Lmin029317.1
Basic Information
- Insect
- Labia minor
- Gene Symbol
- Zbtb41_1
- Assembly
- GCA_963082975.1
- Location
- OY720349.1:16271344-16276296[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 6e-06 0.00094 20.6 1.1 1 23 168 190 168 190 0.97 2 15 0.0003 0.047 15.2 1.2 3 23 198 218 196 218 0.96 3 15 9.8e-05 0.015 16.7 0.2 1 23 340 362 340 362 0.98 4 15 0.024 3.8 9.2 0.2 1 23 368 391 368 391 0.95 5 15 8.5e-06 0.0013 20.1 1.7 1 23 422 444 422 444 0.98 6 15 2.6e-05 0.0041 18.6 0.2 1 23 454 476 454 476 0.97 7 15 0.00026 0.042 15.4 1.2 2 23 483 505 483 505 0.97 8 15 5.6e-05 0.0088 17.5 3.2 1 23 512 534 512 534 0.97 9 15 0.00012 0.019 16.5 5.3 1 23 540 562 540 562 0.98 10 15 0.00086 0.14 13.8 0.3 2 23 568 589 567 589 0.96 11 15 0.0006 0.095 14.3 2.2 1 23 598 620 598 620 0.97 12 15 0.00085 0.13 13.8 0.1 3 23 628 648 626 648 0.97 13 15 8.8e-06 0.0014 20.0 0.2 1 23 654 676 654 677 0.95 14 15 0.0017 0.27 12.8 1.1 1 23 691 713 691 713 0.96 15 15 0.00074 0.12 14.0 0.1 1 20 1087 1106 1087 1109 0.94
Sequence Information
- Coding Sequence
- atGGCACAAATAACCAAAATTGAAGATTTGCCCCTGAATTGGGGTGAAGTAGAGCCAGCTGAAACGGAAATAATATGCGACGTTGATGATAATGAATGTGTTATTTTTGAAACGAGTGATCAAAATGCAACCAATGACACATATCATCATGAAGAGTCAattcctaataataatataatctatccAGATGTTGGTACTAATGGAAATAATCCTAACGATTGTGTAATTTATTTACCAGAAGAACAGGCTTCCCAAAGTTTTACTAATGATACTGGATCGTCTACAAACAATCAAGTTATACAATATCAATTTCCCGAAAACGAATATTTGGATATCCAAGTCACTGAAGAAGTTGTCAGTGGAGTTTGGGACAATGGTCAGGACGGTGTCAGTGATAACCTAACACTTCCAGGGGATGTAAAACTTGTATTGAATCAATTGTGGGAGGATGAAGTTGAAATTCCATTACCACAGGATCAAGATTCATATGCATCCCGTCCATTTCCTTGTGACTTTTGTAATAGACGTTTTAGTAAAAAAGCAAATCTTATGAATCATATGGTAAGCCATCAAGTGGATCGTCCACATTTATGTAATCTTTGTGGGGCACGTTATAGACGCAAACTTGAATTAATTTCGCATATGAAAATCCATGCATTTGTCCCTGGCAAAGAAACTGTAAGTgaggatgaagaagaagaagaagaagaagaagaagatgatgatgatgaagagaATGATGTTTCTGAATTACCTGATAtagaacataaaataaaaagaacaaaaaataaatcaaaacgtggaAGAAAAAgtcttaatcataataataaatataataatgaaaattttatgaataataatagtacaaataaaagttataagTATTCTAAAAAACATTCTAATTTTTCCCATCATTATGATTCGGATAAATTGGATTTAGATCCTTTGGAAATACCTGAGGCATCGACATCAGAGAGTTTAGAGCACCGTTGGCCAATAACGGATCCATCACGACCATATGTCTGTCAGCATTGTGGTGTTGGATTTGCAAGAGAGAAAGCATTAATCTCACATTCGAGAATCCACGCTGGTGACAGCCCCTACGAATGTAATACATGTGGAGAAATGTTTTGGGATGTAACTATGTTAAAAGATCATGCCCAATCGAAACATGGCGTAcgtttaacattaaataatgttaatacaaaACAAGAAGATGAAGACTACTATCCCAATGAAGAAACCTCTGaagattataatgaattttattgtgATGTTTGTGGAAATGTATTTCATCGATGGGATTTACTTAAACGACATAAAagaGTTCATATGAAATTCGATGCAATTGATTCCCCTTATTTTTGTGAAATGTGTGATGAAGCATTTACTAATCAAGAACAATATATGGCTCATGTAGAAACACATCCACAACAAAAAGAAAATCGTTGTATGATTTGTGGCGAATGTTTCATTGATACAGATACTCTTGCCCAACATGTACGTAAAAAACATCCAAAAGATTTACGCCCATATGCATGTACTTATTGTGGTAAATTATGTAAAAGTAAACAAtccttaaaaaaacatatttctgtACATTCAtctgataaaatatattcatgtaCGGAATGTGGAAAACGTTTTCATAGTCATCCACGTTTAAAAAGgcATATGCTCTCTCATCGCGATAAAGAAGTCACATGCGACGAATGTGGGAAAATATTCCCAGATGGCAGAGCATTACTTAATCATCGACATAgtcataataaagataatagttCAAGACAATTTCATTGTTTTGAATGTGACAAAACATTTGGAAGTCGAAGTAGTCAACAAATTCATGCacgaattcatacaggtgaacgACCATATGGTTGTCGATATTGCTGGAAAGCTTTCGCTGATGGCGGAACATTACGCAAACACGAAcggattcatacaggagaaaagccctATGCTTGCCCTATATGTCCTAGGGCTTTTAATCAAAGggttgTATTACGTGAACATATTCGTTCTCATCATTCTGGTCCAGATGTTGGTGGTGGTACACATTCTCCACTTTTCGTATGTCGAGTGTGTTCAGGAACATTTTCCCGATCACAAGATTTATGTCAACATTTGATTGCTCATAGTGATGAGAATACTGCCAAAAATCGTACACCACGATTTGGGCAAcgtaaatataaaagaagaaagcGATTAAATAATCATGAATTGAACTTAATTACAGTGAAAATGGACCCGGATGATAGTCTTCCGAACGACTTCAATGATTCTTACTCCAGTAATTATCATAATGATAGAATGGAGGATTACGACGATTCGGATGATGATTATGGTAAGAAGAAAACGAAACGCAAGAGCAAATCAAGAACCTCGCGACAACATGTAAGTGATGATTTCGAATCGGTTGTTAAATCATTTGAATCCGTGAtggaaaatttcaattcaattgttGATAGTTCAAAATCGGAAGCAAGGAAAGCGAAATTGAAACGGAAAAACCATCGGATGAAAAAGTATGAGCAATTGGATGTGGATgaagaacaacaacaacaacaacctcaGGCTACCAGTTCAGCATCTCCAATCAAATCTCCTTCCAAAATCGCCTCTTTTGCAAGTGGGggatttataaaaagtaatcgACCAATTGGAGAAGGGAGAATACGACCAAGAACAAAAAATGTTACATTAAGTACACTTGCAGCATTAAAGGCGGTTAATGTCATTACTCCACGTGACCCATCAGCTGAACAAATCATACGCGGTGGACCACGTACAAAAAATGTGAATTACCATAATGTAAAAATGGTGAAATTAGAACCAGCCACATTTGACGATTATAAACAACCACCTCTAAAACCAACAACACCACCATTAGAAATACCTCCATCCCCACCGCCATCTATTCATCTTCAATCTCCTACATCAATAAGTAATCAACCATCAACGAAAATACAACTTCCTCCCTTCATTGGTAAAGTCGAAGTGGAGGATGGTGTCGTTGATATGACAACAGATGATCAAATTGAATATAACCACATTGAAGAGAAGCAAAGTCAATCACCAACAACTAAAACAACAACAGCTACAACATCTGATGATAATGAAAAAcataaccaaatactatgtgagACTAATAATCTTTTAGATATTAAACCAATGCAATTATTAAAtggtgaaaagaaaaataaaacaaaaaatgacaAATCAAATGATGTTGATACATCATTAGTGAAAGTTGAATATAAATGTGAAATGTGCAGTGAAACATTCACAAAAAGAGCAGATTTACTAATTCATGTGcccattcatatttaa
- Protein Sequence
- MAQITKIEDLPLNWGEVEPAETEIICDVDDNECVIFETSDQNATNDTYHHEESIPNNNIIYPDVGTNGNNPNDCVIYLPEEQASQSFTNDTGSSTNNQVIQYQFPENEYLDIQVTEEVVSGVWDNGQDGVSDNLTLPGDVKLVLNQLWEDEVEIPLPQDQDSYASRPFPCDFCNRRFSKKANLMNHMVSHQVDRPHLCNLCGARYRRKLELISHMKIHAFVPGKETVSEDEEEEEEEEEDDDDEENDVSELPDIEHKIKRTKNKSKRGRKSLNHNNKYNNENFMNNNSTNKSYKYSKKHSNFSHHYDSDKLDLDPLEIPEASTSESLEHRWPITDPSRPYVCQHCGVGFAREKALISHSRIHAGDSPYECNTCGEMFWDVTMLKDHAQSKHGVRLTLNNVNTKQEDEDYYPNEETSEDYNEFYCDVCGNVFHRWDLLKRHKRVHMKFDAIDSPYFCEMCDEAFTNQEQYMAHVETHPQQKENRCMICGECFIDTDTLAQHVRKKHPKDLRPYACTYCGKLCKSKQSLKKHISVHSSDKIYSCTECGKRFHSHPRLKRHMLSHRDKEVTCDECGKIFPDGRALLNHRHSHNKDNSSRQFHCFECDKTFGSRSSQQIHARIHTGERPYGCRYCWKAFADGGTLRKHERIHTGEKPYACPICPRAFNQRVVLREHIRSHHSGPDVGGGTHSPLFVCRVCSGTFSRSQDLCQHLIAHSDENTAKNRTPRFGQRKYKRRKRLNNHELNLITVKMDPDDSLPNDFNDSYSSNYHNDRMEDYDDSDDDYGKKKTKRKSKSRTSRQHVSDDFESVVKSFESVMENFNSIVDSSKSEARKAKLKRKNHRMKKYEQLDVDEEQQQQQPQATSSASPIKSPSKIASFASGGFIKSNRPIGEGRIRPRTKNVTLSTLAALKAVNVITPRDPSAEQIIRGGPRTKNVNYHNVKMVKLEPATFDDYKQPPLKPTTPPLEIPPSPPPSIHLQSPTSISNQPSTKIQLPPFIGKVEVEDGVVDMTTDDQIEYNHIEEKQSQSPTTKTTTATTSDDNEKHNQILCETNNLLDIKPMQLLNGEKKNKTKNDKSNDVDTSLVKVEYKCEMCSETFTKRADLLIHVPIHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -