Lmin020114.1
Basic Information
- Insect
- Labia minor
- Gene Symbol
- nfxl1_1
- Assembly
- GCA_963082975.1
- Location
- OY720347.1:21565905-21576629[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 1.7 3.2e+04 -3.8 3.2 14 19 153 158 153 158 0.87 2 22 0.13 2.5e+03 -0.3 0.4 4 10 189 195 188 195 0.95 3 22 3.2e-07 0.0061 17.6 15.0 1 19 203 220 203 220 0.99 4 22 0.69 1.3e+04 -2.6 0.8 6 10 246 250 245 250 0.89 5 22 6.2e-11 1.2e-06 29.5 16.8 1 19 256 274 256 274 0.99 6 22 0.71 1.4e+04 -2.7 0.7 5 10 298 303 298 303 0.93 7 22 9.2e-08 0.0018 19.3 16.8 1 19 309 327 309 327 0.99 8 22 1.4 2.8e+04 -3.7 0.3 5 10 352 357 352 360 0.67 9 22 0.00027 5.1 8.3 12.4 1 18 363 380 363 381 0.91 10 22 0.74 1.4e+04 -2.7 0.5 1 5 390 394 390 399 0.73 11 22 0.028 5.3e+02 1.8 15.9 3 19 417 433 415 433 0.91 12 22 1.4e-10 2.8e-06 28.3 13.7 1 19 442 460 442 460 0.98 13 22 2 3.8e+04 -5.0 1.9 10 13 467 470 466 471 0.71 14 22 2 3.8e+04 -7.2 7.6 3 11 492 502 491 503 0.70 15 22 0.00021 4 8.6 6.7 9 19 510 520 509 520 0.92 16 22 0.011 2.1e+02 3.1 6.6 1 12 530 540 530 540 0.89 17 22 2 3.8e+04 -5.2 3.5 14 18 569 573 569 574 0.85 18 22 0.00024 4.7 8.4 6.4 1 12 610 621 610 621 0.97 19 22 1.8 3.4e+04 -3.9 0.5 14 18 635 639 635 640 0.78 20 22 0.66 1.3e+04 -2.6 19.2 1 18 651 668 651 669 0.83 21 22 2 3.8e+04 -6.2 2.6 9 13 675 679 675 679 0.70 22 22 1.2e-06 0.024 15.7 10.9 1 16 712 726 712 732 0.92
Sequence Information
- Coding Sequence
- atggcTGGTTTAGGACGACCTAAAAAAAATCCATGGGAAAAAAATGGTAATACAGATTTGAAAAATGCTcaatcaaaatttttacaagCTCAAGCTCAAATGCAAGCCAATATTAAAAAGCATATTACCAAGGGCTATGAATCTTCATCCGAGGAAGAAGATCTTGAAACCGATAATAtcttaaaatccGTACTTTCGACTTATTCCCAGAAAGGTGGAAATGTGGGTGATCTTGGAAGAACACAAAAATATCTTGAAGATGCATTTCAATCTGGTGCTGCTATTTGCCTTATATGTATAGGAACAGTAAAACGCACAGATTCAatttggaATTGTATTGAAtgcttttgtttttttcatttacaatgTATCCAAAGATGGGCCAAAGATAGTATATTCCATCTGAAACAATCCCTTGAAGAATCAAACACtaacaaaataattgattttaagtgGCCGTGtccaaAGTGCAGACATGACTATTCTGACAAAGAAATACCAAAAATCTATTTATGCTTCTgtggaaaaattgaaaatcctgAATTCCATCCTTGGAATATTCCTCATTCATGTGGAGAAATATGTGGAAAACCTCTTTTGCCTGTTTGTGGTCATGATTGTTTACTTTTATGTCACCCAGGACCATGTCCATCTTGTCCAAAGATTGTCAATACAAAATGTTTTTGTGGAAAATCGGCTGCTGTGCCACGAAGATGTTGTGTCAAAGAATGGTCTTGTAatcaattatgtttaaaaaaattaagttgcgGAAAGCATACATGTCAACAACTTTGTCATGCTGGACAATGCCCACCTTGCCCGAAGGAAAGTATGCAACCATGTAAATGTGGGTCTAATAAAAAGAACAGACCCTGTGCTGACCCTCATTGGAAATGTGATGAGatttgTAGTAAACCTTTGAAATGTGGACATCATAATTGTGCTGAAATATGTCATGAAGCCCCATGTCCTCCTTGTCCCTTATCTGTTGGTCGATATTGCCCTTGTGGTAAAATTCCATATCAACTTCCTTGCACTGAACAAAATACACCTACTTGTGGAGATACATGTGCAAAATTATTGGAATGTGAACGACATAAATGCTCAAGACCTTGTCATCGTGACAAATGTggacaatgTCTTGAAGTTGTAACAAAATACTGCAATTGTGGTTTACATCAAAAAGAATTACCAtgttataaagattttttttgtgaaacgAAATGTAAAAAACTAAGAGATTGTAAAAAACATCCATGCAATCGAAggtGTTGTGATAGTAATTGCCCACCATGTACTAAATCTTGTCTTCAAACTTTACCTTGTGGAAATCATAAATGCACCAGCGTATGTCATCGTGGACCATGCTATCCTTGTCAATTAACTGAATCTATTAAATGTCATTGTGGACGCACTGAAAAGATTGTGCCTTGTGGTCGAAAAAGAATAGCACGCCTCAATCCTCCACGATGTCAACATTCATGCgaATATCCTTCTAAATGTCATCACGAAAAACAAGAATTTCATAAGTGTCATTTTGGTGATTGTCCTCCCTGTCGTCAAATATGTAACCAAACCCGCTCAACTTGCTCGCATAAATGTTCTGCTTCGTGTCATACCTCTGTAAtggttcaaattaataaaaattttaaacctgCTGGACCTTGGGAAAGTAATGCACCAATCTATAAACTGCAAAAATTGCCTTGTCCTGATTGTGaggtCCCTGTACCAATTACTTGTCTTGGAGAACATGAAACTGTTGATTTACCATGTTATCGTGCAGTACCATCTTCATGTGGGAGACCCTGTGGTCGGCTTTTAAAATGTGGCAACCATAAATGCACGATGGATTGtcataaatttccaaaaattacCTCAAATAATCAAgagaaagttGTTGAATGTGAATCGTGTGATAAAAGTTGTGAACGGATTCGCCCGAAAGGATGTTCACATCCATGTCCTGATCAAATTTGTCATCCCCATCCATGTCCACCATGTGAAAAAACTTCACGCCATATTTGTCATTGTGGAATTGGTcaagtttttataaaatgtactcAGTGGACAGCGACAGAGGATCATGATAATCTTTTAAGTTGTGGAAACCAGTGTCCCAAACAGtttgaaTGTGGTCATCGATGTCGGTCGATTTGCCATTCAGGAAAGTGTCCCAATCCAGAATTATGCCGAAAAAGAGTTAAATTGTATTGCCCTTGCAAAAGATTAAAACGTGAAATACCATGTGATTTAATACAACAAAAACACCCTGATGCAAAAATCGAATGTGACAATATAtgtaaagaaaagaaagaacaagaaaaaaaggctaaagaagaagaaaatttaaagagaattttagaagaagaaaaacgAAATAAAGAAGAACtcgaaaaatttgaaaagaaattccaaaataaaaagaagTATCccGTTTATTATTTAACGTTTCTTGGTATTGTCGTTTTCGGTCTTCCTGAAAAAGAAGTAAGTATTGGATTTCATGAACCAGTTGGGCCTTGTAATGAGTATACATCATTAAGGACAGCTTTCGGATcgaaataa
- Protein Sequence
- MAGLGRPKKNPWEKNGNTDLKNAQSKFLQAQAQMQANIKKHITKGYESSSEEEDLETDNILKSVLSTYSQKGGNVGDLGRTQKYLEDAFQSGAAICLICIGTVKRTDSIWNCIECFCFFHLQCIQRWAKDSIFHLKQSLEESNTNKIIDFKWPCPKCRHDYSDKEIPKIYLCFCGKIENPEFHPWNIPHSCGEICGKPLLPVCGHDCLLLCHPGPCPSCPKIVNTKCFCGKSAAVPRRCCVKEWSCNQLCLKKLSCGKHTCQQLCHAGQCPPCPKESMQPCKCGSNKKNRPCADPHWKCDEICSKPLKCGHHNCAEICHEAPCPPCPLSVGRYCPCGKIPYQLPCTEQNTPTCGDTCAKLLECERHKCSRPCHRDKCGQCLEVVTKYCNCGLHQKELPCYKDFFCETKCKKLRDCKKHPCNRRCCDSNCPPCTKSCLQTLPCGNHKCTSVCHRGPCYPCQLTESIKCHCGRTEKIVPCGRKRIARLNPPRCQHSCEYPSKCHHEKQEFHKCHFGDCPPCRQICNQTRSTCSHKCSASCHTSVMVQINKNFKPAGPWESNAPIYKLQKLPCPDCEVPVPITCLGEHETVDLPCYRAVPSSCGRPCGRLLKCGNHKCTMDCHKFPKITSNNQEKVVECESCDKSCERIRPKGCSHPCPDQICHPHPCPPCEKTSRHICHCGIGQVFIKCTQWTATEDHDNLLSCGNQCPKQFECGHRCRSICHSGKCPNPELCRKRVKLYCPCKRLKREIPCDLIQQKHPDAKIECDNICKEKKEQEKKAKEEENLKRILEEEKRNKEELEKFEKKFQNKKKYPVYYLTFLGIVVFGLPEKEVSIGFHEPVGPCNEYTSLRTAFGSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -