Lmin010233.1
Basic Information
- Insect
- Labia minor
- Gene Symbol
- stc_1
- Assembly
- GCA_963082975.1
- Location
- OY720345.1:37642740-37646254[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 1.2 2.4e+04 -3.4 1.1 15 18 190 193 189 194 0.81 2 18 1.7 3.3e+04 -3.9 1.6 15 19 221 225 220 225 0.81 3 18 0.028 5.4e+02 1.8 1.1 2 10 252 260 252 260 0.94 4 18 3.9e-06 0.076 14.1 14.0 4 18 268 282 266 283 0.95 5 18 0.0038 74 4.6 17.4 1 19 318 336 308 336 0.85 6 18 0.41 8e+03 -1.9 1.2 8 13 341 346 340 347 0.80 7 18 0.7 1.4e+04 -2.7 1.0 3 7 367 371 365 373 0.54 8 18 1.7e-09 3.4e-05 24.8 11.2 1 19 376 394 376 394 0.96 9 18 2.8e-07 0.0053 17.8 14.6 1 19 437 454 437 454 0.97 10 18 0.82 1.6e+04 -2.9 1.6 5 10 480 485 480 485 0.93 11 18 0.011 2.2e+02 3.0 9.1 1 11 491 501 491 502 0.96 12 18 0.048 9.2e+02 1.1 1.1 4 10 506 512 505 512 0.92 13 18 4e-10 7.6e-06 26.9 14.2 1 19 518 536 518 536 0.98 14 18 1.9 3.7e+04 -4.0 1.4 6 10 565 569 564 569 0.83 15 18 2 3.8e+04 -6.3 13.1 1 19 575 593 575 593 0.78 16 18 0.13 2.6e+03 -0.4 1.2 7 13 597 603 597 604 0.86 17 18 0.0072 1.4e+02 3.7 15.9 1 16 629 644 619 654 0.87 18 18 3.1e-06 0.06 14.4 16.9 1 19 661 680 661 680 0.97
Sequence Information
- Coding Sequence
- ATGCAAGACTGGAATCAAGAATCAGTAAATTCCACCCTGACACCAAATGCCCGAGAATTCTATCCTCGGGGAAGAAATTATAACCATCATCATTCATCTCGTGGATCCAATTATAGCAgATCTAATCATCAAAATTCTTATGATCACCGGCGAGGAAACGGATTCCATTGGTCATTTCGACGAAACAATGGCAATGGCGGATTTTCAAACAACAATAGTCATGATGAAGAAAGGCGTAGACTTTTAGCGGATACTGCTCGCTTTCTTTCTAATAGTTCTGAACCAAATATTTCTGGGAATCAAAgagattttcaatcttcaaataatCCTAGGAATAATGGACGAGGGTATCGCTTTAACCGAAATAATAGAGGATCAAATTACAATCCACCTTGTAACAGAAATACCCGTGGAAATAGCAATAGTAACTTTCGCCGAATAGATGATCAGAGACCTGGACCAGATGAAGAAACTCAAAGAGAACGCTTAGCAGAGGAATTAAATCGAGGAGTACTTGAATGTTTGGTATGTTGTGAACGAATTCGTCAACAGCAACCAATATGGAGTTGTCCTAATTGCTATCATGTACTTCATTTAAATTGTGTAGCTCGATGGGCTAGAGCCTCATCTCAAGATCAAGATACATATATCGGTTGGCGTTGTCCAGCATGTCAACATTTATCTAATCAAATACCCACAGAGTACCGTTGTTATTGTGGAGCAATTCAAGATCCTCAATATGATCCTTCATCTGGTGCCCATTCTTGTGGCCAACTTTGTCAACGTTTTTCTAATTGCCCACATCGTTGCAAATTATTATGTCATCCAGGACCATGTCCCAAGTGTATCACATTTGTTTCAAGAAAATGCGGTTGTGGAAAAATAGAACGTCGAGTTAGATGTTCAGATGGACCTATTCTTTGCGGAGAAATCTGTGGCAAATTATTAGAATGTAAAATTCATAATTGTACACACACATGCCACAATGATTCTTGTCCCCCGTGTCAAGAGATTGTTTCACAAACATGTCATTGTGGAAAAGCCACTAGAGATTTACCTTGTACTTCTGAAACCGCAAATGAGAAATCTTATTCATGTCAACACTTATGTGAAAAAGTACTTTTATGCGGAAATCATAAATGTGATCAACTATGTCATTCAGGAAATTGTAATCTTTGTTCTAAATTACCTTCACTAGTTAAAGAATGTCCTTgcggaaaaaaacaatttaactcTGATGAAACTCCTCGAAATTCTTGTTTGGATCCTATACCAAGCTGTGGGGAACCCTGCTTTAAGGAATTAAGTTGTGGTCATCTTTGTCCAGAAATATGTCATGAGGGACCATGTGCTCCATGTACAAGATCTACTCCAGTACGTTGCCGATGTGGAAATATAGAACGAGAAATCCCTTGCGATGCTGGATCCCGTGATTTACGATGCGAAAGAAAATGTACAAAAAAGAGAGCTTGTGGCAAACATAAATGTGGTCAAGCATGCTGTATTGATTTAGAACATACTTGTCCATTACCATGTAATCGTCCTCTACCTTGTGGAAACCATCGTTGCGAAGAGCTTTGTCATCGTGGTCATTGCAAGCCGTGCTGGAGAATTAGTTTTGATGAATTGCGATGTGAATGTGGATTTAGTGTAGTATATCCACCAGTTCCTTGTGGTACTCGACGTCCCCAATGTTCAAAGCCATGTAGTAGAGAACATGCTTGCGGTCATCCTCCACTTCATACATGTCATTCAGAAAGTGAATGTCCACCATGTACAGTTCTAACTGAACGCCTTTGTCATGGAGGGCATGAATTACGTAAGGCAGTTCCATGTCATGTAGAATCAATTTCCTGCGGAAGACCTTGTGGAAAACCTTTATCATGTAATCGTCATCATTGTATTACAATTTGTCATGCAGGACCATGTTTAACAGCAGGTAAAATATGTCAACAACCCTGTAATATTCCACGACAAGATTGTGGACACCCTTGTGCATCTCCATGTCATGATGGACCATGTCCAGATACTCCCTGTAAACAATTAGTTAAAGTTACCTGTCCTTGTAAGCATCGTTCTGCTTCAAGGGTTTGTGCTGATAATGCTTCTGAATATAAGCGGCTAGCAATGGTTCAACTTGCATCAAAAATGTCTGATCTATCTTTGGGATTATCTGTTCCGATCGGTAATGCGAGCTCTAACAGTATTTCTGCGAATGCATTATTAGCAAATGGCCTTATGACTTTAGAATGCAATGATGAATGTAAAATAGTTGAACGAAATAGACGTATGGCAATtggattacaaattaaaaatcctGATTTAAGTGCAAAATTAACACCCAGATACTCGGATACAATGAGAAATTGGGCTAAAAGAGACCCTAATTTTTGTCGAGAGATACATAATCGGTTAGAGCAATTAGTTACCCTTGCCCAAAATTCTAAACAAAAAAGTCGAAGTCATTCTTTCGAAACCATGAACCGTGAGAGAAGGCAATTTGTTCATGAATACTGTCAACATTTTGGTTGTCAATCAGAAGCATATGACCCTGAACCGAAAAGAAATGTTGTAGCCACCGCACTTAAAGATAAAGCCTGGTTGCCAGCTTTAAGTCTATTAGAAGTAGTTGAACGAGAAGAAGGCAAACGACGCATCCCAAGACCTGTTATGGCTTTAGACAAAGGTTCTTCAATGCCAAAATCATCTATGGATGTTCTTGTTCATAGACAAACAGCCCAAAATCCAACAGTTGATTCAAACATTGACTACTTTGATATGAAACCAAGGAATtag
- Protein Sequence
- MQDWNQESVNSTLTPNAREFYPRGRNYNHHHSSRGSNYSRSNHQNSYDHRRGNGFHWSFRRNNGNGGFSNNNSHDEERRRLLADTARFLSNSSEPNISGNQRDFQSSNNPRNNGRGYRFNRNNRGSNYNPPCNRNTRGNSNSNFRRIDDQRPGPDEETQRERLAEELNRGVLECLVCCERIRQQQPIWSCPNCYHVLHLNCVARWARASSQDQDTYIGWRCPACQHLSNQIPTEYRCYCGAIQDPQYDPSSGAHSCGQLCQRFSNCPHRCKLLCHPGPCPKCITFVSRKCGCGKIERRVRCSDGPILCGEICGKLLECKIHNCTHTCHNDSCPPCQEIVSQTCHCGKATRDLPCTSETANEKSYSCQHLCEKVLLCGNHKCDQLCHSGNCNLCSKLPSLVKECPCGKKQFNSDETPRNSCLDPIPSCGEPCFKELSCGHLCPEICHEGPCAPCTRSTPVRCRCGNIEREIPCDAGSRDLRCERKCTKKRACGKHKCGQACCIDLEHTCPLPCNRPLPCGNHRCEELCHRGHCKPCWRISFDELRCECGFSVVYPPVPCGTRRPQCSKPCSREHACGHPPLHTCHSESECPPCTVLTERLCHGGHELRKAVPCHVESISCGRPCGKPLSCNRHHCITICHAGPCLTAGKICQQPCNIPRQDCGHPCASPCHDGPCPDTPCKQLVKVTCPCKHRSASRVCADNASEYKRLAMVQLASKMSDLSLGLSVPIGNASSNSISANALLANGLMTLECNDECKIVERNRRMAIGLQIKNPDLSAKLTPRYSDTMRNWAKRDPNFCREIHNRLEQLVTLAQNSKQKSRSHSFETMNRERRQFVHEYCQHFGCQSEAYDPEPKRNVVATALKDKAWLPALSLLEVVEREEGKRRIPRPVMALDKGSSMPKSSMDVLVHRQTAQNPTVDSNIDYFDMKPRN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -