Basic Information

Insect: Labia minor
Gene Symbol: lola_5
Assembly: GCA_963082975.1
Location: OY720349.1:67763063-67792724[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0035 0.55 11.8 5.1 1 21 57 77 57 78 0.93

2 17 0.00046 0.072 14.6 7.7 1 21 86 106 86 109 0.95

3 17 2.3e-05 0.0037 18.7 1.2 2 21 120 139 120 140 0.94

4 17 0.00089 0.14 13.7 4.1 1 23 148 171 148 171 0.95

5 17 0.00077 0.12 13.9 4.3 1 21 181 201 181 202 0.96

6 17 0.055 8.6 8.1 6.8 1 23 210 233 210 233 0.96

7 17 7.6 1.2e+03 1.3 0.4 1 8 789 796 789 806 0.88

8 17 0.00015 0.024 16.1 2.0 1 23 816 838 816 838 0.98

9 17 0.0008 0.13 13.9 5.1 1 22 869 890 869 890 0.96

10 17 0.00051 0.08 14.5 2.1 1 23 898 921 898 921 0.95

11 17 0.0085 1.3 10.6 5.2 1 21 931 951 931 952 0.97

12 17 0.034 5.4 8.7 3.1 1 23 1005 1027 1005 1027 0.97

13 17 2.1e-05 0.0034 18.8 1.9 1 21 1035 1055 1035 1056 0.96

14 17 0.047 7.4 8.3 3.4 1 21 1080 1100 1080 1101 0.94

15 17 0.0042 0.66 11.6 3.3 1 23 1109 1132 1109 1132 0.96

16 17 2.3 3.6e+02 3.0 5.4 1 21 1142 1162 1142 1163 0.95

17 17 0.0037 0.58 11.8 0.7 3 23 1173 1194 1171 1194 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0035	0.55	11.8	5.1	1	21	57	77	57	78	0.93
2	17	0.00046	0.072	14.6	7.7	1	21	86	106	86	109	0.95
3	17	2.3e-05	0.0037	18.7	1.2	2	21	120	139	120	140	0.94
4	17	0.00089	0.14	13.7	4.1	1	23	148	171	148	171	0.95
5	17	0.00077	0.12	13.9	4.3	1	21	181	201	181	202	0.96
6	17	0.055	8.6	8.1	6.8	1	23	210	233	210	233	0.96
7	17	7.6	1.2e+03	1.3	0.4	1	8	789	796	789	806	0.88
8	17	0.00015	0.024	16.1	2.0	1	23	816	838	816	838	0.98
9	17	0.0008	0.13	13.9	5.1	1	22	869	890	869	890	0.96
10	17	0.00051	0.08	14.5	2.1	1	23	898	921	898	921	0.95
11	17	0.0085	1.3	10.6	5.2	1	21	931	951	931	952	0.97
12	17	0.034	5.4	8.7	3.1	1	23	1005	1027	1005	1027	0.97
13	17	2.1e-05	0.0034	18.8	1.9	1	21	1035	1055	1035	1056	0.96
14	17	0.047	7.4	8.3	3.4	1	21	1080	1100	1080	1101	0.94
15	17	0.0042	0.66	11.6	3.3	1	23	1109	1132	1109	1132	0.96
16	17	2.3	3.6e+02	3.0	5.4	1	21	1142	1162	1142	1163	0.95
17	17	0.0037	0.58	11.8	0.7	3	23	1173	1194	1171	1194	0.95

Sequence Information

Coding Sequence: aTGTTCCTTTCAGGATACTTCACTGGCACAATGCAAACGTTTCATTCTACCCCATTTGGACATAATTTAGAATTTGCAAATGAACTTCCATATATTCCGTGTTCATTAGATAAGCCTGATATAACACGGACCAATTCGACAATTGTAGAACCTGGTGATAGTTTGCTTTTTTTATGTCCAAAGTGTAATAAACAATACCATCACAAAGGTAACCTTCATAAACATCTACGTTATGAATGCGGAGTGGAACCACAATTTCATTGCAGCTTTTGtcctaaaaaatttaaacagaaGAGTAACCTTAAGGAACATTTGAGATGTCGCCATGATCCACTCAACATGGATGGTGATATCGCCACTTGTCCTCACTGTTCTCGTGTATTCAAATCGCAAAATTCACTAAAACGACATTTGATCTCATTATGTGGTGAATTAAAACGTTTCAAATGTCCTTATTGTGGTCATCGTTGCAATGAAAAATGGGATTTGGAACAGCATATGTATAATCGTCACACCAGACCAAATGATGCAAAGAAGGAACATCGCTGTACCCGTTGCAACAAATGCTATTATCAAAGAGCTGGATTGATTAAACATATGCGATACGAATGTGGAGTTGAACCACAATTCTGTTGTCCATTTtgcttatacaaatttaaacaaaaaattcataTGATTAAACATATTAGTAGAAAACATACTTATAGCAGATCTCCAGGAGAGAAAACAACTGCTAAGAAGATATCACCCAAATCAAAAACTCATCACGACAATATTCCACCATTGAAATCGGTGAAGACGGTCAACAAACCTCCTTCTTTAATTACTTtcgataaattaacattaataaaatctgAAAACAAAGCATTCCCTTTTAGCATTGAAAAAAATCCAACAAAATCGGATTCAAAAATCTCTCCACTGACTATTGAAAAATTACCACAAACTATTACCTCACAAACAAATGAGAAACCCCCTACTAAAATTGATGCTAAAACTGAAAATATTACTATTGAAAAATTACcttcatcaaaattaaaatcatctatacaaattgtaaaatctactattgaaaaaggtactCCCTCTAAATCTGAAccagaaaaatatattcttttaaaaattcaaccaTCACCCGATATATctgcaaatattttaaataaaaatatatcaaatgtaTCTCAAACCAAAACTGAACCTATGTGTAGTAAATGTTCTTCAAAAGTTGAATCTCAAGCTCTTACTCTAACTCTAACGCTTGATTCTAATACAGGATCTTTTCCAAAAATAACTTCCGATCAAGAAACTAAGGAAACACCAACAGATTTAATAAAAGAGCATCAAATTAAAATGgatcaaaaaattcaaaaaacaagtGAATCGACTGATAAATTATCATCAACAAGGCCTGAAACGAAATCACCAACTTTACAATTAAAACCAAACATTGAATCACCAGAATTAAAAACTTCCATTAAAATTTCTGGAGAGACTAATTCTGCTGGAGAGAAATCATCTATGGGAAAGATTTTAGATAAACCTCCACCATTGTTAACCCTCGGCAAATATTCGTCTCTTAAATCTACAAAAATATTTGATGATCCTAGTCCTGAAGTAATTGAAGATACTGAACTACCTTCCTCAAGTACCTCTAATACTattcctaaaattaaaattgtaaaaagcgAATCAACCCTTATGAAAGCagttgaaaaaaatagtttaaaaacatATGTTAAGTCAAATGTTCATAGAGAAAAATCTCCAAATATTGGTACGAAATCGTCtacaattgataaatataaagcaTCAACATCTGGATCATTAGAAACAGTCAAAACCGATGTTGAcgaaaaatcatcaaaatttgtaatatcACAAAAAAATGAAGACAAATTAAAAAAGGCTACACCAAGTTCAAGTGAAAaccaaataatgataaaatctgAAAAAGATGAATCACCTAAAAAAGGAAAACTTATAATCTCAAAAGAAATGACGATTTcatctaaattagaaaaattaaaagcaaaaaTAGATGATCCAAAAGACAAATTAATCTCTTTAAAAGGAAAAACTCCAATGAGTTCTCTGAAAACAGGATCAAAAGGAAAGAAATCTGTAAGAGTACGATTTTTAGATGATGTAAATACAAATGAACCTCTTCGAAAATCGAGACGTCCTTTAATATTAGCaccaaaatcaataaataagaaacaagaaaaaatatcatttaccaAACGGATGGAGGAAGGACTAGATACAAATAAACCAAAAGAATCTTTAGAAGAACCATCCACATCTAAAGTTCGTCCTCGATCACCCTCGCCACGGCCGCTCTTCAAAGTACCCAAAAAAGAAGAATATGTTTGTCCTAAATGCTCTAAAATTGATGATGATTATAACGAGCATTATCgtcatttaaaatatgaatgtgAGAAACAGTATAGCTGCTCTAATTGTTCGCGAACATTCATTGAGGAGTCCCATTTGAGAATGCATGAACGTATTCATAAAGGATCGATGCTTGATGCACCTGGTACATTCCATTaCAATTTTCTACAATTCGAGTATGTCGACACCAACATAGCTGACTCCGATGCATATGAATGTCACCGTTGCTATAAATTTTTCACTAACAAGAAATCATTCTTAAGACATTTGCGTTCATGTATTCAGCCGGAACGTCGTTTTCCCTGTCCACATTGCGATTATAAAGCGACACAACGTCAACATCTACAAGATCATATCCAGGCACGTCATCTACGTCCAAAAGGTGCTGTCGGCAAATATCAATGCCCTCAATGTGCCCGGCGTTATCATCATAAACATCATTTAATTAGTCATTTACGAAACGAATGTGGCATTGAACCCAAATTTCATTGCCCCTATTGCGTTTTCCGAAGGTATATCAGCAAGTCAAGGATTTTCTGCTCTACTTGTTTGCAGAATTTCTCtggtcaaaaagaaaaattcgagAGATCGCAATGTAACTGTAAATATATTCAACGATACCAATGTCACTCATGTCGATTTATTACATCTGATGCTGACCAATTTACTCGACATAAGATTAATCACCTGAAAGCTAGCAATTCACGATTTCGTTGTGACAAATGTGGCAAGAATTATATAACCCGTGATCATTTGGTTAGACATCAGAAATTTGAATGCGATGGGGATGTTAGATTGCTTTTAGATAGCTTCGAGATCGACGATGAAGATCAAGActatccatatttttgtgaaaaatgCTTTAAAGGTTTTTCTAATCATACCTCGATTCAACGGCATTCAAGATTTTGTAAAAATTCGGAGAAACAATTTAAATGCTCGTTGTGTAATTTCTCGACAAATTATAAAAGCTCATTGCAAGTGCATTTTCAAAGTAAACATTTACGGCCGAAAGATGCCAAAGGAGAGCATGTCTGTCCCAAATGTTGTCGGGCATACTATCACAAACATCAAATGATCAGTcatttaagaaatgaatgtggCATTGAACCCCAACAGATATGTCCATTTTGTCCTTTTCGTACaaaattaaaaggaaatttGAAGAAACATATTGCTCGTCGACACGCTTATGTTCCCAGTAGAgaataa
Protein Sequence: MFLSGYFTGTMQTFHSTPFGHNLEFANELPYIPCSLDKPDITRTNSTIVEPGDSLLFLCPKCNKQYHHKGNLHKHLRYECGVEPQFHCSFCPKKFKQKSNLKEHLRCRHDPLNMDGDIATCPHCSRVFKSQNSLKRHLISLCGELKRFKCPYCGHRCNEKWDLEQHMYNRHTRPNDAKKEHRCTRCNKCYYQRAGLIKHMRYECGVEPQFCCPFCLYKFKQKIHMIKHISRKHTYSRSPGEKTTAKKISPKSKTHHDNIPPLKSVKTVNKPPSLITFDKLTLIKSENKAFPFSIEKNPTKSDSKISPLTIEKLPQTITSQTNEKPPTKIDAKTENITIEKLPSSKLKSSIQIVKSTIEKGTPSKSEPEKYILLKIQPSPDISANILNKNISNVSQTKTEPMCSKCSSKVESQALTLTLTLDSNTGSFPKITSDQETKETPTDLIKEHQIKMDQKIQKTSESTDKLSSTRPETKSPTLQLKPNIESPELKTSIKISGETNSAGEKSSMGKILDKPPPLLTLGKYSSLKSTKIFDDPSPEVIEDTELPSSSTSNTIPKIKIVKSESTLMKAVEKNSLKTYVKSNVHREKSPNIGTKSSTIDKYKASTSGSLETVKTDVDEKSSKFVISQKNEDKLKKATPSSSENQIMIKSEKDESPKKGKLIISKEMTISSKLEKLKAKIDDPKDKLISLKGKTPMSSLKTGSKGKKSVRVRFLDDVNTNEPLRKSRRPLILAPKSINKKQEKISFTKRMEEGLDTNKPKESLEEPSTSKVRPRSPSPRPLFKVPKKEEYVCPKCSKIDDDYNEHYRHLKYECEKQYSCSNCSRTFIEESHLRMHERIHKGSMLDAPGTFHYNFLQFEYVDTNIADSDAYECHRCYKFFTNKKSFLRHLRSCIQPERRFPCPHCDYKATQRQHLQDHIQARHLRPKGAVGKYQCPQCARRYHHKHHLISHLRNECGIEPKFHCPYCVFRRYISKSRIFCSTCLQNFSGQKEKFERSQCNCKYIQRYQCHSCRFITSDADQFTRHKINHLKASNSRFRCDKCGKNYITRDHLVRHQKFECDGDVRLLLDSFEIDDEDQDYPYFCEKCFKGFSNHTSIQRHSRFCKNSEKQFKCSLCNFSTNYKSSLQVHFQSKHLRPKDAKGEHVCPKCCRAYYHKHQMISHLRNECGIEPQQICPFCPFRTKLKGNLKKHIARRHAYVPSRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -