Basic Information

Insect: Labia minor
Gene Symbol: B0310.2_1
Assembly: GCA_963082975.1
Location: OY720350.1:967430-974397[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1.4e-07 2.3e-05 25.7 0.8 1 23 180 202 180 202 0.99

2 12 7.3e-06 0.0012 20.3 0.1 1 23 207 229 207 229 0.97

3 12 5.4e-07 8.6e-05 23.8 0.3 1 23 235 257 235 257 0.96

4 12 4e-08 6.4e-06 27.4 2.8 1 23 263 285 263 285 0.98

5 12 8.8e-08 1.4e-05 26.3 1.5 1 23 291 313 291 313 0.99

6 12 2.2e-07 3.5e-05 25.1 0.6 1 23 319 341 319 341 0.98

7 12 0.0078 1.2 10.7 1.2 1 23 348 371 348 371 0.96

8 12 0.0044 0.69 11.5 0.2 1 23 509 532 509 532 0.97

9 12 3.4e-05 0.0053 18.2 1.1 1 23 537 561 537 561 0.97

10 12 2e-06 0.00032 22.0 4.3 1 23 567 589 567 589 0.97

11 12 0.00038 0.06 14.9 0.6 1 23 626 649 626 649 0.94

12 12 0.00025 0.039 15.5 1.0 3 23 657 678 656 678 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1.4e-07	2.3e-05	25.7	0.8	1	23	180	202	180	202	0.99
2	12	7.3e-06	0.0012	20.3	0.1	1	23	207	229	207	229	0.97
3	12	5.4e-07	8.6e-05	23.8	0.3	1	23	235	257	235	257	0.96
4	12	4e-08	6.4e-06	27.4	2.8	1	23	263	285	263	285	0.98
5	12	8.8e-08	1.4e-05	26.3	1.5	1	23	291	313	291	313	0.99
6	12	2.2e-07	3.5e-05	25.1	0.6	1	23	319	341	319	341	0.98
7	12	0.0078	1.2	10.7	1.2	1	23	348	371	348	371	0.96
8	12	0.0044	0.69	11.5	0.2	1	23	509	532	509	532	0.97
9	12	3.4e-05	0.0053	18.2	1.1	1	23	537	561	537	561	0.97
10	12	2e-06	0.00032	22.0	4.3	1	23	567	589	567	589	0.97
11	12	0.00038	0.06	14.9	0.6	1	23	626	649	626	649	0.94
12	12	0.00025	0.039	15.5	1.0	3	23	657	678	656	678	0.98

Sequence Information

Coding Sequence: atgaatttagaaaatattacatTTGATTTTCAACAAATATGTCGATTTTGTTTATCCCAAGGGGGCGTCATGTCAGCAATATTCCAAGAGGCCGATGGCTCCATTTCTCTCAGCACAAAAATTATGTCATGCATTCCATtacaaATGTCTCTTGAAGATGGATTGCCGGGGTTAATTTGCCATCGTTGTGTTTATCAAGTCGAACGTACAtatgaatttaaagaattatgcgAAACGTCCGATttaacattaagaaaatatttaagtttaaaggaGGTACAAAAGAAGGAGGATAAAATGTTAAAGCGAATTTCAGAAAATATGAATGGGaatgtaaatgaaaatcatttaaagCAACAAGAAAAACATGAAGGGGAGGGGATGGCAGAGGAAGAAGTGGAGTCTTTAGTAATGGTCGTTGATCCATCGAGTTTAGATTTTGAATCTGGATGTGATTCTACAGATTTAACAGAAGAGACAGAATCTGATGATCCATgtgcattattatttaatagccaaACAGATCCAGAGaccatttataaatgtaatatttgccCAAAGTCTTTTGGCCAAAAGGCCAATTTTATTCGACATCAATTAAGTCATACTGACAGGCCGTTTGATTGTCCTGAATGTGATAAGACATTTGGGGAAGGCTCCTCCTTGACAACCCATTTACGTATTCATACTGGTGAACGACCATATGCTTGTTCTATTTGCCCTAAAAATTTCACAAGTAGATCTGATTTACGTAAACATTTAGTGATCCATTCTGGGGAGAGGCCCTACGTATGCACATTATGTAAAAAAAGCTTTACAAGAAGCACcaatttgaaaaaacatttacGAATTCATTCAGGATTAAGGCCTTACACTTGTGGCCATTGCGACAAATCCTTTTCAGCAAATGGCGATTTACGAAGGCATATGCTCACTCATACAGGGCATAAACCCTTTAGTTGTTTCATCTGTGGAATGGCATTTGCCAGAAGAGATAAATTAATGAGACACATACGGACACATGGCGTTCAAGGAAAATGTTTCAAATGTTCCATTTGTGATGattccttttatatttttactgatTTACAAAAACATCTCGATAAAACACATaatatacgtgatgaaaattataaacCTGAGTCTGATGAAGAGGATGATGAGGTAGAGAATTGGCCAAACCAACGAACCTTAAAAAGGGGAAATGTGAAACCACAGGTGAAAGGAGGGGCTGGAAAAGAAGAGGAAGTAAATGGGAGACCAGTTGTAGTTTGTGTGAATCCATATCAAGTGGAGGGTCAAAGTCAATTGTTTAATGAACCATCGAAACAGGCAACTACAATTAATAATCAGAATACAACTACAACTACAACTGCTACTAGTCCGACTATTACTAGTGTTGGCGTTCTTCCTACTAAtagtactactactactactagtactactactactactactactactactactactagtagTGGTGATGATGAGGATGAGAATGAAGAAAATGTGAAGAATAGTCATTACTCATGTGATATTTGTCAGATTGTTTCATTTCCCACACGTGAATCTTTGGAGACACATCGAGATACCCACGGACGACGTCCCTATGCATGTCCTGTTAACAATTGTGTTAAAAGTTTTTTTCGTCGTCGCGAATTGCAACGGCATATGTTCACACATACAGGCGAGAAACCACACGAATGCGACATATGCAATAAACGTTTCTCACGGCGTGATAAATTGacacgacataaaaaaatacatttacgaGACAGTTTACTTATAAATTCTATTACGccgacaacaacaacaacacctcgagtaacaacaacaacaacaacaactcaAGCAACAACAAGATTATCTAACGTTTTTCAATGTAAAGAATGTAATACAAGTTACCAAACAAAATTAGAACTTGCCAGACATGCAAAGGCGATGCATCCAAAAAAGAAAATCCATGGATGCAATCAATGCAACAAGGCatttacaaaaatcaaaaaattagaaCAACATATAAACAAATTGCATGGAAATAATAAAACACTCTAG
Protein Sequence: MNLENITFDFQQICRFCLSQGGVMSAIFQEADGSISLSTKIMSCIPLQMSLEDGLPGLICHRCVYQVERTYEFKELCETSDLTLRKYLSLKEVQKKEDKMLKRISENMNGNVNENHLKQQEKHEGEGMAEEEVESLVMVVDPSSLDFESGCDSTDLTEETESDDPCALLFNSQTDPETIYKCNICPKSFGQKANFIRHQLSHTDRPFDCPECDKTFGEGSSLTTHLRIHTGERPYACSICPKNFTSRSDLRKHLVIHSGERPYVCTLCKKSFTRSTNLKKHLRIHSGLRPYTCGHCDKSFSANGDLRRHMLTHTGHKPFSCFICGMAFARRDKLMRHIRTHGVQGKCFKCSICDDSFYIFTDLQKHLDKTHNIRDENYKPESDEEDDEVENWPNQRTLKRGNVKPQVKGGAGKEEEVNGRPVVVCVNPYQVEGQSQLFNEPSKQATTINNQNTTTTTTATSPTITSVGVLPTNSTTTTTSTTTTTTTTTTTSSGDDEDENEENVKNSHYSCDICQIVSFPTRESLETHRDTHGRRPYACPVNNCVKSFFRRRELQRHMFTHTGEKPHECDICNKRFSRRDKLTRHKKIHLRDSLLINSITPTTTTTPRVTTTTTTTQATTRLSNVFQCKECNTSYQTKLELARHAKAMHPKKKIHGCNQCNKAFTKIKKLEQHINKLHGNNKTL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -