Lole010540.1
Basic Information
- Insect
- Lacanobia oleracea
- Gene Symbol
- -
- Assembly
- GCA_950371165.1
- Location
- OX493389.1:29294115-29295491[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6e-05 0.054 15.0 0.9 26 59 148 181 146 184 0.84 2 2 3e-05 0.045 15.2 0.5 26 59 264 297 262 301 0.86
Sequence Information
- Coding Sequence
- ATGTCTTCGGACAGAGTGGGGTCGGTGAGTCTCTCCTCAAGCGAAGAGAACCTGCCGGCTGCTAAAGTGGCAACAACGAGGAGAGGCCGGGGTCGAGCGACGGCGAGCGGAGCTTACGCTAATCTGCCAGGGCGTGACGTACGGGGTCGCTTCAAGCGGCCCGATATGACGGGAATTGGCGGGGAGAGTGATCCCGGAGTCTCATCAGGGGTCTCCATTGAGGAGCCGGGAGGAGTCTCCGTCTCTCTCGTAGGCACGAGGGTGGGTGGCGGCTCCGATCTAGATTTGGAGCGGAAGGCCAGGTTTGAGGAGGttgtgaaggccgcgatccgcgatgtagctttgaagaggtcgcagATCTCCAAAAACAtggctataagtgcggcctcggcctccattttggcggcagcggaggctaactattgcgggcttccgtcggacgaaatgtccaagctgcaggcggaggtcgctcgcttgacggccgcaacggagcttctccaaaagcagaatgagaagctccgagcagacctggccgggctccgaggagtcTCATCAGGGGTCTCCATTGAGGAGCCGGGAGGAGTCTCCGTCTCTCTCGTAGGCACGAGGGTGGGTGGCGGCTCCGATCTAGATCTGGAGCGgaaggccaggtttgcggaggttgtgaaggccgcgatccgcgatgtagctttgaagaggtcgcagATCTCCAAAAACAtggctataagtgcggcctcggcctccattttggcggcagcggaggctaactattgcgggcttccgtcggacgaaatgtccaagctgcaggcggaggtcgctcgcttgacggccgcaacggagcttctcaaaaagcagaatgagaagctccgagcagacctggccgggctccgaggaggcGCCTCAAagggggcgcaagcacgggcaggCCGTGTCAGCGGAGGAGCAGGTCTTGCATCTGGTGCGGCACGAGATGGCTACATTCGCGCAAAGGTTTTCggtcctggagggcatcgtcctgcgccccccactagcgaCGAACCAAAAGGCATCGGGCCAGCTgaaggcggcctcgtacgcGGCCGCCGCGGGTGCCAAACTGAGGTCGaccggtcaggccaaccgaggggccggaccagcacccaCGAAACCGGCAACCGCGAAGCAAGTCaagcagaagaagaaaggtggggcggctgcacaggtgGTGAAGACTCAAGCGCCAGCAGTGCAACCGGCACCCCCGCCTTCCAAGTCTCCTGcggcggccgaagccggatggcaagtggtcggggaaaagaggaaggcgggcaagacagccagggcggccaagaaacgtcagaggaggcggcagcgcaaagcgcgaagcgtcgcggctag
- Protein Sequence
- MSSDRVGSVSLSSSEENLPAAKVATTRRGRGRATASGAYANLPGRDVRGRFKRPDMTGIGGESDPGVSSGVSIEEPGGVSVSLVGTRVGGGSDLDLERKARFEEVVKAAIRDVALKRSQISKNMAISAASASILAAAEANYCGLPSDEMSKLQAEVARLTAATELLQKQNEKLRADLAGLRGVSSGVSIEEPGGVSVSLVGTRVGGGSDLDLERKARFAEVVKAAIRDVALKRSQISKNMAISAASASILAAAEANYCGLPSDEMSKLQAEVARLTAATELLKKQNEKLRADLAGLRGGASKGAQARAGRVSGGAGLASGAARDGYIRAKVFGPGGHRPAPPTSDEPKGIGPAEGGLVRGRRGCQTEVDRSGQPRGRTSTHETGNREASQAEEERWGGCTGGEDSSASSATGTPAFQVSCGGRSRMASGRGKEEGGQDSQGGQETSEEAAAQSAKRRG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -