Basic Information

Insect: Labia minor
Gene Symbol: -
Assembly: GCA_963082975.1
Location: OY720344.1:1273218-1274918[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.47 74 5.1 1.6 1 21 61 80 61 81 0.88

2 16 0.01 1.6 10.4 0.1 1 23 90 112 90 112 0.96

3 16 0.00011 0.018 16.6 0.1 1 23 118 140 118 140 0.97

4 16 0.0042 0.67 11.6 0.0 2 23 146 167 145 167 0.96

5 16 0.00064 0.1 14.2 3.6 1 21 173 193 173 194 0.91

6 16 1.4e-06 0.00022 22.5 1.0 3 23 200 220 199 220 0.97

7 16 0.034 5.4 8.7 0.6 1 23 226 248 226 248 0.95

8 16 6.2e-07 9.8e-05 23.7 1.8 1 23 254 276 254 276 0.98

9 16 0.021 3.3 9.4 0.1 3 23 283 303 281 303 0.96

10 16 9.4e-06 0.0015 19.9 4.2 1 23 329 351 329 351 0.98

11 16 2.3e-05 0.0036 18.7 2.0 1 23 357 379 357 379 0.98

12 16 0.0016 0.26 12.9 1.6 1 23 385 407 385 407 0.96

13 16 9.6e-05 0.015 16.8 5.7 1 23 413 435 413 435 0.99

14 16 2.7e-06 0.00042 21.7 0.7 1 23 441 463 441 463 0.95

15 16 2.6e-07 4e-05 24.9 0.6 1 23 469 491 469 491 0.97

16 16 0.0065 1 11.0 2.3 1 21 500 520 500 521 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.47	74	5.1	1.6	1	21	61	80	61	81	0.88
2	16	0.01	1.6	10.4	0.1	1	23	90	112	90	112	0.96
3	16	0.00011	0.018	16.6	0.1	1	23	118	140	118	140	0.97
4	16	0.0042	0.67	11.6	0.0	2	23	146	167	145	167	0.96
5	16	0.00064	0.1	14.2	3.6	1	21	173	193	173	194	0.91
6	16	1.4e-06	0.00022	22.5	1.0	3	23	200	220	199	220	0.97
7	16	0.034	5.4	8.7	0.6	1	23	226	248	226	248	0.95
8	16	6.2e-07	9.8e-05	23.7	1.8	1	23	254	276	254	276	0.98
9	16	0.021	3.3	9.4	0.1	3	23	283	303	281	303	0.96
10	16	9.4e-06	0.0015	19.9	4.2	1	23	329	351	329	351	0.98
11	16	2.3e-05	0.0036	18.7	2.0	1	23	357	379	357	379	0.98
12	16	0.0016	0.26	12.9	1.6	1	23	385	407	385	407	0.96
13	16	9.6e-05	0.015	16.8	5.7	1	23	413	435	413	435	0.99
14	16	2.7e-06	0.00042	21.7	0.7	1	23	441	463	441	463	0.95
15	16	2.6e-07	4e-05	24.9	0.6	1	23	469	491	469	491	0.97
16	16	0.0065	1	11.0	2.3	1	21	500	520	500	521	0.94

Sequence Information

Coding Sequence: ATGAAAGTTAATCAGGGTCATTTAGAAATCGAGAATGATAATAGTAAAGATGCGAGTGTTCATTCAATGATGGATATCGATTTAACAAATCCATCGGATCCAATTGAAATTGTTATTAGTCGTAAACGAATAGCCGATTTTAAAAATGTTGCAATTGAAACAAGAACTACAAATGGCAATTATTTTTGTACCGGTTGTGGAATCTTTTGTACGAATGATGAAATGGCAAAACATGTATGCGTTCCAATGATGAAagagaataatatatacatttgtctTTTTTGTAAACGTGATTTCCCTACAATTGATTTATTACGGGAACATgaagaaattcatataaatGATCAAATTTTCGTTTGTACAAAATGTGATGAGCCGTTTGGACGTAGCCAAGATCTTGAAATACATGAATCAAGCCATTCAGAAAGTTGTTGGCCGTGTGCACAATGCAATGCTCTTTTCCCTGATCAGACTAGTTTAGAGGTgcatttaaatattcatgataAGAATAAACCATTCCTTTGTGATACTTGCGGCAAATGTTTTCCAGATGAGAATGATTTAAAAACTCATCGAtgcaaaattgaaattgaaatttgtgaaatttgtaATAAAGCATTTAAATCGAAAATTCATTTACGTTCTCATATGATCGTACATAATTCTGGGACAACATTTCCATGTTTACATTGTCCACGAATTTTCTTATCGAAAGAGCGTTTGAAACAACATGAGGCAATCCATTCGAATATTCGACCACATCAATGCTCCATTTGCTCAATGAGTTTCATACGAAAGggcaatttaattaaacatattaaaagtCATTCTGGGACAAAGGACGCTTGCAATATATGCCTTTTACAATTCAATACGGAAACGGAACTTGAGGAGCATAAATCGATTCATAGTCCCGAGGAGATTGCATTGAGTCGTCAACGGGATGTAATGATAGCGGAAGTGTTAGCCGCAGCACAAAACGATTTCCATTGCAAAGAATGTACCAAAACATTCTCAAGTAAAATCCAATTAGATCAACATATTAAAACGCATTATCCGGATAAATCTTACGAGTGTACAGTCTGTTTCAAAAGGTTTCCACAAAAGTCGGCATTAAAATATCACAGTCGACAACATACAGGGGAGCGGCCCCACTCTTGTCAATTTTGTGGCAAAGGGTTCAGTTCGAAAATAGGTAAAGAAAGTCATGAACGAATCCATACTGGGGAGAAACCTTATAAATGTTCTGAATGTGGAACCTGTTTTCGTTGTACCGCCAATTTACGACAACATATGCTAACCCATTCCGATGAAAAGCCATTTCTTTGTCAAGtgtgtaataaattatttcgacGTCGAGACGGTTTACAAGTACATATGCGAATTCATACTGGCGAACGACCATTTGCCTGTCCAGTCTGTAATAAAAGTTTTACACAAAAAGGCGACATGATTAAACATACTAGATCCCATTCAAAACCGGCAAGAACAACTGATTTCGAATGTAGCGCTTGTGGACATTCATTTCCATCCAAAAAATTATTTCGTATCCATCGTTGCGAAGAGACAACTAACAATCCAAATAATCATTTTAGAAATATGCCAATTGCTACAGAAGAAATTGCTATTGCCTTGCCAGAAATAACAATTCCATCGGAGAATATACAAGAATTTAATACTAGAACAACATTTCaagtttaa
Protein Sequence: MKVNQGHLEIENDNSKDASVHSMMDIDLTNPSDPIEIVISRKRIADFKNVAIETRTTNGNYFCTGCGIFCTNDEMAKHVCVPMMKENNIYICLFCKRDFPTIDLLREHEEIHINDQIFVCTKCDEPFGRSQDLEIHESSHSESCWPCAQCNALFPDQTSLEVHLNIHDKNKPFLCDTCGKCFPDENDLKTHRCKIEIEICEICNKAFKSKIHLRSHMIVHNSGTTFPCLHCPRIFLSKERLKQHEAIHSNIRPHQCSICSMSFIRKGNLIKHIKSHSGTKDACNICLLQFNTETELEEHKSIHSPEEIALSRQRDVMIAEVLAAAQNDFHCKECTKTFSSKIQLDQHIKTHYPDKSYECTVCFKRFPQKSALKYHSRQHTGERPHSCQFCGKGFSSKIGKESHERIHTGEKPYKCSECGTCFRCTANLRQHMLTHSDEKPFLCQVCNKLFRRRDGLQVHMRIHTGERPFACPVCNKSFTQKGDMIKHTRSHSKPARTTDFECSACGHSFPSKKLFRIHRCEETTNNPNNHFRNMPIATEEIAIALPEITIPSENIQEFNTRTTFQV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00090622;
90% Identity: -
80% Identity: -