Lole035461.1
Basic Information
- Insect
- Lacanobia oleracea
- Gene Symbol
- osa_1
- Assembly
- GCA_950371165.1
- Location
- OX493407.1:9397646-9416019[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.7e-13 3.8e-09 38.3 0.0 2 51 44 93 43 109 0.91 2 2 8.5e-24 4.8e-20 73.2 0.0 10 89 291 367 287 367 0.95
Sequence Information
- Coding Sequence
- ATGTACTGCGCTAGAAGTATTACCTCGTATGTCGTGTGGGTTCCCTCGGGCGGCTATGTGATGAGAGTGTCCCTGCGCCAGAAGTCGGACTCGCTGGGCAAGCTGTACGAGATGGACGACGCGCCCGAGCGGCGCGGCTGGGTGGAGCGCCTGCTGGCCTTCATGGACGAGCGCCGCACGCCCATCGCCGCCTGCCCCACCATCTCCAAGCAGCCGCTGGACCTGTACCGCCTCTACCTGCTCGTGCGCGACCGCGGCGGCTTCGTCGAGGTACGTCAACTATCTGCCCTCCCGAACCTTCATGGACGAGCGCCGCACGCCCATCGCCGCCTGCCCCACCATCTCCAAGCAGCCGCTGGACCTGTACCGCCTCTACCTGCTCGTGCGCGACCGCGGCGGCTTCGTCGAGGTACGTCAACTATCTGCCCTCCCGAACCTTCATGGACGAGCGCCGCACGCCCATCGCCGCCTGCCCCACCATCTCCAAGCAGCCGCTGGACCTGTACCGCCTCTACCTGCTCGTGCGCGACCGCGGCGGCTTCGTCGAgcgtcagtcgtacaacgactaTCGTACGTCAACTATCTGCCCTCCCGAACCTTCATGGACGAGCGCCGCACGCCCATCGCCGCCTGCCCCACCATCTCCAAGCAGCCGCTGGACCTGTACCGCCTCTACCTGCTCGTGCGCGACCGCGGCGGCTTCGTCGAGGTACGTCAACTATCTGCCCTCCCGAACCTTCATGGACGAGCGCCGCACGCCCATCGCCGCCTGCCCCACCATCTCCAAGCAGCCGCTGGACCTGTACCGCCTCTACCTGCTCGTGCGCGACCGCGGCGGCTTCGTCGAGGTACGTCAACTATCTGCCCTCCCGAACCTTCATGGACGAGCGCCGCACGCCCATCGCCGCCTGCCCCACCATCTCCAAGCAGCCGCTGGACCTGTACCGCCTCTACCTGCTCGTGCGCGACCGCGGCGGCTTCGTCGAGGTGACGAAGAATAAGACGTGGAAAGACATTGCGGGCTTGTTGGGCATCGGTGCTTCGTCTTCCGCGGCGTATACGCTTCGCAAGCACTACACGAAGAATCTGCTCGCGTATGAGTGCCACTTCGACCGCGGTGGCATCGACCCACAGCCGATCATCAACCAAGTTGAAGCTTCCACGAAGAAAAAGAGCGGCAAATCCAATAGTACGTCTAGTACAGGGTCGTCAAACTCGCAAGAGTCGTTCcccgcgggcggcgcgggcggcgcgggcggcggggggGGCGCGCCCATGGACGGCTACGGCGCGCAGTACGCCGGCTACCCGCCGCAGCCCAACCACTCGCAAGGCGGCGGGCCGGGCGGCGACAACCTTGCCGCCTCCAACCCCTTCGACGAGCCGCCGGGGCCCAGGAGACCCCCAGGTTACCAACAAGGTTACGGGTATGAATATGGATCTCCTTACCAGCCGAATAGGCCTGTTTATCCTCCTTATGGTCCCGATGGCGATAGCAGAGGGTACCGAGGCGGCGCCGTGGGCGCGGTGggggcgggcggcggcgcgggcgcggtggGCGGCCCGGGCGGCGCCGACTACCAGCAGTACGGCTACGGCGGCGCCTACCGaggcgccgcgcccgcgcccgccacgccgccgcccgcgcagccCTACCCCGACTACTACCGCGCGCCGCACCCGCAACACCCGCAGCACCCGCAGCACCCGCAGCACCCGCACCCGCCGCACCCGCAACACCCGCCGCACCCGCAGCACCCCCAGCATCCGCCGCATCCGCCCATCTCGCCGCAGCAGCCGCCGCACGAGATGTCGGGCGGCGCGCCGGCCGTCAGTAACTTATTGAACTCGCAGCTGGCGCGGCAGCTGGTGGCGCCGCTGTCGCCCGCTCCGCGGCCCTACTACGGCGGCGGCAAAGCGCTGCCAGGCGCCCCCGCGGCCGCCGGCGCGCCTCGGAGACATCCCGACTTCGCGAAAGGAGAGCCCGCCTACGGGGGCGGCGGCGGACAGGGCGCCGCGGGCGGGCCCccgggcggcgcggcgggcgcccCGGGGCCTGGCGCCGGCGCCAGGTTTGGCGGCGCCTGGGGCGGCCAGTTcccccgcgcgcccgcgccgcccgcgcccgcagCCCCGTGGCGACCGCAGCCTGGCGCGCCGCAGCCGCCCAACTGGACGCATCCGCCCTACTCCAATACGCAGAGCGGAGGTCCTGCGTGGGCAGGTGCGCCGCGGCCACCGACGCAAGACCCCTACAACTCCACCGCGCCCTCATCGGGCACGGCGCCAGTTATGACTGCCCCCGGACAATTAAAACGGGAGCTAACATTCCCTGCCGAGTGCGTGGAGGCGGCCGTGCCGACCGGCGAGAAGCGGAGACGCCTCACCAAGGCGGACGTGGCGCCCGTGGACGCGTGGCGGATCATGATGGCGCTCAAGTCCGGCCTGCTGGCCGAGACGTGCTGGGCGCTCGACATCCTCAACATCCTCCTCTTCGACGACAACTGCATAGGATACTTTGGCCTCCAGCACATGCCCGGCCTGCTCGACTTATTACTTGAACACTTCCATAAAAGTCTAAGCGACGTGTTCGACGCGCCGTCGAACGAAGACGGGCCCTGGTACGCGCCGCCAGCAAGTCCCGAACCAGTGATCAAGAGCGCGAAAACAACGAGAGAACCGCGCGAGCCGCCCGACCCGGCCGACCGAGTGCGCTTCCTCAGCGGAGAGAACTACACGCTGGAGTCGCGGCGGCGGCACCCCGTCGTCTACAGGCCCGACGACGAGCTGTTCGCGCCCGACGACGACGACGCGGCCGAGCAGGCGCACCACGACGTGCTGGAGCCCTGGCACACGGGCGGCGAGCCGGGCGGCGCCGCGCACGTGCTGCCCGTGTTCCGCGCCGAGTTCCTGCACCTGCCCTTCGTGCGCGTCATgcccggcgcgcgcgcgccctcgccgcccgccgcgccgcgcgcgcgctcgccCTCGCCGCCCGCGCCCTCGCCGCCCGCCGGGCCGCCCTCGGGCGACAACCTGGCGCCCGAGCCCATGGAGCTggagccgcgcgccgccgcgctgcAGGTGCGCGACCCGGCCGGCGTGCTGCGGCGCCGCCGCCTGCACGACTACGAGGACGAGTGCTACACGCGCGACGAGCCCAGCCTCAACCTCGTGGACGACACGCGCGACGCGCTGGCGCGCCGCTGCATCGCGCTCTCCAACATCCTGCGCGGCCTCACCTTCGTGCCCGGCAACGAGGCCGAGTTCAGCCGCTCCGGCGCCTTCCTGGCGCTGGCGGGCAagctgctgctgctgcaccACGAgcacgcgccgcgcgccgcccgcgcccgcgcctaCGAGCGCGCCGCGCGCGACGAGCACGACCAGGCCGCCTGCTGCTCGTCGCTGCGCGGCGGCGCCGAGTGGTGGTGGGACGCGCTGGCGCAGCTGCGCGAGGACGCGCTCGTGTGCTGCGCCAACATCGCGGGCGGCGTGGAGCTGGCGGGGCAGCCCGAGGCCGTGGCGCGGCCGCTGCTGGACGGCCTGCTGCACTGGTCCGTGTGCCCGGCCGCCGTGGCCGGcgacgcgccgcccgccgccggcgccgcgtCCCCGCTGTCGCCGCGGCGCCTGGCCCTGGAGGCGCTGTGCAAGCTGTGCGTGACGGACGCCAACGTGGACCTGGTGCTGGCCACGCCGCCGCGCGGGCGCATCGCGGCGCTGTGCGCGGGGctggcgcgcgacctgtgccgGCCCGAGCGGCCCGTGGTGCGCGAGTTCGCCGTCAACCTGCTGCACTACctggcgggcgcgggcggctGCGCGGCGCGCGAGGTGGCGCTGCACGCGCCGGCCGTGGCGCAGCTGGTGGCCTTCATCGAGCGCGCCGAGCAGACGGCGCTGGGCGTGGCCAACCAGCACGGCGTGGCGGCGCTGCGCGACAACCCCGACGCCATGGGCACGTCGCTGGACATGCTgcggcgcgccgccgccacGCTGCTGCGCCTGGCCGAGCACCCCGAGAACCGGCCGCTGATCCGGCGCCACGAGCGCCGCCTGCTGTCGCTCGTCATGTCGCAGATCCTGGACCAGAAGGTGGCGCACGAGCTGGCGGACGTGCTGTTCCACTGCAGCCAGGCGCGCGCGGACGCGGAGTGA
- Protein Sequence
- MYCARSITSYVVWVPSGGYVMRVSLRQKSDSLGKLYEMDDAPERRGWVERLLAFMDERRTPIAACPTISKQPLDLYRLYLLVRDRGGFVEVRQLSALPNLHGRAPHAHRRLPHHLQAAAGPVPPLPARARPRRLRRGTSTICPPEPSWTSAARPSPPAPPSPSSRWTCTASTCSCATAAASSSVSRTTTIVRQLSALPNLHGRAPHAHRRLPHHLQAAAGPVPPLPARARPRRLRRGTSTICPPEPSWTSAARPSPPAPPSPSSRWTCTASTCSCATAAASSRYVNYLPSRTFMDERRTPIAACPTISKQPLDLYRLYLLVRDRGGFVEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEASTKKKSGKSNSTSSTGSSNSQESFPAGGAGGAGGGGGAPMDGYGAQYAGYPPQPNHSQGGGPGGDNLAASNPFDEPPGPRRPPGYQQGYGYEYGSPYQPNRPVYPPYGPDGDSRGYRGGAVGAVGAGGGAGAVGGPGGADYQQYGYGGAYRGAAPAPATPPPAQPYPDYYRAPHPQHPQHPQHPQHPHPPHPQHPPHPQHPQHPPHPPISPQQPPHEMSGGAPAVSNLLNSQLARQLVAPLSPAPRPYYGGGKALPGAPAAAGAPRRHPDFAKGEPAYGGGGGQGAAGGPPGGAAGAPGPGAGARFGGAWGGQFPRAPAPPAPAAPWRPQPGAPQPPNWTHPPYSNTQSGGPAWAGAPRPPTQDPYNSTAPSSGTAPVMTAPGQLKRELTFPAECVEAAVPTGEKRRRLTKADVAPVDAWRIMMALKSGLLAETCWALDILNILLFDDNCIGYFGLQHMPGLLDLLLEHFHKSLSDVFDAPSNEDGPWYAPPASPEPVIKSAKTTREPREPPDPADRVRFLSGENYTLESRRRHPVVYRPDDELFAPDDDDAAEQAHHDVLEPWHTGGEPGGAAHVLPVFRAEFLHLPFVRVMPGARAPSPPAAPRARSPSPPAPSPPAGPPSGDNLAPEPMELEPRAAALQVRDPAGVLRRRRLHDYEDECYTRDEPSLNLVDDTRDALARRCIALSNILRGLTFVPGNEAEFSRSGAFLALAGKLLLLHHEHAPRAARARAYERAARDEHDQAACCSSLRGGAEWWWDALAQLREDALVCCANIAGGVELAGQPEAVARPLLDGLLHWSVCPAAVAGDAPPAAGAASPLSPRRLALEALCKLCVTDANVDLVLATPPRGRIAALCAGLARDLCRPERPVVREFAVNLLHYLAGAGGCAAREVALHAPAVAQLVAFIERAEQTALGVANQHGVAALRDNPDAMGTSLDMLRRAAATLLRLAEHPENRPLIRRHERRLLSLVMSQILDQKVAHELADVLFHCSQARADAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -