVIVKNAEELNREFLDSLPKEEKPVKISVKPVEKLIEPAKFEGLEIKELPPAKEEVRDLSQNYLSDMQKFSMVPGAQSPAARSAPLNGHAAPAHSDLKTSRPAGRSSLRAVRVKPTRAQLNTPASTPPQSGASPPGPGGGASGPGGAGGPPGGASLLPGGAGGPVTNFGIHHPPPPTIDDDIVEVPYKAKSPEIIDLDEYPESPQAVKKKKLDILKERGLEVTALPPPWASAPHVLPPPMILNPAVQHQIMTQAQLFQMYNIIPQKYANGLQPPKVIQASSIFGSSGPEKTVYGNPKDPFMPPPHVLRGAPLRPLRAPPPAPAPHVLDLTCKSSSLSPHEVGPSGSEIQNYALVDGKAVVGSNLEITLVNKNRPPQKRSSNGKFMSAKTPTPPKDVPKSGAQKKPAINIPNYQVREDSSPTLGQFQEPYVALYSSLAGQMDQRQLAMYRELVSRQFRYPGLLNLPTTNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00299934;
90% Identity
iTF_00851504;
80% Identity
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