Basic Information

Insect: Labia minor
Gene Symbol: -
Assembly: GCA_963082975.1
Location: OY720349.1:67521798-67524969[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 3.5e-06 0.00054 21.3 1.9 3 23 236 256 234 256 0.96

2 9 0.00025 0.04 15.4 5.9 1 20 262 281 262 284 0.94

3 9 0.00012 0.019 16.4 1.3 1 23 290 312 290 312 0.97

4 9 7.8 1.2e+03 1.3 1.9 2 23 315 339 315 339 0.85

5 9 0.019 3 9.5 1.3 2 23 357 378 356 378 0.97

6 9 1.5e-05 0.0024 19.3 0.3 2 23 385 406 384 406 0.97

7 9 0.016 2.6 9.7 3.4 3 23 414 435 412 435 0.91

8 9 2.2e-05 0.0034 18.8 4.9 1 23 441 463 441 463 0.99

9 9 5.5e-08 8.6e-06 27.0 0.2 1 23 469 491 469 491 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	3.5e-06	0.00054	21.3	1.9	3	23	236	256	234	256	0.96
2	9	0.00025	0.04	15.4	5.9	1	20	262	281	262	284	0.94
3	9	0.00012	0.019	16.4	1.3	1	23	290	312	290	312	0.97
4	9	7.8	1.2e+03	1.3	1.9	2	23	315	339	315	339	0.85
5	9	0.019	3	9.5	1.3	2	23	357	378	356	378	0.97
6	9	1.5e-05	0.0024	19.3	0.3	2	23	385	406	384	406	0.97
7	9	0.016	2.6	9.7	3.4	3	23	414	435	412	435	0.91
8	9	2.2e-05	0.0034	18.8	4.9	1	23	441	463	441	463	0.99
9	9	5.5e-08	8.6e-06	27.0	0.2	1	23	469	491	469	491	0.98

Sequence Information

Coding Sequence: atgacaaaaaataaaaataaatgtgctGCAGTTACTTGTAATAATAGAAGATGTGATAATACatctgaaaattatttatcttttcacaAATTTCCAAAAGACTTAGAaaggtGTAAAAAATGGATTATGAATTGTGGAAGATTTGATTTATTGGATAgacctttattaaaaatacggCGAAACTACTCATTATGTGGTGAACATTTTGAACAACATTGCTATATGAATTCTCTTCGTCGTAATTTAGTTTATGATGCTGTACCTACAATCTTTCAGCATTCAGAACGACCAGTTACTTCTGAACAGCAAGTGAATGAATTAAGATCAGTAAATGATGTAATTAATCAGGAACCTAAAAAAGATATAGCTTTATTTGAAGATACATTTGTGACATCACCCGAAACTTCTGAGTTTACCATTCGTCTTAGCTGTACGCCTGATATTCTCGATACCCCATTACCTCTTTTGGAGACCCCTTTAGAAATTGAACAAAAAGTGAACATTTTTTCAGAGGAAGAACTTGCAGAGAATGAATTATTAGCAAAAGAAATGTTAGAATCAAGCAAAAGCAATGATATAGATTTGACCGATGACTTTTTAACAGACACCAATGAAagttatttttactttcataaaAAATCTCATGCTGATCTACAAAATGAATTACAAGTTGAAGAAAAAGAAGCCTCAGATCCTACAATATGTTGTCAGGTGTGTGACAAAACATTCACTGCGAAATCTTTACTTCGTGATCATATGCTAACACATACGGGAGATAAACCCTTTATATGCCGTCATTGTAGTAAAGCCTTTCGTACGAACAGAAATCTAAAAAAGCATTTAGAATGTCATTTGAAACGAAAACAGTTTAAATGTAGTATCTGTCTAAAGGGTTTTACAACAAATGGTAATGCGAAACGACATTTCAATTTACATCGcgaaaaatgtttttgtataaTATGTCATGAGAATTTTCCAACTGTTGAATTAGCAATTCAACATCGAAGTCAAAATCACACGGAAGAAGAGATTATTGAAGCACACCGGAataaaaaactctttaaatcgAAATGTAAATTTTGCGATGAAATTGTTTCTTATAAAATGCTAACAAAACATCTAAGAACGATGCATAAAGATTATAAACCATGGGTTTGTAATTATTGTTCAAAGGGATTTATGAGTAAAGAACAATTGACAGTTCATGAAAGAGTCCATACAAATGAAAGACCATTTTTATGTAATTGTTGTCCTTCGAGATTCAAAACAAGATCCACTTTGAAATGGCATATATTATCTAAACATGAAAACATTTGGCCTTATTCATGTTCATATTGTGAACGTAAATTTAAGAGATTGCATACTTTAATTGTCCATAAAAGAACCcacacaggtgaaaaaccttatcCATGTTCAGTATGTGGTAGACCTTTTGCTAATAAAAGTGATATGATAAAACATATGAAGACTCATCTTAAAGATCAAGATCAATTTGTACAGCCGATTGCAATTGAATTACCTACATCTTCTTCGATAAATTTAGATACTCGAACAGAAAATGTAACAGatgatcaaatttcaaattctccaaaaaaattaattcaagctATAGGAATAGATACTGTTGAATTAGATTTGGATGATTTATTACCCTTAAATGTTCCTTTTATTGAAGAAGTGACAATTCgttaa
Protein Sequence: MTKNKNKCAAVTCNNRRCDNTSENYLSFHKFPKDLERCKKWIMNCGRFDLLDRPLLKIRRNYSLCGEHFEQHCYMNSLRRNLVYDAVPTIFQHSERPVTSEQQVNELRSVNDVINQEPKKDIALFEDTFVTSPETSEFTIRLSCTPDILDTPLPLLETPLEIEQKVNIFSEEELAENELLAKEMLESSKSNDIDLTDDFLTDTNESYFYFHKKSHADLQNELQVEEKEASDPTICCQVCDKTFTAKSLLRDHMLTHTGDKPFICRHCSKAFRTNRNLKKHLECHLKRKQFKCSICLKGFTTNGNAKRHFNLHREKCFCIICHENFPTVELAIQHRSQNHTEEEIIEAHRNKKLFKSKCKFCDEIVSYKMLTKHLRTMHKDYKPWVCNYCSKGFMSKEQLTVHERVHTNERPFLCNCCPSRFKTRSTLKWHILSKHENIWPYSCSYCERKFKRLHTLIVHKRTHTGEKPYPCSVCGRPFANKSDMIKHMKTHLKDQDQFVQPIAIELPTSSSINLDTRTENVTDDQISNSPKKLIQAIGIDTVELDLDDLLPLNVPFIEEVTIR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00849870;
90% Identity: iTF_00849870;
80% Identity: iTF_00849870;