Lole003143.1
Basic Information
- Insect
- Lacanobia oleracea
- Gene Symbol
- Kdm4B
- Assembly
- GCA_950371165.1
- Location
- OX493385.1:34240922-34257564[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.4e-18 4.2e-14 54.2 0.0 17 89 884 953 870 953 0.87
Sequence Information
- Coding Sequence
- ATGGAAACAAATATTCAGAGGTTACGTTTGCACTCCCATTTGACCTCACAACCTGTAGTGCTCATTGAGAGGCTGCGCGGCCGGAACCCGGTGCGAGACGTGCCGCCGCCACCTCAGACAGAGACAAGCCCACCACAACGCTCCAAATCTACTATTAAGAATACGGCTGAGCCACCCAAATTGCACGTTGTCCGGAAAAAGCAAGATTGCAATCGTGTTCATGCAATGTCGTTAAGGTCGCGACGCGTGAGCAGACTGGAAATGAACAAGCTCTTAGCACAAAGTTGTGCGCCATTAAGAAAAACTGCCTCGAAGCGTAAAAAAATCTCTTCTGACGAAGATGAACCACTAATTTTCCAAAAAACTCGCATAAAAAGCCCTGTTGCTGCTGCCAGTATGAGCTCATGGGAAAAAGCACTCAAAGTGAAATCTTCCAAAGACATTGATGTACTTCACAAAATCACAGCAAAAGAGAttaaaacaaatcaagtatcctCAAAGTATATCAAAGAGAATAGTGCCAAAAAGAAGAAGAGCGCTCTGAAGAGGATTTCTAAAGAGTGCTCTCCCAAGAAGCCCCTCGCCACCGCCTCCGCCGTCCGTAAAAAAGACCTCACGAGTGCACGTGACGAACGTGTTAATGGAGCTTCCCTTGATAATCTAGTCACCCGAAATGATTCGATAGTGGCGGTAAACCCGGTAATAATTCCAGATAATCAGGCGGTAGTCTCAATTGGTCCGGTGGTAGTCCCGGATGATCCGGTAATAGTTCCCGTTGCTCCGGCTGAAGTCCTAAAGTCTCCGATAGTTGTCCCAGATGATCCGGAATTAGGCATAGATGCTCTGGTAGTAATCCCAGATCATCCGGTCGCCTTAAGAGCCCCAGTTGCCCCGTATAAATCAGGTGATTTCGAGTCGGCTGAGGAAAACACGGAATATTCAGTTAGATTAGATGGAGCTCTAGCTGTCTTAGAGGACTTAACCGATCTGGACAAAGTTTCGGATGTCGATGATGAACCAATGGTGCGGGATGAACCGAAAGTGCGGGAAGAAGTACACGACGAAGTCTCATTGAACCCGAAAGACATAGCTGACCAAAATCGACGTACTAGTTCTCCAAGTTCGTCTCTGGTATACCGTTGGGATTCCTCTGATGATGAGCCAATGGTGAGAGGTGACGCGGCAGTGCAATTACCTCGACGTACCAACGACTCTCCCGCACCTGGGCCAAGTGGCATGCAGTTACAATTGAGAGAAAACAATTCGGACATTGATCAAGACAATGATGACGACAATACGAACAAATTAAAGTATCTAATTAAAAAACATCTCATCTCATCAACTGTCAATTTTGGGGCTGGGCGAAAGGTTCAGACATTGCCGAGAACTTGCGTGGCAGCAGGGTGGCGTACCGAGCAGGACGTCATCAACGCCTCTACAGAACAACTAGACTCGCGCTGCAAGCTTTGTAAGCCCTGCCACAGAATTGAAAAACTGATAAATGCATCGACAttagttaaaacaaaaatagtaaGGGGCGGCAGCAGCAGCCAGTATAACACAAGCGAGTCTCCAGAGAACGGACTAGAGAGGGAAGGTGAAACAGAAAATGGCGAAATGGGCATCGATAATCGGACGGCTGCTGGTGAAAAAGACGATGGCTATCTTCGCTTTGACGTACCATCTGGACATTGTAATGTAACCATGAAAGTCCGAGCTCCCGTTATATACGGAAAAACAATCTTGGGGGTGAATTGCGAGAATAGTGGCGAATCTTCGAAAAATAAGCAGATTCAGCTTCAAGGTAAAGAACATGTGCTTGACAAACTAATAGATACCCTGAATATTAGTCAAAACGTAAAGTCGGAGGGTCCAAACGTTAAATCGATAATTCGAAGCGATAATCCAGTTTGTCGAAGGAGAAGCATATCATCCGACAGCACTGAGACGAGCAGTGATAGCGATACTGAGCAAGAAAAGACGCGCCGCGTTAGGTCTGAAAGGAAGAACTTGAAGTACCAGAAAGTCGTTGCTACTAGGAGACGGTTAGCGGAAGCGAAGGGGAAACAGGACCGCATCAGACAAGAAAAAGAAAGAGATATCCGGCGcattgaaaagaaaaagaaagatgaACCGTCACTAGTGGAGGTGCAAATATCTCGCTTAAATGAGCGTTTTGAAGAGTTGCAGAAGGAGAAAGCAAAAGAAATTGCTCGCCTCAAGGAGAACATCACAGTTGAAGTGCGCGCAAAAATGGAGGCTGATCGCCGTATGTGCGATGAAGTGGACACAATGGCGAAGACCCTCGAAAATGAAAAAGACGCTAAGAATATGAACTCGAGACATCTAGATGAGCCTGGCACCAGCGAATCAGCGACGGAAGGCGGCTCTCTGGTTGACGCGCCGGTATTCTTCCCCACTCGCGAAGAATTCGAAGACCCAGTCTCCTTCTTCGAGAAAATCTATGCGGAAACGGTGAAGTTTGGAATATGTAAAGTGGTGCCCCCAGCGGGTTGGAGCCCTCCTTCGGAGATCCACGGCGACATTAGATTCGATTATATGAATCAGTACATCTCGCGACTGTTCAGCCGATGGGGAGCGGCCGCGAGGGAGCTCGCTGCTATCAAATTATGTCTTCAACTACATACGAATATTAATTTGACGCGACTACCACAATTGGATGGTGTTGAAATAAATTTACCGAAACTGTACCACCTTGTACAACGGCTCGGCGGTCTGGAatcagttatcaataaaaaccGATGGGGCAAGGTCGCAGATGATCTGAAAATTGCCAAGACTGGGATTTATGAGAAAAGATTAGACAACATTTACGTGAAGTTTTTGCTACCATACGACACGCTTTCACATCAGGAACGCCAGGAGATAATGCGGAAAGTAGAGTTGTCGtggaacaaaaaaaatcaaaagcttTTGGACCGCTCCATGAACCCTTTATACCGACAGCAGCGAATGCTCGGCTTGTTGGATTCTTCCGACGAAGAGACAGAAGACGAGAATACTAAGGCTGCTCTCAAACAGGCAGAAGACTGCATCGTCAAAGGTCACGTCATGAGACACAGTCGATTCAAAAAGGTGGCGTCCATGGCGTACGAGAACACGTTCGGGCCGGGATCGGAGGCGGCCTCGCCGGCGCTGTCCAACATCGAGGAGCAGTACTGGCGCATCGTCACGTCGGGCACGGAGCACGTGTGCGTACACACCGCGGCCATCGACACCGGCGAGGAGGGCCACGGCTTCACGACCAGGGAGGAGCCGTATGCCAGCCATCCGTGGAACCCCAAGcaAGTCATCAAGAATCCACGCAACGTACTTCGGTATTTGGGGCCCGTGGTGGGCGTTACGTTGCCCACTCTGCTTCTGGGCATGTTGTTCTCCACCTCGTGCTGGCACAAAGATCCACATGCAGTAGCGTGGTTTGAGTTCCAGAGTTTGGGACCCACCAGAATTTGGTACGGCGTCCCCGCGGACCAGACGGACAACTTCAGGAAGGCTGTAGAAACTCTGTGTCCTACATCGTGCCAGAACAAGGCCCTGTGGCTGTCGTCGGAGATCGCTATGATTCCGCCGAAGGTCCTGGGCGAACACAACGTGCGTCTGACGCGCGTGACGCAGAACGAGGGCGAGTTCATCTTCTCCTTCCCCAACGCCTACACCAGCTGCATCAGCACCGGCTACACAGAGTCCGAGAGCGTGTACTTCGCGTCGTCGGCATGGTTAGACCTCATGTGGAACGCCTTCAAGACAGCACGTGACAGCTGCGAGCCGACGATGTTCTCAATAGAGCAACTTCTCTACAATATATGCCGCGACAAGGAGGCCGAGCAGGACTTGTTGGCgcgcgtgctgccgctgtacgaCAAGATGTTGCGCGAAGAGGTCACCAACCGGCAGATGCTGCAGGAGAGAGGACTTCCTTGCGAGCACCAGCTGCGCGATCAGGCTGAGCAACAGTCGCGCACTGACAGCGCGCGCCTTCTAGAAGAGTGCGATTTCTGCAGGGCTTCACTGTTCCTCTCCAAGGTGAAGGGGCTGCCCGCGCGGAACTCCGTGCTGTGCCTGGAGCACACGCTGCAGCTGCTGGACACGGAGAAGCACAAGGACGCGGATGTGAAGCAGCTGCAGCTGCTGGTGCACGTCAGCGTCAAGGAGCTGCGCAGGGTGCACGACGACATGCGGCGCCGGCAGCGCACCAAGTCTTAG
- Protein Sequence
- METNIQRLRLHSHLTSQPVVLIERLRGRNPVRDVPPPPQTETSPPQRSKSTIKNTAEPPKLHVVRKKQDCNRVHAMSLRSRRVSRLEMNKLLAQSCAPLRKTASKRKKISSDEDEPLIFQKTRIKSPVAAASMSSWEKALKVKSSKDIDVLHKITAKEIKTNQVSSKYIKENSAKKKKSALKRISKECSPKKPLATASAVRKKDLTSARDERVNGASLDNLVTRNDSIVAVNPVIIPDNQAVVSIGPVVVPDDPVIVPVAPAEVLKSPIVVPDDPELGIDALVVIPDHPVALRAPVAPYKSGDFESAEENTEYSVRLDGALAVLEDLTDLDKVSDVDDEPMVRDEPKVREEVHDEVSLNPKDIADQNRRTSSPSSSLVYRWDSSDDEPMVRGDAAVQLPRRTNDSPAPGPSGMQLQLRENNSDIDQDNDDDNTNKLKYLIKKHLISSTVNFGAGRKVQTLPRTCVAAGWRTEQDVINASTEQLDSRCKLCKPCHRIEKLINASTLVKTKIVRGGSSSQYNTSESPENGLEREGETENGEMGIDNRTAAGEKDDGYLRFDVPSGHCNVTMKVRAPVIYGKTILGVNCENSGESSKNKQIQLQGKEHVLDKLIDTLNISQNVKSEGPNVKSIIRSDNPVCRRRSISSDSTETSSDSDTEQEKTRRVRSERKNLKYQKVVATRRRLAEAKGKQDRIRQEKERDIRRIEKKKKDEPSLVEVQISRLNERFEELQKEKAKEIARLKENITVEVRAKMEADRRMCDEVDTMAKTLENEKDAKNMNSRHLDEPGTSESATEGGSLVDAPVFFPTREEFEDPVSFFEKIYAETVKFGICKVVPPAGWSPPSEIHGDIRFDYMNQYISRLFSRWGAAARELAAIKLCLQLHTNINLTRLPQLDGVEINLPKLYHLVQRLGGLESVINKNRWGKVADDLKIAKTGIYEKRLDNIYVKFLLPYDTLSHQERQEIMRKVELSWNKKNQKLLDRSMNPLYRQQRMLGLLDSSDEETEDENTKAALKQAEDCIVKGHVMRHSRFKKVASMAYENTFGPGSEAASPALSNIEEQYWRIVTSGTEHVCVHTAAIDTGEEGHGFTTREEPYASHPWNPKQVIKNPRNVLRYLGPVVGVTLPTLLLGMLFSTSCWHKDPHAVAWFEFQSLGPTRIWYGVPADQTDNFRKAVETLCPTSCQNKALWLSSEIAMIPPKVLGEHNVRLTRVTQNEGEFIFSFPNAYTSCISTGYTESESVYFASSAWLDLMWNAFKTARDSCEPTMFSIEQLLYNICRDKEAEQDLLARVLPLYDKMLREEVTNRQMLQERGLPCEHQLRDQAEQQSRTDSARLLEECDFCRASLFLSKVKGLPARNSVLCLEHTLQLLDTEKHKDADVKQLQLLVHVSVKELRRVHDDMRRRQRTKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -