Lole004222.1
Basic Information
- Insect
- Lacanobia oleracea
- Gene Symbol
- Arid2
- Assembly
- GCA_950371165.1
- Location
- OX493386.1:9152083-9195891[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.4e-20 5.3e-16 60.2 0.0 2 89 17 101 16 101 0.94 2 2 9 5.1e+04 -4.0 0.2 11 33 1017 1038 1014 1041 0.72
Sequence Information
- Coding Sequence
- ATGGCAAAAGCACAAATAAATACGAAATCCAGTAACTATATAAAAGACCGGGAAGGTTTTCTCAAGGAGTTGAAGGAATTCAATGGGAGTAAAAAcctACCTACAAAAGTGCCAATAGTAAATGGCATAGAAATAGATCTGTATCTGTTCTACACATTAGTTCAACAGCGAGGGGGACTTGGAAAggtaAATCAAAATGACACCTGGGAGTCATTCCTACGGCCATTGAGACTGCCACATCCTTGCATCAATGGATCCACACTGCTTAGAAGAATATATGGCTCTTATTTGGAGAAGTATGAGCGAGCAAAAGGCCCACCAGGAAGGGACGATGACAACGACATGGATGAAGACCCGCGGCGCGGTCGCGGCGGTGGCATGCCGCGCATATCCTATGGAGGGGGTACGTACATATCAGCATCAGGTGAGGCGCTGCGCACGAGCTCCCGCGTGGCGGCCGCGTCCGAGAGACTTGCCCTCTCGCTCTTATCGCCGATGCCGAACGAGCAAGACTTCGCTGTCAACGTGTGTACCGTGCTAGCTGCCGACCATTCGAATCGGCTGCCGTTGAGTACTACACCGCATATTCTGGATTTCTTGTTGGCGCATGCTGGGGTTTATAATCATTCGAGTCTCCGCGACACAATCGGCCGCTCCTACTTCGAAGCGCGCGGTCGTTACCCCGACGACTTCTGGAGCCTTCGGGCCGGAGGGGGCGGGGCTAAGGAGCTCGCCGACGAGACCAAGTTCATGCAGCCCGGCGTGGAACAGCCGGACTTCATCGTGCAGGCGCGGGCGGCGTACAATACGCTCACTGATGTGCTGTTGAATGGGCCCGAGGAAGAAGAGGCGGTCGTTGAGAAGGTGTATGAGGATGACATATTAGAAGACTGGGTAACAGAACCGTCCGAGGAGAACCAACTGTTCGCCCCCGAGCTGCCAGGGGGCGCCAGCTGTGTTTACACGCAGCGAGTGCTGCAGGTCGCGTCCATCGTGCGCTCGCTCTCCTTCCACGAAGAAAACGTGCAGTATTTATCTAAGAATACTACGCTTATCAGATTTTTATTGCTATGTGCCAACTCTTGGGTCGGTACACTACGTCAGTCAGGTCTTGACACACTCGGCAACGTGTCTACTGAACTTATAATCAAGGACCCAGCAACATGTTTGATATCCCGACACGTGCTATCAACGATTCAGTCAGCATTAGTATCTCAGGATCGCGCTAGAGTGCTTGCAGCGCTTGAGCTGCTGAACAAACTGGCTCAGAATGAGGTCAATGAAGACGCACTGCTTAAAGCGCTGGAAGCAAAGGTGTACCACGAAGTCTGCGCCCTGCTGACCCTCCGTGATATAATGGTGCTAGTGTGCACGCTGGAGTGCGTGTACGCGCTGACGTCACTGGGCGACCGCGCCAGCGAGAGTGTTGCGAGGGTGCCCGGACTTATACACACACTCGTCTCGCTCGTCACTGTCGAGGCTCAAAGCTACGGCCCTCGCGCTTGTATTCTCATGCGAGTGGTTGAGACAGTGAGTGGACCAAGCGCCATCGCCGCGCAAGCTGAACGGGACGCGCAGGAAAGGCAAACTCAGCAACAGCAAGCGACCACAGCAACCCCCACAAAGCTCGTACAAGAGCCTGTGCAGACGACGCCGGCGACGGCCACCACCGCGCAAGTGTCGTCGCTAGCGCCCGTCTCGTCTATACAGCAGTCGCATCTCCAACAGCGGACCGTTCAGGAAAACGAGCACTTCGCTCAGGCCTGGCTCCGCTCAACCTACGAAGTTCTACCAGCTAATGACAACAGCGCATGCGACGCCAACGACATGTACCGCCAGTATGTGGCGTGTTGCACCAAACTGTCTAGGAAGGGAGTCATCGCGCCTGCACACTTCCCTAGACTAGTCAGAACGGTGTTTGGTGGTACAGTGGGACCAAATACAGTGACGTTATCGACGGGCGAGACTCAGCAAGCGTATATCGGCATCAGATCCAGAGCTACGCAGAATAGGACCAATCCTACTGCAGgaccTTCGTCACCGATACTGAAAGCGCAGCTAACGAATAAGGCGGCAGCTGAAGCGAAACCTGTTGTGACTCAACCACAAGTACAGGCCCAACAGCCGCCCGCTTCGCACCCGCACCTCTCTCAAGCTCTAGAGTCCAGCCCTTCGAACACGACGCTCATCAAGCACTTGTTAGCGCATAAAGTAAGCCCTGCTGTGCCCACGCCGCAAATACATGCTAATCAGCAAGAAGAACTGTTAGTACCGAAAGAAGAGCCAGTACAAATACAAATAGATGAGCAAACACAACTGACCATTAAATCCGCACAAAACAAAATGCTAGCAGACTTACTAAAGAAAAACTCGAATCCTCCACTGCAAGTCGTTCAAATGGGCCCTCAAATCAACGCGCCAACAATCCAAATCACAGAAACGGGCCAAATCGTTCAGGTCAAATCCGACCCGACACCGGTCATACAAATAAACGACTCAGGCCTAGTATCACAAGGAAACCAGTACTTTCAAATAAAGAACGAACAGGGTCAACTCATTCAAATAAAGAACGAACAGGGACAAATCATTCAGTTGAAGAGTGACCAATTGCAAGCGCCGATTCTTCAGTACAAGAATGAACATGGTCAATTAGTTCAGGTGAAGAGTGAAGGACAGATTCAGATTAAAACTGATAAGGATGTTACTGAAACAGTGGTTGCGGATCATTCGTTCACTGAGCCGCCCACTAAGAAAATTAAGGTGGAAGAGAAGaacacgGCACCTCAAGAAAGCGTGTCAAAGACAGCAGCGAATTTGTATGCAGCGCTCGCGGCCTCTGCATTGGAAGATGAAGAGGATTTGTTGCCACCGAAACAAGAGCCTGTTGAAATTGCTCAAACATCGGTTTTGATGGCAGCTGGTGAAAATTCTGTCATCATTCAAGAGCCCATTCTTCAGGTGCAACAACCAACCATGTCGGTGCAACAGCCTGCAATGCAGGTGCAACAACCGACGCTACAGGTCCAACAACCTACGTTACAAGTTCAGGCACCTATGcagCAGCAGACGTTACAAATGCAACAGCCAATGCTACAAGTGCAACCTATggacgttcaaaacattattgCTTCACAGTCCGGACAGCTTATCCTGCAAGAGAAAACAATATCGACTCAACCTACGCAGTATATGCAGCAACAAATGCAGCTCATAGCTACACCGAGCAATTCTCAAGGTGGCATAAGTTACATCACCCAGAATCTCCAAGGGAACATGATGCAGAAAACTATTATCATAGTTCAGGGACCAACCGGTGGAGGACCCCTTACTTTGACGGTGAACAACCCAGGCGGCCTGGACGAGGCGACGCTTAACAGCCTTATTACGCAGGCAACAGAGGCGATAACCCAACAGCAAATTATACAGAACTCGGGTGTGATTCAGTCTACCCAGAGAGTGCTGGCTCAGCCCACGTTAGTGAGTACTTCGCAGGCCATCACGATGGTGAAGAATGCCCTCGCTCAGAATACCCCTCAAATAACGCCAAGCCAGCAACCGATAATTACCAACCCACCACAGCCGCATAAGGCTCAGATCATGAACCAACAGCAACCACAACAGATTATGGTTACACAGAAGCAACCGCCTGCGCTTATTAGTACGTCGACTAGCAGTCAGATTGTGACCAGTAATGCGCAGCTTATACAAgGAAATCAACAACTCCTCCAAGGCAACCAGCAAATAATAGCCGTATCCAATAACCAGCCGATCATAATGAACGCTCCAATGAAGAGCAACGTACACAGAGTAGTTCAGGCACCTCAGAGAAGCCCCGTGGTCACCAGCGTGCAGAGCAACCAGGTTTCTGTTGTCAGTGAGGCGAAGACCAGCGTTATACAGAGTACTCCGCAACCACAGAGAAGCCCCGTGGTCACCAGCGTGCAGAGCAACCAGGTTTCTGTTTGTGAGGCGAAGACCAGTGTTATACAAAGTTGTCCGGTAAGTGTTGTAACCACAGCAACCACAGAGAAGTCCCGTGGTTACCAGCGTGCAGAGCAACCAGGTTTCTGTTTGTGA
- Protein Sequence
- MAKAQINTKSSNYIKDREGFLKELKEFNGSKNLPTKVPIVNGIEIDLYLFYTLVQQRGGLGKVNQNDTWESFLRPLRLPHPCINGSTLLRRIYGSYLEKYERAKGPPGRDDDNDMDEDPRRGRGGGMPRISYGGGTYISASGEALRTSSRVAAASERLALSLLSPMPNEQDFAVNVCTVLAADHSNRLPLSTTPHILDFLLAHAGVYNHSSLRDTIGRSYFEARGRYPDDFWSLRAGGGGAKELADETKFMQPGVEQPDFIVQARAAYNTLTDVLLNGPEEEEAVVEKVYEDDILEDWVTEPSEENQLFAPELPGGASCVYTQRVLQVASIVRSLSFHEENVQYLSKNTTLIRFLLLCANSWVGTLRQSGLDTLGNVSTELIIKDPATCLISRHVLSTIQSALVSQDRARVLAALELLNKLAQNEVNEDALLKALEAKVYHEVCALLTLRDIMVLVCTLECVYALTSLGDRASESVARVPGLIHTLVSLVTVEAQSYGPRACILMRVVETVSGPSAIAAQAERDAQERQTQQQQATTATPTKLVQEPVQTTPATATTAQVSSLAPVSSIQQSHLQQRTVQENEHFAQAWLRSTYEVLPANDNSACDANDMYRQYVACCTKLSRKGVIAPAHFPRLVRTVFGGTVGPNTVTLSTGETQQAYIGIRSRATQNRTNPTAGPSSPILKAQLTNKAAAEAKPVVTQPQVQAQQPPASHPHLSQALESSPSNTTLIKHLLAHKVSPAVPTPQIHANQQEELLVPKEEPVQIQIDEQTQLTIKSAQNKMLADLLKKNSNPPLQVVQMGPQINAPTIQITETGQIVQVKSDPTPVIQINDSGLVSQGNQYFQIKNEQGQLIQIKNEQGQIIQLKSDQLQAPILQYKNEHGQLVQVKSEGQIQIKTDKDVTETVVADHSFTEPPTKKIKVEEKNTAPQESVSKTAANLYAALAASALEDEEDLLPPKQEPVEIAQTSVLMAAGENSVIIQEPILQVQQPTMSVQQPAMQVQQPTLQVQQPTLQVQAPMQQQTLQMQQPMLQVQPMDVQNIIASQSGQLILQEKTISTQPTQYMQQQMQLIATPSNSQGGISYITQNLQGNMMQKTIIIVQGPTGGGPLTLTVNNPGGLDEATLNSLITQATEAITQQQIIQNSGVIQSTQRVLAQPTLVSTSQAITMVKNALAQNTPQITPSQQPIITNPPQPHKAQIMNQQQPQQIMVTQKQPPALISTSTSSQIVTSNAQLIQGNQQLLQGNQQIIAVSNNQPIIMNAPMKSNVHRVVQAPQRSPVVTSVQSNQVSVVSEAKTSVIQSTPQPQRSPVVTSVQSNQVSVCEAKTSVIQSCPVSVVTTATTEKSRGYQRAEQPGFCL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00017962;
- 90% Identity
- iTF_00851501; iTF_00907661; iTF_00951575;
- 80% Identity
- -